BAC Information

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BAC

Clone NameB6Ng01-207M18
Chromosome12 (Build37)
Map Location 90,420,819 - 90,421,956
singlet/doubletsinglet
Overlap geneNrxn3
Upstream geneEG638008, EG666862, EG435337, LOC100039154, LOC633093, LOC667440, LOC100039383, EG266459, LOC667475, LOC620915, LOC435314, Adck1, LOC100039261, EG666915
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207M18.bB6Ng01-207M18.g
ACCGA026849GA026850
length1,2081,133
definitionB6Ng01-207M18.b B6Ng01-207M18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtatctcatttttcagtggggctacttgaat
ttctggagttcagcttcttgagctctttgtatataataaaagcaatatac
agcaaaccagtagccaacatcaaagtaaatggagagaagctggaagcaat
ccactaaaatcagggactagacaagactgcccactttctccatacctgtt
caatatagtacttgaagtcctagccagagcaattcgacaacaaaaggaga
tcaaggggataaaaattgaaaagtaagaagtcaaaatatcattatttgca
gatgatatgatagtatatataagtgaccccaaaaattccacaggagaact
cctaaacctgataaacagcttcagtgcagtagctggatataaaattaact
caaacaaatcagtggcctttctctacacaaaggataaacaggatgagaaa
gaaattagggaaacaacacccttcacaattgtcacaatataaaatacctt
ggtgtgactctaactaaggaagtgaaatatctgtatgacaagaacttcaa
atctctgaagaaagaaattgaagaagatctcagaagatgaaaagatctcc
catgctcatggattggcaggattaatatagtaaaaatggctatcctcccg
aaagcaatctacagaatcaatgcaatccccattaaaattccaactcttca
ctgagttagaaagggcaatttgcaaattcatctggaataacaaaaaacct
aggatatcaaaaactattctcaacaataaaagaacctctgggagaatcac
catgcctgacctcaagctgtactacagagcagttgtgattaaaaactgca
tagtactggtacagcaacagacatgtagatcaatggaatagaattgaaga
cccagaaatgaacccacaaacctatggtcacttgatctttgacaagggag
ctaaaaccatctagtggaaaaaaaagacggcattttcaacaaatggtgct
ggcaacaactgggcagttatcatgtaagaataatttggaattgatccatt
cttatctcttgtacaaagctcaactctaaagttgatcaaggactccaaca
ttaaaacagaggacactgaaccttaatagagaagaaagtgggtcaaagcc
tcgaagaatatgggcaagggaaaattactaaaccgaaaccaggccaaaag
tggtccgt
gaattctatggaccaatgggttgagccactgtaggcaacccctgggaaag
gagctcaaatgtgttttgtaaaattgagcaatcttttaacagtaacagtt
gagctcctttcatttctataggtaaaatatgcaatgggtaagatgtgcat
atgtcttgtaacctgagcattgcggaggcagaagtagaaggatcagaaat
tccttctatctttggctacatggtgagttggaggttatcgtgagcctatg
tgtcaaaagtaaaccaaaccttaaacaaataattgttctgtaattcccaa
tgattgactatctatctatctatctatctatctatctatctatctatcta
tctatctatctatctatctagtgtatcttgatctacagatatagttgagg
ttgtaatacatgaaaccacaaagccacacttcttgtaagaaagcattgca
ctgagtatttttaattaccttggaatttgtctgagagttattattctatg
catcactagttggatgctctctattctggaattgtggagaagagaacaga
ataaatgcctgttaatgctatgtatatttcaggacttcgattagcaagct
atttgaaagatcggtgtctccccgtatgttacataaactgatttaaaacc
tccagcaatacatatctagatcccatctagtgtttaatcaattggacact
tacaaataatggctaaatgatttgctgtcgtaaggagctgagctctgctt
ttcacacagtgacactaacatttttattttaatacttacaccatggatag
taaactttggcatgatattacttagatggatctcaacagcccattagctg
tgttagtagtgccttctctcttgccaagccatagctgtatgctaaactgc
tgcgtgctatattacataatcccctgcattcccttttctccacctgttag
cctgaatgcatacaaagtgactgccttgtctttcaaccccattctcactc
aactgtaagcatcatttatagaaaacgaatttttggacacgatgcctttt
ttttttttcactggagaatgatcactcaagaaatatattttgtccataat
cctgtctgctttggattatgttgaactgtcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_90420819_90421956
seq2: B6Ng01-207M18.g_69_1201

seq1  GAATTCTATGGACCAATGGGTTGAGCCACTGTAGGCAACCCCTGGGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGGACCAATGGGTTGAGCCACTGTAGGCAACCCCTGGGAAAG  50

seq1  GAGCTCAAATGTGTTTTGTAAAATTGAGCAATCTTTTAACAGTAACAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCAAATGTGTTTTGTAAAATTGAGCAATCTTTTAACAGTAACAGTT  100

