BAC Information

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BAC

Clone NameB6Ng01-203L19
Chromosome12 (Build37)
Map Location 11,204,901 - 11,205,347
singlet/doubletsinglet
Overlap genenone
Upstream geneNt5c1b, Rdh14, LOC238074, LOC100042308, EG668435, Kcns3, LOC628276
Downstream geneMsgn1, 5830483C08Rik, Smc6, Vsnl1, EG209550, LOC217390, LOC628327, LOC627110, LOC100043209
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203L19.bB6Ng01-203L19.g
ACCGA023868GA023869
length4411,177
definitionB6Ng01-203L19.b B6Ng01-203L19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tattctgtaactgaagagtgtctccctgagagtgagtcaggcagaagaag
ctcgcactggagggacagctttgggctcagaaacacagaaatggttttgg
gtgacaaaatgagagagctgggtcttaaggagcggttgcagccacacaaa
gaacatttctttgtgataccagggggaatggagctcctttgtctcattaa
taaaatagcttaagattattatacacgtgggagcacaaggacaattttat
tagtgtttaaagaaaacccatggtgggtgagctgaaatgttagctgtcac
tcagacgagaagagtggaagagagaagggacaacccatgccattttaaca
agcagccacagggcaggcagggagggagggaggctttagagaaagattaa
ggaagcccaaacagtgtgtgtgtgtgtgtgtgtgtgtgtgt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagtcactagcatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattggatgggatcacatggccccc
aatgaaggagctagagaaagtaccaaagaagctaaagggatctgcaaccc
tatagtggaacacattatgactaaccagtaccccggagctctgactctag
ctgcatatgcatcaaaagatgcctagtcgcatcactggaaagagaagcca
tgtacacgcaaccttaatgccagtacagggcatgcaggtcataaaggcaa
gtggtctggctaaggcctcatactcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_11204901_11205347
seq2: B6Ng01-203L19.b_44_490 (reverse)

seq1  ACACACACACACACACACACACACACACTGTTTGGGCTTCCTTAATCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACTGTTTGGGCTTCCTTAATCTTT  50

seq1  CTCTAAAGCCTCCCTCCCTCCCTGCCTGCCCTGTGGCTGCTTGTTAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAGCCTCCCTCCCTCCCTGCCTGCCCTGTGGCTGCTTGTTAAAAT  100

seq1  GGCATGGGTTGTCCCTTCTCTCTTCCACTCTTCTCGTCTGAGTGACAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGGTTGTCCCTTCTCTCTTCCACTCTTCTCGTCTGAGTGACAGCT  150

seq1  AACATTTCAGCTCACCCACCATGGGTTTTCTTTAAACACTAATAAAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTCAGCTCACCCACCATGGGTTTTCTTTAAACACTAATAAAATTG  200

seq1  TCCTTGTGCTCCCACGTGTATAATAATCTTAAGCTATTTTATTAATGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTGCTCCCACGTGTATAATAATCTTAAGCTATTTTATTAATGAGA  250

seq1  CAAAGGAGCTCCATTCCCCCTGGTATCACAAAGAAATGTTCTTTGTGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAGCTCCATTCCCCCTGGTATCACAAAGAAATGTTCTTTGTGTGG  300

seq1  CTGCAACCGCTCCTTAAGACCCAGCTCTCTCATTTTGTCACCCAAAACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAACCGCTCCTTAAGACCCAGCTCTCTCATTTTGTCACCCAAAACCA  350

seq1  TTTCTGTGTTTCTGAGCCCAAAGCTGTCCCTCCAGTGCGAGCTTCTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTGTTTCTGAGCCCAAAGCTGTCCCTCCAGTGCGAGCTTCTTCTG  400

seq1  CCTGACTCACTCTCAGGGAGACACTCTTCAGTTACAGAATAGAATTC  447
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTCACTCTCAGGGAGACACTCTTCAGTTACAGAATAGAATTC  447