BAC Information

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BAC

Clone NameB6Ng01-207E07
Chromosome12 (Build37)
Map Location 37,633,564 - 37,830,434
singlet/doubletdoublet
Overlap genenone
Upstream geneAgr3, Agr2, Tspan13, EG432649, Bzw2, Ankmy2, 1700108M19Rik, Sostdc1, 4930579E17Rik, LOC638858
Downstream geneMeox2, A530016O06Rik, LOC100043139, Dgkb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207E07.bB6Ng01-207E07.g
ACCGA026470GA026471
length316783
definitionB6Ng01-207E07.b B6Ng01-207E07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,633,564 - 37,633,880)(37,829,652 - 37,830,434)
sequence
acagtggaagatggagcattggggaggggaggagggaagagaaagagttt
aattatatttttaccccaaacattttaaaaccaaaactaatttggatcaa
aaacatattgaaggaaactttgggaaaatttcatatattgacttgattat
tgtgtatttcttcatataagtggaaacctcagaaaagcaatgactcttat
gtttaatactaataacgcaggcaatttgaaccatgccttataaggctcag
taaatgcttaatgggtactaaattggattgtatgatctttttctgagaaa
ataattattattttct

gaattccaggtaaaacagtcttctctctgagatttccagctttaagagtc
tggcatgactaatgcaatgttggcatcactataggttattcttctgtgtt
tttgtttttgtacttcatcaatttgtagactattcttaagttactctccc
acttagagcttggtttatgaatcaaatcactaaaatctgtgctttaacca
tattaatatagttctactcagatatttaatcctcactctaaatttatact
gagaggctcaatacctcacataaactggttttcatagatgccattatttt
tatttataggcataaaacaaaaggttgtacattcatgttctaaatgaaat
gggaagtaagggccaagtacacaatttcttttataacaatttctaaaact
ttaatattaattctttgtatggtcttaaagttttaaaattactttaatag
aagatataaaatattttgtttgagtcaatttccaaatcaaaattatctca
aacaagaacaaaaatgataaaataactactgctcacgtgtgggtgtgttc
agtagagaacaacaacagaggagaagtgtacagagcatctcacaagctaa
caagtgaaatgaacttaatatatggagaatagttttatatttacataaat
atgaagttgtgttatgtgtgatagttatgaaatccctaagtatatgtctt
ctttaaaataagattaaaattaattagaaagttttatatttcatcatcat
caatcatcatcattcatatatatatatgttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_37633564_37633880
seq2: B6Ng01-207E07.b_41_356

seq1  ACAGTGGAAGATGGAGCATTGGGGAGGGGAGGAGGGAAGAGAAAGAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGAAGATGGAGCATTGGGGAGGGGAGGAGGGAAGAGAAAGAGTTT  50

seq1  AATTATATTTTAACAACCAAACATTTCAAAACCAAAACTAATTTGGATCA  100
      ||||||||||| ||  |||||||||| |||||||||||||||||||||||
seq2  AATTATATTTTTAC-CCCAAACATTTTAAAACCAAAACTAATTTGGATCA  99

seq1  AAAACATATTGAAGGAAACTTTGGGAAAATTTCATATATTGACTTGATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATATTGAAGGAAACTTTGGGAAAATTTCATATATTGACTTGATTA  149

seq1  TTGTGTATTTCTTCATATAAGTGGAAACCTCAGAAAAGCAATGACTCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTATTTCTTCATATAAGTGGAAACCTCAGAAAAGCAATGACTCTTA  199

seq1  TGTTTAATACTAATAACGCAGGCAATTTGAACCATGCCTAATAAGGCTCA  250
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGTTTAATACTAATAACGCAGGCAATTTGAACCATGCCTTATAAGGCTCA  249

seq1  GTAAATGCTGAATGGGTACAAAAGTGGATTGAATGAGCTCCTTCTGAGAA  300
      ||||||||| ||||||||| ||| ||||||| |||| ||  |||||||||
seq2  GTAAATGCTTAATGGGTACTAAATTGGATTGTATGATCTTTTTCTGAGAA  299

