BAC Information

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BAC

Clone NameB6Ng01-206C12
Chromosome12 (Build37)
Map Location 62,194,757 - 62,195,226
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665665, Ppia-ps12_475.1
Downstream geneLOC100040300, LOC665677, Nanog-ps2, Lrfn5, LOC665699, LOC665707, LOC100040403
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206C12.bB6Ng01-206C12.g
ACCGA025644GA025645
length1,248651
definitionB6Ng01-206C12.b B6Ng01-206C12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatagcgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacaac
agatgctggcgaggatgtggagaaagaggaactcctccattgttgttggc
attgcaagcttgtacaactactctggaaatcagtctggcagttcctcaga
aatttggacatagtactacccgaggatcccgcaatacttctcctgggcat
atatccagaagatgttccaaccggtaagaaggacacatgctccactatgt
tcttagcagccttatttataatagccagaagctggaaataatccatatgc
ccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgga
gtactactcagctattaaaaacaatgaatttatgaaattcctaggcaaat
gaatggacctggagggcatcatcctgagtgaggtaacccaatcacaaaag
aactcacacaaaatgtactcactgataagtggatattagcccagaaactt
agaatacccaagatataagatacaatttgttaagtgcatgtaactcaaga
agaacaaggaccaaagtgtggacactttgccccttcttagaactgggaac
aaaacacccatggaaggagatacagattcaaattttggagctgagatgaa
aggatggaccatctagagactgccatatccagggatccatcccataatca
gcttcctaacactgatacctttgcatacactagcaagattttgttgaaag
aacccagatatagctgtctcttgtgagactatgctggggcctagcaaaca
cagaagtggatgctcatagtcggctattggatggatcaaaggccccaatg
gaggagctagagaaagtacccaagaactaaagggatctgcaatcctatag
gtggaacaacattatgaactggattatagaaaatatgggtacattacaca
atgagtactactcagcagttaaaaacatgaaattctagcaaatgatggat
ctagggaaatcatcttgagtgacattaccatcctcaaagaaaccaccttg
attgcactcattgatacttatattggctgaactagactacaagaatacat
tgccaaaaccctgaacttcagccgagagcaagagatcctgagatatat

gaattccctcttggcactctacatccatttgggaataagaaagtattccc
aaattatgtgaacactttgccccttcttagaattgggaacaaaacaccca
tggaaggagttacagacacaagtttggagctgagatgaaaggatagacca
tctagagactgcctagtccggtgatccatcccataatcagcttccaaacg
ctgacaccattgcatatactagcaagattttgctaaaagaacccagatat
agctgtctcttgtgagactatgccggagcctagcaaacacagaagtggat
gctcacagtcagctattgaatggatcacagggccccccaatggaagagct
agagaaagtacccaaggagctaaagggatctgcaaccctataggtggaac
aacattatgaactaaccagtcccccctggagctcttgactctagctgcat
atgtatcaaaagatggcctagtcggccatcactggaaagagaggcccatt
ggacacgcaaactttataagcctcagtacaggggaacgccagagccaaaa
agtggaagtgggtgggtgggggagtgcgtgggggagcatgtagggaactt
tttgggaaagcatgggatatgtaaatgaaatatatactctaataaaaaaa
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_62194757_62195226
seq2: B6Ng01-206C12.g_244_718 (reverse)

seq1  TTTTTTTTATTAG-GTATTTAGCTCATTTACATTTCCAATGCTATACC-A  48
      ||||||||||||| |||| ||  |||||||||| ||| ||||| | || |
seq2  TTTTTTTTATTAGAGTATATATTTCATTTACATATCCCATGCTTTCCCAA  50

seq1  AAAGTCCCCCTTACCCACCCACCCCCACTCCCCTACCCACCCACTCCCCC  98
      ||||| |||   |  | ||| | | |||||||| ||||||||||| || |
seq2  AAAGTTCCCTACATGCTCCCCCACGCACTCCCCCACCCACCCACTTCCAC  100

seq1  CCTTTGGCCCTGGCGTTCCCCTGTACCGGGGCACACAAAGTCTGCGTGTC  148
        |||||| ||||||||||||||||| | |||  | ||||| ||||||||
seq2  TTTTTGGCTCTGGCGTTCCCCTGTACTGAGGCTTATAAAGTTTGCGTGTC  150

seq1  CAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACA  200

seq1  TATGCAGCTAGAGTCAAGAGCTC--AGGGGTACTGGTTAGTTCATAATGT  246
      |||||||||||||||||||||||   |||| |||||||||||||||||||
seq2  TATGCAGCTAGAGTCAAGAGCTCCAGGGGGGACTGGTTAGTTCATAATGT  250

seq1  TGTTCCACCTATAGGGTTGAAGATCCCTTTAGCTCCTTGGGTACTTTCTC  296
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTC  300

seq1  TAGCTCCTCCATT-GGGAGCCCTGTGATCCATCCATTAGCTGACTGTGAG  345
      |||||| |||||| ||| |||||||||||||| || ||||||||||||||
seq2  TAGCTCTTCCATTGGGGGGCCCTGTGATCCATTCAATAGCTGACTGTGAG  350

seq1  CATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGC  395
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CATCCACTTCTGTGTTTGCTAGGCTCCGGCATAGTCTCACAAGAGACAGC  400

seq1  TACATCTGGGTCCTTTCAGTAAAATCTTGCTAGTGTATGCAATGGTGTCA  445
      || |||||||| |||| || |||||||||||||| |||||||||||||||
seq2  TATATCTGGGTTCTTTTAGCAAAATCTTGCTAGTATATGCAATGGTGTCA  450

seq1  GCATTTGGAAGCTGATTATGGGGTG  470
      || ||||||||||||||||||| ||
seq2  GCGTTTGGAAGCTGATTATGGGATG  475


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