BAC Information

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BAC

Clone NameB6Ng01-202O13
Chromosome12 (Build37)
Map Location 91,847,206 - 91,994,566
singlet/doubletdoublet
Overlap geneDio2
Upstream geneNrxn3, LOC100039498, LOC100039287
Downstream geneLOC100039295, 4930544I03Rik, 4930534B04Rik, 5430427M07Rik, Tshr, Gtf2a1, Ston2, EG666955
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202O13.bB6Ng01-202O13.g
ACCGA023275GA023276
length9901,136
definitionB6Ng01-202O13.b B6Ng01-202O13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,994,051 - 91,994,566)(91,847,206 - 91,848,346)
sequence
gaattccttatagtgtattttctttcttttttcttttcttagatattttc
ttcatttacatttcaaatgctaccccgaaagtcccctatactcttccctc
gccctgatcccaatcccacccactcctgcttcctggccctggcattcccc
tgtactggggcaaatgatcttcacaagatcaagggcctctcttcccattg
atggctgactaggccatcctgcaactagagacacatcctgagtgaggtaa
ctcagtcacaaatgagcacacatgatattcactcactgataagtggatat
tagcacagaaacttagaatactcaagatacaattttcaaaacacatgaaa
ctcaagaagaaggaagacctccttctttttgttcctccttagaataggga
acaaaatccccatggaaggagttacagagacaaagtttggtgctgagatg
gaaggaaggaccatccagacactgccccacttggggatccatcccatata
caaccaccaaacccagacactattgcatatgccagcaagattttgctgac
aggaccctgatatagctatttcttgtgaggttatgccagtgcctggcaaa
tacagaagtggatgctcacagtcaactattggatggaatacagggcccct
aatgaaggagctagagaaagtacccaaggagcttaaaggggtctgtaacc
ctataggaggaacaacaatatgaactaagaagtgtattttcatatctcta
tccaaattctttttgacacccagacccatctctacctcactagcctgtca
ataataattatctgtataataatgattctccaatatgtgctgcccattta
tttatggtagtcccatccactggagcatggcccaccctatcacactgatg
gcacccttcaagtaagttgtctttcccctagaagtcatcagttgtccata
gatcctcagtggggagtggagggtgcactcttaaactttc

gaattccatactagatacttgcaaacattcaactgtaaatatgaggaaag
ggacaaagaaatactgaatcctgccaataagaaacatgcatttgttaaaa
cctcactctatgtctgccactgggttattgttactatttcacagtaaata
attcatgtttcactactttccctaacactcagtacttctctaccctgtct
cgaaagtaccccctttatggcagagcagctgcttttcctccatgtgacaa
aggtccacataggcttaactcatacagtatggctttctcttctccattat
cctccaggcagctgctgagactggcagcttgcccgacttggagatatttc
ttttttaattcttataaaaccatcctgaagtttcaaaagataataattca
tgattcctataaagtgaccaatatggccaagttgtatctgcaagattgcc
tgtttcagccactcttcgtgtattaaaacgtgcggagttgtttgtgcttg
ctccaagtctacagaatcacaggctgtgagggtgttcgaatgtgagatgt
gactgaataatagttctcaacagtccagtagttatccagcaaaactccac
agatgtgcacaagaggggcctgtgctggttaacaagcattttttgactat
ctactcaacatggaagattaagtgctgagataaataaaaataagggatgt
atcaaagtgcgtcatcctgaagggctttcatctaaactcagaatccatac
ctggggactggcatgggaatatttacaaagaaacatgggaaattagtata
tttcaccctggagtagggaagcttcaagagaatatgcaacagaggagctg
gcatgactgggcagggtccaacacaagtcttttggagggaaagaagtttg
ggtcccggcttgtttcatttggagccatgtgcttcatctgcacagtattt
ctgcattttaaaggtttaatttttttaaatctgccagtttgaaaatataa
ctttcaaaaacactgttggaaactagctctacattaacgctgagacttag
cttaagtgatttagtactagtgcaagagaactgacatttccccctgtgca
atgccgaggttactcttctagaaggctgtctaacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_91994051_91994566
seq2: B6Ng01-202O13.b_49_564 (reverse)

