BAC Information

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BAC

Clone NameB6Ng01-208D15
Chromosome12 (Build37)
Map Location 38,419,081 - 38,420,194
singlet/doubletsinglet
Overlap genenone
Upstream geneMeox2, A530016O06Rik
Downstream geneLOC100043139, Dgkb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208D15.bB6Ng01-208D15.g
ACCGA027162GA027163
length1,1871,102
definitionB6Ng01-208D15.b B6Ng01-208D15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggatatttgatt
ttctggattcaagcttcttgagttctttgtatatgttggatattagcacc
ctatcagatttaggattggtaaacatctttcccaatctgttggtggcctt
ttggtcttattgacggtgtcctttgccttacagaagctttgcaattttaa
tgagttcccatttgtccattctcattcttacagaagaaaccattgctgtt
ctgtttaggactttttcctgtgcccatatcttcgaggcttttccccactt
tatcctctataggtttcagtgtctctggttttacgtggcattccttgacc
catttagacttgagctttgtacaaggatataagaatggatcaattcaatc
catttctatatgataaccgctagtttagcccacaccatttgttgaaaatg
ctgtcttttccccactggatggttttagcttccttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctatcccattggt
ctacttgtctgttgctataacagtacagtgcagtttgtatcacaattatt
ctgtagtacaactttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctaggttttctgttattccagatga
atttgcaaactgccctttctaactcggtgaagaattgagttgaaattttg
aatttgaatctgtagattgctttcggccagatagccattttgactatatt
aatcctgccaatccatgagcatgggagacctttccatattctgagatctt
cttcgattgctttcttcagagacttgaagttcttatcatactgctactgc
actcaagctctttatcacgtttaggagttgtctgggtcaagtttttaggg
ttgattatatatagtatcatatcatctgcaaatagtgatattttgacttc
tactttccagtttgtatcctgtgatctctttgtgtctattgctctggcta
gactcagtacttatattgaatagtagggagaaagtgggctgccctatcta
gtcctgattcagtggattgcttcaattaactcagtcgttgaagttgcaac
tctgtaaatatggcctttatatagtttaaggtaatcg
gaattcttcatgtgaaaatccaagcacaggtctgacctcccttgcagaag
gattagttgttaaatgattgccaagctcttggaatatatgaagctctccg
aaaaaaaaaaaaaggttggttgctaattctcctcattctgagaaggggaa
gctgatgacagcgctaggctgaagtgtctcatctcagacaaatactcagc
ccatattcactgtggaatttccaatttgcaagtggccagagggcacattg
aaaccttcatggagaaacagcccataccgcacctggcataggattagagg
ctccgtaaggaaaatgttatttcctgtgttcagttctcaatttggttcct
ttttttttttttcacattctctcatctgactagttaagtgggttttgcat
agaatcatcctgtcataggtaagaagatcaaatgctgaaagacaatatta
cctgagaaaaacccattagaatgagattatggaaataaataggcatcttt
agtggtttagtaaggtctgcagatgacatcatttccacaatttttattgc
atttaaacctctaggaaagatacttaaagctcccaaaggtatcttcagtg
aaagtacaggatgcaatggaaaagaaaacagttttcatggaattgtgaat
tgtacaggagtacaatttagagatacatattcataagtcattaacaaatt
ccagatcagttcatgattattcatcattagaggcacacttactcgacttt
acatgtattattcattcgctttgtttatgaacatctttaactgattaatg
gcaaatcttgatgaatattcctgaattgttcagaccaaagcacagatcat
actgagtgaagtcatgcattgcccctcaggagtgtaggatgaatagttga
tacaggaagaagaagaaagttcaatgtcattttgcaaatatgtctgggtt
tagaatctaagggcttaactttttttatagtatcatattgcaatcagcat
ccactcttatagctctgctatagagtcagaaaaggtgatgtaggcatagc
agagcatgcctcagccacctctgtggattttcgcccacattctgaaccag
ct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_38419081_38420194
seq2: B6Ng01-208D15.g_66_1167 (reverse)

seq1  AGCTGGTTTCAGAAATGTGGGCCGGAAAAATTCCACAGAGGTGCTTGAGG  50
      |||||| ||||| |||||||||  |||||  ||||||||||||  |||||
seq2  AGCTGG-TTCAG-AATGTGGGC--GAAAA--TCCACAGAGGTGGCTGAGG  44

seq1  CATGCTTCCTGGCTATGCCTTACATCACCTTTTCTGACTCTATAGCCAAG  100
      ||||||  || |||||||| ||||||||||||||||||||||||||  ||
seq2  CATGCT--CT-GCTATGCC-TACATCACCTTTTCTGACTCTATAGC--AG  88