seq1  GAGCTCCTTTCATTTCTATAGGTAAAATATGCAATGGGTAAGATGTGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCTTTCATTTCTATAGGTAAAATATGCAATGGGTAAGATGTGCAT  150

seq1  ATGTCTTGTAACCTGAGCATTGCGGAGGCAGAAGTAGAAGGATCAGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTGTAACCTGAGCATTGCGGAGGCAGAAGTAGAAGGATCAGAAAT  200

seq1  TCCTTCTATCTTTGGCTACATGGTGAGTTGGAGGTTATCGTGAGCCTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTATCTTTGGCTACATGGTGAGTTGGAGGTTATCGTGAGCCTATG  250

seq1  TGTCAAAAGTAAACCAAACCTTAAACAAATAATTGTTCTGTAATTCCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAAGTAAACCAAACCTTAAACAAATAATTGTTCTGTAATTCCCAA  300

seq1  TGATTGACTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGACTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA  350

seq1  TCTATCTATCTATCTATCTAGTGTATCTTGATCTACAGATATAGTTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTATCTATCTATCTAGTGTATCTTGATCTACAGATATAGTTGAGG  400

seq1  TTGTAATACATGAAACCACAAAGCCACACTTCTTGTAAGAAAGCATTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATACATGAAACCACAAAGCCACACTTCTTGTAAGAAAGCATTGCA  450

seq1  CTGAGTATTTTTAATTACCTTGGAATTTGTCTGAGAGTTATTATTCTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTATTTTTAATTACCTTGGAATTTGTCTGAGAGTTATTATTCTATG  500

seq1  CATCACTAGTTGGATGCTCTCTATTCTGGAATTGTGGAGAAGAGAACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTAGTTGGATGCTCTCTATTCTGGAATTGTGGAGAAGAGAACAGA  550

seq1  ATAAATGCCTGTTAATGCTATGTATATTTCAGGACTTCGATTAGCAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGCCTGTTAATGCTATGTATATTTCAGGACTTCGATTAGCAAGCT  600

seq1  ATTTGAAAGATCGGTGTCTCCCCGTATGTTACATAAACTGATTTAAAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAAGATCGGTGTCTCCCCGTATGTTACATAAACTGATTTAAAACC  650

seq1  TCCAGCAATACATATCTAGATCCCATCTAGTGTTTAATCAATTGGACACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCAATACATATCTAGATCCCATCTAGTGTTTAATCAATTGGACACT  700

seq1  TACAAATAATGGCTAAATGATTTGCTGTCGTAAGGAGCTGAGCTCTGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATAATGGCTAAATGATTTGCTGTCGTAAGGAGCTGAGCTCTGCTT  750

seq1  TTCACACAGTGACACTAACATTTTTATTTTAATACTTACACCATGGATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACAGTGACACTAACATTTTTATTTTAATACTTACACCATGGATAG  800

seq1  TAAACTTTGGCATGATATTACTTAGATGGATCTCAACAGCCCATTAGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTTGGCATGATATTACTTAGATGGATCTCAACAGCCCATTAGCTG  850

seq1  TGTTAGTAGTGCCTTCTCTCTTGCCAAGCCATAGCTGTATGCTAAACTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTAGTGCCTTCTCTCTTGCCAAGCCATAGCTGTATGCTAAACTGC  900

seq1  TGCGTGCTATATTACATAATCCCCTGCATT-CCTTTTCTCCACCTGTTTA  949
      |||||||||||||||||||||||||||||| ||||||||||||||| |||
seq2  TGCGTGCTATATTACATAATCCCCTGCATTCCCTTTTCTCCACCTG-TTA  949

seq1  GCCTGAATGCATACAAAGTGACTGCCTTGTCTTTTCAACCCCATTCTCAC  999
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GCCTGAATGCATACAAAGTGACTGCCTTGTC-TTTCAACCCCATTCTCAC  998

seq1  TC-ACTGTAAGCATCATTTATAGAAAACGAATTTTTGGACACGATTGCCC  1048
      || ||||||||||||||||||||||||||||||||||||||||| |||| 
seq2  TCAACTGTAAGCATCATTTATAGAAAACGAATTTTTGGACACGA-TGCCT  1047

seq1  TTTTTTTTTTTCCAACTGGAGAATTGAATCAACTC-AGAAATATATTTTG  1097
      ||||||||||||  ||||||||||   ||| |||| ||||||||||||||
seq2  TTTTTTTTTTTC--ACTGGAGAAT--GATC-ACTCAAGAAATATATTTTG  1092

seq1  TCCAT-ATCTGGTTCTGCCTTTTGATTATGTTG-ACTGTCAGC  1138
      ||||| |||  | |||| |||| |||||||||| |||||||||
seq2  TCCATAATCCTG-TCTG-CTTTGGATTATGTTGAACTGTCAGC  1133