BAC Information

Click to search

BAC

Clone NameB6Ng01-203A23
Chromosome12 (Build37)
Map Location 96,573,744 - 96,574,476
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC217786, LOC100039603
Downstream geneLOC667688, Flrt2, 1700019M22Rik, LOC100039664
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203A23.bB6Ng01-203A23.g
ACCGA023381GA023382
length184733
definitionB6Ng01-203A23.b B6Ng01-203A23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tctgtttagctatgtactccattttttattgttttttgtttgtttgttgt
tgttttttaatgttttgttttttattttcttgtctttttggttttttgtt
tgtttggttttggttttggtttttggagtttaacttcttgagctctttat
atattttggatattatctctccatcggatggggg

gaattcaccccgaatgctccttataaaaggacacatggctcaatatatgg
agatgtttaaagtgccataaaaacaaatttaccgctcttaaaaatactga
aaactctgaattaaagatctgaatctctcttaaatattgtcaacaaatat
aagaggcctaattactagggctgttgctagaagaggggctgggtggccaa
gtactcatactatgcttcacatagcctatgacttgacatcagggagattc
catacactcacatataaaataaaactattcacaagtctgtccattttgta
ccatgctgaaagccaaatagtaagtctgtgctgggagggcctctcctttg
cattgcaggatcttagatggcaccccctgactctactaaaggaatgttac
tcatattcagtggctcctttctgtttgaccatagcttctcagtgggaggc
aagccataccacttttggccagaatggcttggttaagagtcctcaatcta
tagagttgcagacccctttaactccatgggtactttctctagctcatgca
ttagggtaaacaacaatatgaactaaccagtcccccccagatctgtgtct
ctagttgcatatgtagcagaggatggcctagtcagccatcagtgggagag
acccttggtcttgcgaagatcatatgccccaggacaggggaattccaggg
ccaagaagtggaagtgggtgggatggggagcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_96573744_96574476
seq2: B6Ng01-203A23.g_64_796 (reverse)

seq1  CTGCTCCCCATCCCACCCACTTCCACTTCTTGGCCCTGGAATTCCCCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCCCATCCCACCCACTTCCACTTCTTGGCCCTGGAATTCCCCTGT  50

seq1  CCTGGGGCATATGATCTTCGCAAGACCAAGGGTCTCTCCCACTGATGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGCATATGATCTTCGCAAGACCAAGGGTCTCTCCCACTGATGGCT  100

seq1  GACTAGGCCATCCTCTGCTACATATGCAACTAGAGACACAGATCTGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGGCCATCCTCTGCTACATATGCAACTAGAGACACAGATCTGGGGG  150

seq1  GGACTGGTTAGTTCATATTGTTGTTTACCCTAATGCATGAGCTAGAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGGTTAGTTCATATTGTTGTTTACCCTAATGCATGAGCTAGAGAAA  200

seq1  GTACCCATGGAGTTAAAGGGGTCTGCAACTCTATAGATTGAGGACTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCATGGAGTTAAAGGGGTCTGCAACTCTATAGATTGAGGACTCTTA  250

seq1  ACCAAGCCATTCTGGCCAAAAGTGGTATGGCTTGCCTCCCACTGAGAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGCCATTCTGGCCAAAAGTGGTATGGCTTGCCTCCCACTGAGAAGC  300

seq1  TATGGTCAAACAGAAAGGAGCCACTGAATATGAGTAACATTCCTTTAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCAAACAGAAAGGAGCCACTGAATATGAGTAACATTCCTTTAGTA  350

seq1  GAGTCAGGGGGTGCCATCTAAGATCCTGCAATGCAAAGGAGAGGCCCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGGGGGTGCCATCTAAGATCCTGCAATGCAAAGGAGAGGCCCTCC  400

seq1  CAGCACAGACTTACTATTTGGCTTTCAGCATGGTACAAAATGGACAGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACAGACTTACTATTTGGCTTTCAGCATGGTACAAAATGGACAGACT  450

seq1  TGTGAATAGTTTTATTTTATATGTGAGTGTATGGAATCTCCCTGATGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATAGTTTTATTTTATATGTGAGTGTATGGAATCTCCCTGATGTCA  500

seq1  AGTCATAGGCTATGTGAAGCATAGTATGAGTACTTGGCCACCCAGCCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATAGGCTATGTGAAGCATAGTATGAGTACTTGGCCACCCAGCCCCT  550

seq1  CTTCTAGCAACAGCCCTAGTAATTAGGCCTCTTATATTTGTTGACAATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGCAACAGCCCTAGTAATTAGGCCTCTTATATTTGTTGACAATAT  600

seq1  TTAAGAGAGATTCAGATCTTTAATTCAGAGTTTTCAGTATTTTTAAGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGAGATTCAGATCTTTAATTCAGAGTTTTCAGTATTTTTAAGAGC  650

seq1  GGTAAATTTGTTTTTATGGCACTTTAAACATCTCCATATATTGAGCCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATTTGTTTTTATGGCACTTTAAACATCTCCATATATTGAGCCATG  700

seq1  TGTCCTTTTATAAGGAGCATTCGGGGTGAATTC  733
      |||||||||||||||||||||||||||||||||
seq2  TGTCCTTTTATAAGGAGCATTCGGGGTGAATTC  733


| Home | SequenceCutter | Blast | Download |