seq1  CTGGGTTTGGTGGTTGTATATGGGATGGATCCCCAAGTGGGGCAGTGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTGGTGGTTGTATATGGGATGGATCCCCAAGTGGGGCAGTGTCT  50

seq1  GGATGGTCCTTCCTTCCATCTCAGCACCAAACTTTGTCTCTGTAACTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTCCTTCCTTCCATCTCAGCACCAAACTTTGTCTCTGTAACTCCT  100

seq1  TCCATGGGGATTTTGTTCCCTATTCTAAGGAGGAACAAAAAGAAGGAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGGGATTTTGTTCCCTATTCTAAGGAGGAACAAAAAGAAGGAGGT  150

seq1  CTTCCTTCTTCTTGAGTTTCATGTGTTTTGAAAATTGTATCTTGAGTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCTTCTTGAGTTTCATGTGTTTTGAAAATTGTATCTTGAGTATT  200

seq1  CTAAGTTTCTGTGCTAATATCCACTTATCAGTGAGTGAATATCATGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTTTCTGTGCTAATATCCACTTATCAGTGAGTGAATATCATGTGTG  250

seq1  CTCATTTGTGACTGAGTTACCTCACTCAGGATGTGTCTCTAGTTGCAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTGTGACTGAGTTACCTCACTCAGGATGTGTCTCTAGTTGCAGGA  300

seq1  TGGCCTAGTCAGCCATCAATGGGAAGAGAGGCCCTTGATCTTGTGAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTAGTCAGCCATCAATGGGAAGAGAGGCCCTTGATCTTGTGAAGAT  350

seq1  CATTTGCCCCAGTACAGGGGAATGCCAGGGCCAGGAAGCAGGAGTGGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCCCCAGTACAGGGGAATGCCAGGGCCAGGAAGCAGGAGTGGGTG  400

seq1  GGATTGGGATCAGGGCGAGGGAAGAGTATAGGGGACTTTCGGGGTAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGGGATCAGGGCGAGGGAAGAGTATAGGGGACTTTCGGGGTAGCAT  450

seq1  TTGAAATGTAAATGAAGAAAATATCTAAGAAAAGAAAAAAGAAAGAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATGTAAATGAAGAAAATATCTAAGAAAAGAAAAAAGAAAGAAAAT  500

seq1  ACACTATAAGGAATTC  516
      ||||||||||||||||
seq2  ACACTATAAGGAATTC  516


seq1: chr12_91847206_91848346
seq2: B6Ng01-202O13.g_65_1200

seq1  GAATTCCATACTAGATACTTGCAAACATTCAACTGTAAATATGAGGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATACTAGATACTTGCAAACATTCAACTGTAAATATGAGGAAAG  50

seq1  GGACAAAGAAATACTGAATCCTGCCAATAAGAAACATGCATTTGTTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAAGAAATACTGAATCCTGCCAATAAGAAACATGCATTTGTTAAAA  100

seq1  CCTCACTCTATGTCTGCCACTGGGTTATTGTTACTATTTCACAGTAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTCTATGTCTGCCACTGGGTTATTGTTACTATTTCACAGTAAATA  150

seq1  ATTCATGTTTCACTACTTTCCCTAACACTCAGTACTTCTCTACCCTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGTTTCACTACTTTCCCTAACACTCAGTACTTCTCTACCCTGTCT  200

seq1  CGAAAGTACCCCCTTTATGGCAGAGCAGCTGCTTTTCCTCCATGTGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAGTACCCCCTTTATGGCAGAGCAGCTGCTTTTCCTCCATGTGACAA  250

seq1  AGGTCCACATAGGCTTAACTCATACAGTATGGCTTTCTCTTCTCCATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCACATAGGCTTAACTCATACAGTATGGCTTTCTCTTCTCCATTAT  300

seq1  CCTCCAGGCAGCTGCTGAGACTGGCAGCTTGCCCGACTTGGAGATATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGGCAGCTGCTGAGACTGGCAGCTTGCCCGACTTGGAGATATTTC  350

