BAC Information

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BAC

Clone NameB6Ng01-204J07
Chromosome12 (Build37)
Map Location 7,099,632 - 7,239,983
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043137, LOC238049, LOC100042118
Downstream geneLOC668380, EG668388, Apob, 1110057K04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204J07.bB6Ng01-204J07.g
ACCGA024484GA024485
length980779
definitionB6Ng01-204J07.b B6Ng01-204J07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,099,632 - 7,100,589)(7,239,215 - 7,239,983)
sequence
gaattcaaaacaagaacattctgttgaatcttaattctactattaagtag
ctctgtgatctggggaaatcagttatttgaacactaattccttcacaggc
ctcaaactggctcaaactggctaaggatagaatgcatttgggcgtgtaga
taggttttatatgtgataaggcactgtttaaatgctacatgttatttggc
agaagctaaatgttaaaatgacaatatataatttgtagtcaattagaact
gaatttaaattatggcaccatcattcagcatctttgagcatttagtaaat
catcagtattcgatcagttacttcattttaatactctgataaagtcacta
taaacattaaataaaataatattttaagtaccagatccacaactggatga
acaggagatattgggttgtccatatccattctttgctaattttttttttt
tggctttgcttttacaggggtctgtctaccatttcctgatctcaaaacct
accaggtagcagcttagcttgtaacattctggagatgctctactctaggg
aatacgcgaagtctaaggagacatcagctttagtcttggagttcgggata
gcatgcagaggctacacctttatttcctggctttagtcacaccccattgc
atatttttaaaggttttccttcaccacaaacaagtttctgtatgaaaagg
aaatgagtgcacagacacaagagcaatgaaaaattccattctctaattac
acaggtatgttcttgctcaatagctgtccttaggcccatgtagagatccc
acttgaggggctgggtcacttattgtcaattcttactgttaattgtgcta
tcaatcagaattaacatgtaagattcataagcagtatctctttagcagaa
tgtgttagtctaaacacaacccaaaaattttaccttttgttagaaaagtc
acaaccctattttcctagctggtttgtacc

gaattcagaagaatcatctcggctgaattgtcctgtattgcttttatatt
ttgcttttgaaaatgctctaaccacacctgaattcttcagagttagtatt
tgtctcataattctattgttatttataagatcctttcatgttctatgttt
atgatattatttactgggtttttgtttttataagtctgttattttgatct
taaaatacctctggctctagtcaaaattagatgattttttttttaaaaaa
gtaaacctaacttttggtcttcactaagagtaagtccatttgtattcata
ttggtaatggatataatcttattttctcaagttcttttacaaaaactact
gttaaggacataaagaaaagtatgcaaaagttatctctaatgttcagtgg
ctccttttgaagggattctcttcatgcaacagctacctaacttgagcaat
attgtttagtcaaagatcaccacctttggcttttttttgaaaggctgttt
tttcctttctggatgtatctatttgtcatacaaacataaaatccaactgg
ttttgtatgtttctggctcttttcttttatagtcttatctgttgctataa
ctttttccagttttagacttctactatcatttgatgtttatatttaagtt
gactgtgaacatgaatttctcacaggtgtatctttatatctaaaactaac
atttttttttaaaatttaaatttaaatgagtattaggagtcttaggaata
actactctttccaatataagttcatgtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_7099632_7100589
seq2: B6Ng01-204J07.b_47_1026

seq1  GAATTCAAAACAAGAACATTCTGTTGAATCTTAATTCTACTATTAAGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAACAAGAACATTCTGTTGAATCTTAATTCTACTATTAAGTAG  50

seq1  CTCTGTGATCTGGGGAAATCAGTTATTTGAACACTAATTCCTTCACAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGATCTGGGGAAATCAGTTATTTGAACACTAATTCCTTCACAGGC  100

seq1  CTCAAACTGGCTCAAACTGGCTAAGGATAGAATGCATTTGGGCGTGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACTGGCTCAAACTGGCTAAGGATAGAATGCATTTGGGCGTGTAGA  150