seq1  AATAAGTATAATTTTCT  317
      ||||| ||| |||||||
seq2  AATAATTATTATTTTCT  316


seq1: chr12_37829652_37830434
seq2: B6Ng01-207E07.g_67_849 (reverse)

seq1  CACACACATATATATATATG-ATGATGATGATTGATGATGATGAAATATA  49
      |||| ||||||||||||||| |||||||||||||||||||||||||||||
seq2  CACA-ACATATATATATATGAATGATGATGATTGATGATGATGAAATATA  49

seq1  AAACTTTCTAATTAATTTTAATCTTATTTTAAAGAAGACATATACTTAGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTCTAATTAATTTTAATCTTATTTTAAAGAAGACATATACTTAGG  99

seq1  GATTTCATAACTATCACACATAACACAACTTCATATTTATGTAAATATAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCATAACTATCACACATAACACAACTTCATATTTATGTAAATATAA  149

seq1  AACTATTCTCCATATATTAAGTTCATTTCACTTGTTAGCTTGTGAGATGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTCTCCATATATTAAGTTCATTTCACTTGTTAGCTTGTGAGATGC  199

seq1  TCTGTACACTTCTCCTCTGTTGTTGTTCTCTACTGAACACACCCACACGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACACTTCTCCTCTGTTGTTGTTCTCTACTGAACACACCCACACGT  249

seq1  GAGCAGTAGTTATTTTATCATTTTTGTTCTTGTTTGAGATAATTTTGATT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTAGTTATTTTATCATTTTTGTTCTTGTTTGAGATAATTTTGATT  299

seq1  TGGAAATTGACTCAAACAAAATATTTTATATCTTCTATTAAAGTAATTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATTGACTCAAACAAAATATTTTATATCTTCTATTAAAGTAATTTT  349

seq1  AAAACTTTAAGACCATACAAAGAATTAATATTAAAGTTTTAGAAATTGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTTAAGACCATACAAAGAATTAATATTAAAGTTTTAGAAATTGTT  399

seq1  ATAAAAGAAATTGTGTACTTGGCCCTTACTTCCCATTTCATTTAGAACAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGAAATTGTGTACTTGGCCCTTACTTCCCATTTCATTTAGAACAT  449

seq1  GAATGTACAACCTTTTGTTTTATGCCTATAAATAAAAATAATGGCATCTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTACAACCTTTTGTTTTATGCCTATAAATAAAAATAATGGCATCTA  499

seq1  TGAAAACCAGTTTATGTGAGGTATTGAGCCTCTCAGTATAAATTTAGAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACCAGTTTATGTGAGGTATTGAGCCTCTCAGTATAAATTTAGAGT  549

seq1  GAGGATTAAATATCTGAGTAGAACTATATTAATATGGTTAAAGCACAGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTAAATATCTGAGTAGAACTATATTAATATGGTTAAAGCACAGAT  599

seq1  TTTAGTGATTTGATTCATAAACCAAGCTCTAAGTGGGAGAGTAACTTAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGATTTGATTCATAAACCAAGCTCTAAGTGGGAGAGTAACTTAAG  649

seq1  AATAGTCTACAAATTGATGAAGTACAAAAACAAAAACACAGAAGAATAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTCTACAAATTGATGAAGTACAAAAACAAAAACACAGAAGAATAAC  699

seq1  CTATAGTGATGCCAACATTGCATTAGTCATGCCAGACTCTTAAAGCTGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTGATGCCAACATTGCATTAGTCATGCCAGACTCTTAAAGCTGGA  749

seq1  AATCTCAGAGAGAAGACTGTTTTACCTGGAATTC  783
      ||||||||||||||||||||||||||||||||||
seq2  AATCTCAGAGAGAAGACTGTTTTACCTGGAATTC  783


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