seq1  TTTTTTAATTCTTATAAAACCATCCTGAAGTTTCAAAAGATAATAATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATTCTTATAAAACCATCCTGAAGTTTCAAAAGATAATAATTCA  400

seq1  TGATTCCTATAAAGTGACCAATATGGCCAAGTTGTATCTGCAAGATTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCTATAAAGTGACCAATATGGCCAAGTTGTATCTGCAAGATTGCC  450

seq1  TGTTTCAGCCACTCTTCGTGTATTAAAACGTGCGGAGTTGTTTGTGCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAGCCACTCTTCGTGTATTAAAACGTGCGGAGTTGTTTGTGCTTG  500

seq1  CTCCAAGTCTACAGAATCACAGGCTGTGAGGGTGTTCGAATGTGAGATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGTCTACAGAATCACAGGCTGTGAGGGTGTTCGAATGTGAGATGT  550

seq1  GACTGAATAATAGTTCTCAACAGTCCAGTAGTTATCCAGCAAAACTCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAATAATAGTTCTCAACAGTCCAGTAGTTATCCAGCAAAACTCCAC  600

seq1  AGATGTGCACAAGAGGGGCCTGTGCTGGTTAACAAGCATTTTTTGACTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGCACAAGAGGGGCCTGTGCTGGTTAACAAGCATTTTTTGACTAT  650

seq1  CTACTCAACATGGAAGATTAAGTGCTGAGATAAATAAAAATAAGGGATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCAACATGGAAGATTAAGTGCTGAGATAAATAAAAATAAGGGATGT  700

seq1  ATCAAAGTGCGTCATCCTGAAGGGCTTTCATCTAAACTCAGAATCCATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGTGCGTCATCCTGAAGGGCTTTCATCTAAACTCAGAATCCATAC  750

seq1  CTGGGGACTGGCATGGGAATATTTACAAAGAAACATGGGAAATTAGTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGACTGGCATGGGAATATTTACAAAGAAACATGGGAAATTAGTATA  800

seq1  TTTCACCCTGGAGTAGGGGAAGCTTCAAGAGAATATGCAACAGAGGAGCT  850
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTCACCCTGGAGTA-GGGAAGCTTCAAGAGAATATGCAACAGAGGAGCT  849

seq1  GGCATGACTGGGCAGGGTCCAACACAAGTCTTTTGGAGGGAAAGAAGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGACTGGGCAGGGTCCAACACAAGTCTTTTGGAGGGAAAGAAGTTT  899

seq1  GGGT-CCGGCTTGTTTCATTTGGAAGCCATGTGCTTCAATCTGCACAGTA  949
      |||| |||||||||||||||||| ||||||||||||| ||||||||||||
seq2  GGGTCCCGGCTTGTTTCATTTGG-AGCCATGTGCTTC-ATCTGCACAGTA  947

seq1  TTTCTGCATTTTAAAGGTTTAATTTTTTTTAAATCTGCCAGTTTGAAAAT  999
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTTCTGCATTTTAAAGGTTTAA-TTTTTTTAAATCTGCCAGTTTGAAAAT  996

seq1  ATAACTTTCAAAAACACTGTTGGAAACTAGGCTCTACATAAACGCCTGGA  1049
      ||||||||||||||||||||||||||||| ||||||||| |||||   ||
seq2  ATAACTTTCAAAAACACTGTTGGAAACTA-GCTCTACATTAACGC--TGA  1043

seq1  GACTAAGCTTAAGTGAATTAGTACTAGTGGCAGGAG-ACTGACA-TTCCC  1097
      |||| ||||||||||| ||||||||||| ||| ||| ||||||| |||||
seq2  GACTTAGCTTAAGTGATTTAGTACTAGT-GCAAGAGAACTGACATTTCCC  1092

seq1  CCTGTGCAGTGCCAGAGTAACTC-TCTAGAAGCCTGTCTTAACCA  1141
      |||||||| ||||   || |||| |||||||| ||||| ||||||
seq2  CCTGTGCAATGCCGAGGTTACTCTTCTAGAAGGCTGTC-TAACCA  1136


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