seq1  TAGGTTTTATATGTGATAAGGCACTGTTTAAATGCTACATGTTATTTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTTATATGTGATAAGGCACTGTTTAAATGCTACATGTTATTTGGC  200

seq1  AGAAGCTAAATGTTAAAATGACAATATATAATTTGTAGTCAATTAGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTAAATGTTAAAATGACAATATATAATTTGTAGTCAATTAGAACT  250

seq1  GAATTTAAATTATGGCACCATCATTCAGCATCTTTGAGCATTTAGTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTAAATTATGGCACCATCATTCAGCATCTTTGAGCATTTAGTAAAT  300

seq1  CATCAGTATTCGATCAGTTACTTCATTTTAATACTCTGATAAAGTCACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTATTCGATCAGTTACTTCATTTTAATACTCTGATAAAGTCACTA  350

seq1  TAAACATTAAATAAAATAATATTTTAAGTACCAGATCCACAACTGGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATTAAATAAAATAATATTTTAAGTACCAGATCCACAACTGGATGA  400

seq1  ACAGGAGATATTGGGTTGTCCATATCCATTCTTTGCTAATTTTTTTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGATATTGGGTTGTCCATATCCATTCTTTGCTAATTTTTTTTTTT  450

seq1  TGGCTTTGCTTTTACAGGGGTCTGTCTACCATTTCCTGATCTCAAAACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTGCTTTTACAGGGGTCTGTCTACCATTTCCTGATCTCAAAACCT  500

seq1  ACCAGGTAGCAGCTTAGCTTGTAACATTCTGGAGATGCTCTACTCTAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTAGCAGCTTAGCTTGTAACATTCTGGAGATGCTCTACTCTAGGG  550

seq1  AATACGCGAAGTCTAAGGAGACATCAGCTTTAGTCTTGGAGTTCGGGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACGCGAAGTCTAAGGAGACATCAGCTTTAGTCTTGGAGTTCGGGATA  600

seq1  GCATGCAGAGGCTACACCTTTATTTCCTGGCTTTAGTCACACCCCATTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCAGAGGCTACACCTTTATTTCCTGGCTTTAGTCACACCCCATTGC  650

seq1  ATATTTTTAAAGG-TTTCCTTCACCACAAACAAGTTTCTGTATGAAAAGG  699
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTAAAGGTTTTCCTTCACCACAAACAAGTTTCTGTATGAAAAGG  700

seq1  AAATGAGTGCACAGACACAAGAGCAATGAAAAATTCCATTCTCTAA-TAC  748
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAATGAGTGCACAGACACAAGAGCAATGAAAAATTCCATTCTCTAATTAC  750

seq1  ACAGGTATGTTCTTGCTCAATAGCTGTCCTTAGGCCCATGTAGAGATCCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTATGTTCTTGCTCAATAGCTGTCCTTAGGCCCATGTAGAGATCCC  800

seq1  ACTTGA-GGGCTGGGTCACT--ATGTCAATTCTTACTGTTAATTGTGCCA  845
      |||||| |||||||||||||   ||||||||||||||||||||||||| |
seq2  ACTTGAGGGGCTGGGTCACTTATTGTCAATTCTTACTGTTAATTGTGCTA  850

seq1  TC-ATCAGAA-TAACATGT-AGATTCAT-AGCAGAATCTC-TTAGCAG-A  889
      || ||||||| |||||||| |||||||| ||||| ||||| ||||||| |
seq2  TCAATCAGAATTAACATGTAAGATTCATAAGCAGTATCTCTTTAGCAGAA  900

seq1  TGTG-TAGTCT-AACACAACC--AAAAGTTTAC--TTTG-TAGAAAAGTC  932
      |||| |||||| |||||||||  |||| |||||  |||| ||||||||||
seq2  TGTGTTAGTCTAAACACAACCCAAAAATTTTACCTTTTGTTAGAAAAGTC  950