seq1  AGCTATAAGAGTTGGATGCTGATTGCCAATATGATACTA-ATAAAAAGTT  149
      ||||||||||| ||||||||||||| ||||||||||||| | ||||||||
seq2  AGCTATAAGAG-TGGATGCTGATTG-CAATATGATACTATAAAAAAAGTT  136

seq1  AAGCCCTTAGATTTCTAAA-CCAGACATATTTGCAAAATGACATTGAACT  198
      ||||||||||| ||||||| ||||||||||||||||||||||||||||||
seq2  AAGCCCTTAGA-TTCTAAACCCAGACATATTTGCAAAATGACATTGAACT  185

seq1  TTCTTC-TCTTCCTGTATCAACTATTCATCCTACACTCCTGAGGGGCAAT  247
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCCTGTATCAACTATTCATCCTACACTCCTGAGGGGCAAT  235

seq1  GCATGACTTCACTCAGTATGATCTGTGCTTTGGTCTGAACAATTCAGGAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGACTTCACTCAGTATGATCTGTGCTTTGGTCTGAACAATTCAGGAA  285

seq1  TATTCATCAAGATTTGCCATTAATCAGTTAAAGATGTTCATAAACAAAGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATCAAGATTTGCCATTAATCAGTTAAAGATGTTCATAAACAAAGC  335

seq1  GAATGAATAATACATGTAAAGTCGAGTAAGTGTGCCTCTAATGATGAATA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATAATACATGTAAAGTCGAGTAAGTGTGCCTCTAATGATGAATA  385

seq1  ATCATGAACTGATCTGGAATTTGTTAATGACTTATGAATATGTATCTCTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAACTGATCTGGAATTTGTTAATGACTTATGAATATGTATCTCTA  435

seq1  AATTGTACTCCTGTACAATTCACAATTCCATGAAAACTGTTTTCTTTTCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTACTCCTGTACAATTCACAATTCCATGAAAACTGTTTTCTTTTCC  485

seq1  ATTGCATCCTGTACTTTCACTGAAGATACCTTTGGGAGCTTTAAGTATCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATCCTGTACTTTCACTGAAGATACCTTTGGGAGCTTTAAGTATCT  535

seq1  TTCCTAGAGGTTTAAATGCAATAAAAATTGTGGAAATGATGTCATCTGCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGAGGTTTAAATGCAATAAAAATTGTGGAAATGATGTCATCTGCA  585

seq1  GACCTTACTAAACCACTAAAGATGCCTATTTATTTCCATAATCTCATTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTACTAAACCACTAAAGATGCCTATTTATTTCCATAATCTCATTCT  635

seq1  AATGGGTTTTTCTCAGGTAATATTGTCTTTCAGCATTTGATCTTCTTACC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTTTTTCTCAGGTAATATTGTCTTTCAGCATTTGATCTTCTTACC  685

seq1  TATGACAGGATGATTCTATGCAAAACCCACTTAACTAGTCAGATGAGAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACAGGATGATTCTATGCAAAACCCACTTAACTAGTCAGATGAGAGA  735

seq1  ATGTGAAAAAAAAAAAAAGGAACCAAATTGAGAACTGAACACAGGAAATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAAAAAAAAAAAAGGAACCAAATTGAGAACTGAACACAGGAAATA  785

seq1  ACATTTTCCTTACGGAGCCTCTAATCCTATGCCAGGTGCGGTATGGGCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCCTTACGGAGCCTCTAATCCTATGCCAGGTGCGGTATGGGCTG  835

seq1  TTTCTCCATGAAGGTTTCAATGTGCCCTCTGGCCACTTGCAAATTGGAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCATGAAGGTTTCAATGTGCCCTCTGGCCACTTGCAAATTGGAAA  885

seq1  TTCCACAGTGAATATGGGCTGAGTATTTGTCTGAGATGAGACACTTCAGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAGTGAATATGGGCTGAGTATTTGTCTGAGATGAGACACTTCAGC  935

seq1  CTAGCGCTGTCATCAGCTTCCCCTTCTCAGAATGAGGAGAATTAGCAACC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCGCTGTCATCAGCTTCCCCTTCTCAGAATGAGGAGAATTAGCAACC  985

seq1  AACCTTTTTTTTTTTTTCGGAGAGCTTCATATATTCCAAGAGCTTGGCAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTTTTTTTTTTTCGGAGAGCTTCATATATTCCAAGAGCTTGGCAA  1035

seq1  TCATTTAACAACTAATCCTTCTGCAAGGGAGGTCAGACCTGTGCTTGGAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAACAACTAATCCTTCTGCAAGGGAGGTCAGACCTGTGCTTGGAT  1085

seq1  TTTCACATGAAGAATTC  1114
      |||||||||||||||||
seq2  TTTCACATGAAGAATTC  1102