BAC Information

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BAC

Clone NameB6Ng01-203L23
Chromosome12 (Build37)
Map Location 32,128,820 - 32,284,528
singlet/doubletdoublet
Overlap geneSlc26a3, Cbll1, Slc26a4, LOC100043531, Bcap29
Upstream geneTmem18, LOC100043055, Acp1, Sh3yl1, LOC629656, 9030611O19Rik, LOC668781, LOC100043065, LOC100043514, EG629667, LOC100043068, Lamb1-1, Dld, LOC668786
Downstream geneDus4l, LOC100043081, Gpr22, Hbp1, Prkar2b, Pik3cg, 2010109K11Rik, LOC100043548
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203L23.bB6Ng01-203L23.g
ACCGA023876GA023877
length1,127238
definitionB6Ng01-203L23.b B6Ng01-203L23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,128,820 - 32,129,961)(32,284,291 - 32,284,528)
sequence
gaattccagttacctaaaggcgttgacagtttaaggagctttgggaatct
aatcacagaggtaaaacaaaagcatggagaatcactagtgcgggtgtgat
ggttgaaacagaattgcggattccaggaaccaaacataatttttccccaa
ggatttctagaaagaaaagtgaaccgcgtgagtgaaaaacaaattaataa
aagcacttgaattcttaacaaaagcccgttgctcccatcaagtgcaggca
ggatgaatggcaagcgctgtccagctcagccgctcctagctcagctgctc
ctcggagctgcgagctgcggctgggtgattggctaggggctcatggcgtt
tatttcctgttaggtgtgagacagcagtgtcaggagagcagtgggcaaag
aggctggttcccaagctctcataggtctggacactttcttacacttccct
gactcttacactcgtgcaaacccctgccaccatgtgtcctgtgaggagga
agcaggctccactgtgcagcaacagatggccagagttcttgatcttgctg
caagtgggaggggcgttagagagccagctgtggtaacctcgggaaggggc
tagataagaagttattcctgctatcgctggcactgacaaaatctgaatga
atgaatgaatgaatgaatgaatagataaataaaatgctggttttgcagaa
agaaactataatgtctagaagaaaaaaagatgcactgtcaaagttttttc
ttaataagaaaaacaaaacaaaacaaaacaaaactagtaagcgtctgtga
acacctcagtagaaatgtgagcaaagcaaccaaacggaaatatttcccct
gtgcattcatagcctcatacaacagaaggaacatcccgagtcctcattgt
aaagttgactgctttggagcccttactgtagacagcttgccagacattca
cggcaccagagtcactgaccatagactgattctaagtgctaatgtccagc
gcagtgtgggcaactggcaggagacaaaaatcaacatacgggagatttac
tacagagcaagcagtacgctgaagagaagctctgatgtgagtactataag
caggtggggtagaaggttaggaagtgt
acataattcatctgtaacactgaaacaataataaagtcctgttcactgga
gtgttgagaactaaatgaaaggcagggtgcttggaacttttcctagctga
tacaaacaatcaagaaacctagacagctgttagctaagcatggtggcaca
tacccttaactccagcatttgggtatgcctcaaagaaaataagggagaaa
aggaggaagagagggaagaagagggggaggaaagaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_32128820_32129961
seq2: B6Ng01-203L23.b_33_1158

seq1  GAATTCCAGTTACCTAAAGGCGTTGACAGTTTAAGGAGCTTTGGGAATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTACCTAAAGGCGTTGACAGTTTAAGGAGCTTTGGGAATCT  50

seq1  AATCACAGAGGTAAAACAAAAGCATGGAGAATCACTAGTGCGGGTGTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAGAGGTAAAACAAAAGCATGGAGAATCACTAGTGCGGGTGTGAT  100

seq1  GGTTGAAACAGAATTGCGGATTCCAGGAACCAAACATAATTTTTCCCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAAACAGAATTGCGGATTCCAGGAACCAAACATAATTTTTCCCCAA  150

seq1  GGATTTCTAGAAAGAAAAGTGAACCGCGTGAGTGAAAAACAAATTAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTAGAAAGAAAAGTGAACCGCGTGAGTGAAAAACAAATTAATAA  200

seq1  AAGCACTTGAATTCTTAACAAAAGCCCGTTGCTCCCATCAAGTGCAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTTGAATTCTTAACAAAAGCCCGTTGCTCCCATCAAGTGCAGGCA  250

seq1  GGATGAATGGCAAGCGCTGTCCAGCTCAGCCGCTCCTAGCTCAGCTGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAATGGCAAGCGCTGTCCAGCTCAGCCGCTCCTAGCTCAGCTGCTC  300

seq1  CTCGGAGCTGCGAGCTGCGGCTGGGTGATTGGCTAGGGGCTCATGGCGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGAGCTGCGAGCTGCGGCTGGGTGATTGGCTAGGGGCTCATGGCGTT  350

seq1  TATTTCCTGTTAGGTGTGAGACAGCAGTGTCAGGAGAGCAGTGGGCAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCTGTTAGGTGTGAGACAGCAGTGTCAGGAGAGCAGTGGGCAAAG  400

