BAC Information

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BAC

Clone NameB6Ng01-204O04
Chromosome12 (Build37)
Map Location 18,142,315 - 18,143,079
singlet/doubletsinglet
Overlap geneLOC100042573
Upstream geneKcnf1, LOC100043299, Pdia6, Atp6v1c2, Nol10, LOC672501, Odc1, LOC100042522, LOC100042528, Hpcal1, EG668525, LOC673341, EG245297
Downstream geneLOC668539, LOC100043324, LOC636282, EG632781, LOC668541, LOC673160, 5730507C01Rik, EG668553, LOC668558, LOC100042641, LOC668568, LOC668570, EG668413
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204O04.bB6Ng01-204O04.g
ACCGA024708GA024709
length803766
definitionB6Ng01-204O04.b B6Ng01-204O04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccatgagttttatcatgaatgggtgttggattttg
tcaaatgctttctcagaatctaacgagatgatcatgtgatttttgtcttt
gagtttgtttatatagtggattacattgatggatttctgtatattaaacc
atccctgcatcgctggaatgaagcctacttggtcatgatggatgattgtt
ttgatgtgtgagaattttattgagtatttttgcatcgatgctcataaggg
aaattggtctgaagttcgctttctttgttgggtctttatgtggtttaggt
ctctgagtaactgtggtttcatagaatgaattctgtttctattttttgga
ataatttgaggagagttggaattaggtcttctttgaaggtctgatagaac
tctgcactaaatccatctggtcctgagggtttttttttttttttttggtt
gggagactattagtgactgcttctatttctttaggggaaatgggactgtt
aagatcattaatctgatcctgatttaactttggtacctgatatctgtcta
ggaagttgtccatttcatccaggttttccagttgagtatagcctttttta
gtaggatctgatggtgttttggattttcctcagtatctgttgttatgtct
cccttttcatttctgattttatttaattaggatactgtccctgtgcccct
ctcgttagtctgactaagggtttatcttatcttgttgaattttcctcaaa
gaaaccagttcctggtttgggttgattccttttaaatagtccttttttgt
ttc
gaattcagggggttctgaggctaatggtgggattggggagcaaaagggtg
ggttcctctccagccgggaagccagtatccccggttccactccacgccct
ctgcgtaatgttgctagaggtcatggcgggtgctgggtgggagccgggca
ccgcagctcgggagagggcgcgccctcgaaccccagcacctcccgaaggc
agactcaaggcggcgtcccacaggcactgacaggtccggagcgcacatcg
cccttttttctgtggcctccgcttcctggcagcgcggtggcggcaagtgc
cccgattggcggccagacctttgccccgccccgccccgcccctccctggc
ggacaccgctcttccccgccccccccccgtcccgcctctctccgcgggag
gccttcgggccagcggcttggtggcgcgcagtttaccctggctgtgcgcg
cccgcagagaacggggcatcggcgtctccgggagcacagcgggcagagct
gcggactgcacgcgcccctgctgccaccggccgtcccgcggtggctcccg
cgccctgcggcgacttccgagcccgcgcttctcctttgtccgaatccccg
agcggcggctgaggctgggtccgagcccgcgtcctgggcgactgaggcgg
cgacagtccgcgccccggcgccctggcgatgccggaactcgatctccgtg
tcggattcgtgctgaaactctttgaggactacaaggcgccacggcttcta
cctttcaccaagcgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_18142315_18143079
seq2: B6Ng01-204O04.g_66_831

seq1  GAATTCAGGGGGTTCTGAGGCTAATGGTGGGATTGGGGAGCAAAAGGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGGGTTCTGAGGCTAATGGTGGGATTGGGGAGCAAAAGGGTG  50

seq1  GGTTCCTCTCCAGCCGGGAAGCCAGTATCCCCGGTTCCACTCCACGCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCTCTCCAGCCGGGAAGCCAGTATCCCCGGTTCCACTCCACGCCCT  100

seq1  CTGCGTAATGTTGCTAGAGGTCATGGCGGGTGCTGGGTGGGAGCCGGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGTAATGTTGCTAGAGGTCATGGCGGGTGCTGGGTGGGAGCCGGGCA  150

seq1  CCGCAGCTCGGGAGAGGGCGCGCCCTCGAACCCCAGCACCTCCCGAAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAGCTCGGGAGAGGGCGCGCCCTCGAACCCCAGCACCTCCCGAAGGC  200

seq1  AGACTCAAGGCGGCGTCCCACAGGCACTGACAGGTCCGGAGCGCACATCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCAAGGCGGCGTCCCACAGGCACTGACAGGTCCGGAGCGCACATCG  250

seq1  CCCTTTTTTCTGTGGCCTCCGCTTCCTGGCAGCGCGGTGGCGGCAAGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTTTCTGTGGCCTCCGCTTCCTGGCAGCGCGGTGGCGGCAAGTGC  300

seq1  CCCGATTGGCGGCCAGACCTTTGCCCCGCCCCGCCCCGCCCCTCCCTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGATTGGCGGCCAGACCTTTGCCCCGCCCCGCCCCGCCCCTCCCTGGC  350

seq1  GGACACCGCTCTTCCCCGCCCCCCCCCCGTCCCGCCTCTCTCCGCGGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCGCTCTTCCCCGCCCCCCCCCCGTCCCGCCTCTCTCCGCGGGAG  400

seq1  GCCTTCGGGCCAGCGGCTTGGTGGCGCGCAGTTTACCCTGGCTGTGCGCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCGGGCCAGCGGCTTGGTGGCGCGCAGTTTACCCTGGCTGTGCGCG  450

seq1  CCCGCAGAGAACGGGGCATCGGCGTCTCCGGGAGCACAGCGGGCAGAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCAGAGAACGGGGCATCGGCGTCTCCGGGAGCACAGCGGGCAGAGCT  500

seq1  GCGGACTGCACGCGCCCCTGCTGCCACCGGCCGTCCCGCGGTGGCTCCCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGACTGCACGCGCCCCTGCTGCCACCGGCCGTCCCGCGGTGGCTCCCG  550

seq1  CGCCCTGCGGCGACTTCCGAGCCCGCGC-TCCCCTTTGTCCGAATCCCCG  599
      |||||||||||||||||||||||||||| || ||||||||||||||||||
seq2  CGCCCTGCGGCGACTTCCGAGCCCGCGCTTCTCCTTTGTCCGAATCCCCG  600

seq1  AGCGGCGGCTGAGGCTGGGTCCGAGCCCGCGTCCTGGGCGACTGAGGCGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGCGGCTGAGGCTGGGTCCGAGCCCGCGTCCTGGGCGACTGAGGCGG  650

seq1  CGACAGTCCGCGCCCCGGCGCCCTGGCGATGCCGG-ACTCGATCTCCGTG  698
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CGACAGTCCGCGCCCCGGCGCCCTGGCGATGCCGGAACTCGATCTCCGTG  700

seq1  TCGGAATTCGTGGCTGAGAC-CCTTGAGGACTACAAGGCGCCCACGGCCT  747
      |||| |||||| ||||| || | ||||||||||||||||| ||||||| |
seq2  TCGG-ATTCGT-GCTGAAACTCTTTGAGGACTACAAGGCG-CCACGGCTT  747

seq1  CTACC-TTCACCACGCGCT  765
      ||||| ||||||| |||||
seq2  CTACCTTTCACCAAGCGCT  766