seq1  ACACCC---TTTTCCTAGCT-GTTTGTACC  958
      ||| ||   ||||||||||| |||||||||
seq2  ACAACCCTATTTTCCTAGCTGGTTTGTACC  980


seq1: chr12_7239215_7239983
seq2: B6Ng01-204J07.g_71_849 (reverse)

seq1  TTAC-TGAAC-TATATTGGAA--GGTAGTTA-TCCTAAGACTCCTAATAA  45
      |||| ||||| ||||||||||   ||||||| |||||||||||||||| |
seq2  TTACATGAACTTATATTGGAAAGAGTAGTTATTCCTAAGACTCCTAAT-A  49

seq1  CTCATTTAAATTTAAATTTT--AAAAAAATGTTAGTTTTAGATATAAAGA  93
      ||||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  CTCATTTAAATTTAAATTTTAAAAAAAAATGTTAGTTTTAGATATAAAGA  99

seq1  TACACCTGTGAGAAATTCATGTTCACAGTCAACTT-AATATAAACATCAA  142
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TACACCTGTGAGAAATTCATGTTCACAGTCAACTTAAATATAAACATCAA  149

seq1  ATGATAGTAGAAGTCT-AAACTGG-AAAAGTTATAGCAACAGATAAGACT  190
      |||||||||||||||| ||||||| |||||||||||||||||||||||||
seq2  ATGATAGTAGAAGTCTAAAACTGGAAAAAGTTATAGCAACAGATAAGACT  199

seq1  AT-AAAGAAAAGAGCCAGAAACATACAAAACCAGTTGGATTTTATGTTTG  239
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGAAAAGAGCCAGAAACATACAAAACCAGTTGGATTTTATGTTTG  249

seq1  TATGACAAATAGATACATCCAGAAAGGAAAAAACAGCCTTTCAAAAAAAA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACAAATAGATACATCCAGAAAGGAAAAAACAGCCTTTCAAAAAAAA  299

seq1  GCCAAAGGTGGTGATCTTTGACTAAACAATATTGCTCAAGTTAGGTAGCT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAGGTGGTGATCTTTGACTAAACAATATTGCTCAAGTTAGGTAGCT  349

seq1  GTTGCATGAAGAGAATCCCTTCAAAAGGAGCCACTGAACATTAGAGATAA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCATGAAGAGAATCCCTTCAAAAGGAGCCACTGAACATTAGAGATAA  399

seq1  CTTTTGCATACTTTTCTTTATGTCCTTAACAGTAGTTTTTGTAAAAGAAC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCATACTTTTCTTTATGTCCTTAACAGTAGTTTTTGTAAAAGAAC  449

seq1  TTGAGAAAATAAGATTATATCCATTACCAATATGAATACAAATGGACTTA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAAATAAGATTATATCCATTACCAATATGAATACAAATGGACTTA  499

seq1  CTCTTAGTGAAGACCAAAAGTTAGGTTTACTTTTTTAAAAAAAAAATCAT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGTGAAGACCAAAAGTTAGGTTTACTTTTTTAAAAAAAAAATCAT  549

seq1  CTAATTTTGACTAGAGCCAGAGGTATTTTAAGATCAAAATAACAGACTTA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTTGACTAGAGCCAGAGGTATTTTAAGATCAAAATAACAGACTTA  599

seq1  TAAAAACAAAAACCCAGTAAATAATATCATAAACATAGAACATGAAAGGA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACAAAAACCCAGTAAATAATATCATAAACATAGAACATGAAAGGA  649

seq1  TCTTATAAATAACAATAGAATTATGAGACAAATACTAACTCTGAAGAATT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAAATAACAATAGAATTATGAGACAAATACTAACTCTGAAGAATT  699

seq1  CAGGTGTGGTTAGAGCATTTTCAAAAGCAAAATATAAAAGCAATACAGGA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTGGTTAGAGCATTTTCAAAAGCAAAATATAAAAGCAATACAGGA  749

seq1  CAATTCAGCCGAGATGATTCTTCTGAATTC  769
      ||||||||||||||||||||||||||||||
seq2  CAATTCAGCCGAGATGATTCTTCTGAATTC  779


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