seq1  AGGCTGGTTCCCAAGCTCTCATAGGTCTGGACACTTTCTTACACTTCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGTTCCCAAGCTCTCATAGGTCTGGACACTTTCTTACACTTCCCT  450

seq1  GACTCTTACACTCGTGCAAACCCCTGCCACCATGTGTCCTGTGAGGAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTACACTCGTGCAAACCCCTGCCACCATGTGTCCTGTGAGGAGGA  500

seq1  AGCAGGCTCCACTGTGCAGCAACAGATGGCCAGAGTTCTTGATCTTGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGCTCCACTGTGCAGCAACAGATGGCCAGAGTTCTTGATCTTGCTG  550

seq1  CAAGTGGGAGGGGCGTTAGAGAGCCAGCTGTGGTAACCTCGGGAAGGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGGAGGGGCGTTAGAGAGCCAGCTGTGGTAACCTCGGGAAGGGGC  600

seq1  TAGATAAGAAGTTATTCCTGCTATCGCTGGCACTGACAAAATCTGAATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAAGAAGTTATTCCTGCTATCGCTGGCACTGACAAAATCTGAATGA  650

seq1  ATGAATGAATGAATGAATGAATAGATAAATAAAATGCTGGTTTTGCAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGAATGAATGAATGAATAGATAAATAAAATGCTGGTTTTGCAGAA  700

seq1  AGAAACTATAATGTCTAGAAGAAAAAAAGATGCACTGTCAAAGTTTTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTATAATGTCTAGAAGAAAAAAAGATGCACTGTCAAAGTTTTTTC  750

seq1  TTAATAAGAAAAACAAAACAAAACAAAACAAAACTAGTAAGCGTCTGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAGAAAAACAAAACAAAACAAAACAAAACTAGTAAGCGTCTGTGA  800

seq1  ACACCTCAGTAGAAATGTGAGCAAAGCAACCAAACGGAAATATTTCCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTCAGTAGAAATGTGAGCAAAGCAACCAAACGGAAATATTTCCCCT  850

seq1  GTGCATTCATAGCCTCATACAACAGAAGGAACATCCCGAGTCCTCATTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTCATAGCCTCATACAACAGAAGGAACATCCCGAGTCCTCATTGT  900

seq1  AAGGTTGACTGCTTTGGAGCCCTTACTGTAGACAGCTTTGCCAGACATTC  950
      || ||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAAGTTGACTGCTTTGGAGCCCTTACTGTAGACAGC-TTGCCAGACATTC  949

seq1  ACGGCACCAGAAGTCACTGACCATAGACTGATTCTAAGTGCTAATGTCCC  1000
      |||||||||| |||||||||||||||||||||||||||||||||||| ||
seq2  ACGGCACCAG-AGTCACTGACCATAGACTGATTCTAAGTGCTAATGT-CC  997

seq1  AGCCGCAGTGTGGGCAACTGGCCAAGAGACAAAAATCAAACAAATACCGG  1050
      || |||||||||||||||||| || |||||||||||||   | ||| |||
seq2  AG-CGCAGTGTGGGCAACTGG-CAGGAGACAAAAATCA---ACATA-CGG  1041

seq1  GAGATTTACTACAAAGAGCAAGCCAAGTACGCTTGAAGAGAAAGCTCTGA  1100
      ||||||||||||  |||||||||  ||||||| ||||||| |||||||||
seq2  GAGATTTACTAC--AGAGCAAGC--AGTACGC-TGAAGAG-AAGCTCTGA  1085

seq1  TGTGAAGTACTATACAGCAGGTGGGGTAGGAGG-TAGGAAGTG  1142
      |||| ||||||||| |||||||||||||| ||| |||||||||
seq2  TGTG-AGTACTATA-AGCAGGTGGGGTAGAAGGTTAGGAAGTG  1126

seq1: chr12_32284291_32284528
seq2: B6Ng01-203L23.g_70_307 (reverse)

seq1  CTTTCTTTCCTCCCCCTCTTCTTCCCTCTCTTCCTCCTTTTCTCCCTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCCTCCCCCTCTTCTTCCCTCTCTTCCTCCTTTTCTCCCTTAT  50

seq1  TTTCTTTGAGGCATACCCAAATGCTGGAGTTAAGGGTATGTGCCACCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGAGGCATACCCAAATGCTGGAGTTAAGGGTATGTGCCACCATG  100

seq1  CTTAGCTAACAGCTGTCTAGGTTTCTTGATTGTTTGTATCAGCTAGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTAACAGCTGTCTAGGTTTCTTGATTGTTTGTATCAGCTAGGAAA  150

seq1  AGTTCCAAGCACCCTGCCTTTCATTTAGTTCTCAACACTCCAGTGAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAAGCACCCTGCCTTTCATTTAGTTCTCAACACTCCAGTGAACAG  200

seq1  GACTTTATTATTGTTTCAGTGTTACAGATGAATTATGT  238
      ||||||||||||||||||||||||||||||||||||||
seq2  GACTTTATTATTGTTTCAGTGTTACAGATGAATTATGT  238