BAC Information

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BAC

Clone NameB6Ng01-208O13
Chromosome12 (Build37)
Map Location 105,534,138 - 105,534,869
singlet/doubletsinglet
Overlap genenone
Upstream geneEG544888, Asb2, Otub2, Ddx24, D12Ertd647e, Ifi27, 1810023F06Rik, 8430415E04Rik, Serpina10, Serpina6, Gm46, Serpina1f, EG435316, Serpina1b, Serpina1d, LOC667951, LOC628801, Serpina1a, LOC667954, Serpina1c, Serpina1e, Serpina11, Serpina9, Serpina12, Serpina4-ps1, Serpina5, Serpina3a, Serpina3b, Serpina3c, LOC435318, LOC628883, Serpina3f, LOC667997, Serpina3g, Serpina3h, EG628900
Downstream geneEG238395, Serpina3k, EG628916, Serpina3m, Serpina3n, Gsc, Dicer1, Clmn, 4831426I19Rik, Snhg10, Glrx5, LOC100040301, Tcl1b2, Tcl1b1, Tcl1b5, Tcl1b3, Tcl1b4, Tcl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208O13.bB6Ng01-208O13.g
ACCGA027662GA027663
length1,065732
definitionB6Ng01-208O13.b B6Ng01-208O13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtattctcttttttggtaattgattgatttaagcctttagt
ttgattatttcctgccatctactcctctttggtgtgtttgcttctttttg
ttcttttagctttcaagtatactttaaaattgttagttagtatgtgatct
gttccgtttctttatgaatggatttactggtatgaactttcctcttagca
ctgcttccattgtgtctcataagtttcggtaagtagtgcactcattttca
atgaattctagaaagtgtttcatttctctctttatttcttccttgacttg
gtggttattgagttgaaagtagttcagtttgcatgaatttgtaaactgtg
ttgtttctgttgttgaaatccagctttaaatcatgatgctctgatatgac
acaaggggttctttctattttcttgtacttgtgaaggtttgctttgtggc
agactatatggtcaactttggataaggtcctgagaagaaggtatattctt
ttgtgtttggttgaaatgttctttagatatattaggtccatttgattcat
aacatgtattagtctcatgatttgtctttttagtttctgtctcaataaca
tgtcaattagtgagagtggggtgttgaagtctcccactattaatgaatgg
ggtttgagatgagagttaaacttcagtaatgattcttttacaaatgtgga
tgtccttgcatttagggcacagatgctcagaattgagacttggtggattt
ttcctttgatgagtatgatttgtttcgattaattttggttgagagtatat
tttattagatatttgactggcttctccagcttgctttctgggactgtttt
cttggaaacatttttccagccccttactctgaggtaatgtctttctttgt
tgacgggggtgtgtttcttgtatgcagcaaatgatggatcctttgttggc
ttccttttgtagcctgtatcttttattgggacattgaaatccattgatgc
tgataggtattatgaccaatgattgttattcctgttgttttcatgttggg
atggtctgtaggcat
gaattcattcacacattcatgcattcatgcattcactgctgctctgcatc
cagatttgacttgtatgcagaggatagacaatgggccacagctgctggcc
ttgagtcttgggtctcagaggtggtgacaaacacatggagattgtaatgg
tgtggttcctcatgtattgtcaggctgatgaatgacgatctgaagtctag
attcatatccagtctttagttctcttgtttcactgtgacttgttgttaag
ggtactggttgtggacaatgcatacttcatggtccccaaatctctaatgt
gagctgaacctgccctgtgtactgaagactagtgaaaagcttcccagatc
cccactgatcccctccttaaatggaacatcagcactcagggcaggaggaa
tgttagcctgcatcttcctggcagcatcttgacagacagctgccctgtat
ctgttctagcattggaggtggcagaaggatgatcagagctatgagaggtt
attggaaatgtatttaacttgagagaagagaccagaggaatgcaggagct
ccagcaggctgccctgaggagaatcctctctgctgagaagtacaaaggaa
ggaaagtgggaggggcttcagagacagtgggtacatgctcctggtttgta
gcagggggtgaaactgcatcactcttgcctcctttcactctctttggtgt
gctgctggagaacatgggtagttttggaacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_105534138_105534869
seq2: B6Ng01-208O13.g_70_801 (reverse)

seq1  CTGTTCCAAAACTACCCATGTTCTCCAGCAGCACACCAAAGAGAGTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCAAAACTACCCATGTTCTCCAGCAGCACACCAAAGAGAGTGAAA  50

seq1  GGAGGCAAGAGTGATGCAGTTTCACCCCCTGCTACAAACCAGGAGCATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAAGAGTGATGCAGTTTCACCCCCTGCTACAAACCAGGAGCATGT  100

seq1  ACCCACTGTCTCTGAAGCCCCTCCCACTTTCCTTCCTTTGTACTTCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTGTCTCTGAAGCCCCTCCCACTTTCCTTCCTTTGTACTTCTCAG  150

seq1  CAGAGAGGATTCTCCTCAGGGCAGCCTGCTGGAGCTCCTGCATTCCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGGATTCTCCTCAGGGCAGCCTGCTGGAGCTCCTGCATTCCTCTG  200

seq1  GTCTCTTCTCTCAAGTTAAATACATTTCCAATAACCTCTCATAGCTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTCTCTCAAGTTAAATACATTTCCAATAACCTCTCATAGCTCTGA  250

seq1  TCATCCTTCTGCCACCTCCAATGCTAGAACAGATACAGGGCAGCTGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTTCTGCCACCTCCAATGCTAGAACAGATACAGGGCAGCTGTCTG  300

seq1  TCAAGATGCTGCCAGGAAGATGCAGGCTAACATTCCTCCTGCCCTGAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATGCTGCCAGGAAGATGCAGGCTAACATTCCTCCTGCCCTGAGTG  350

seq1  CTGATGTTCCATTTAAGGAGGGGATCAGTGGGGATCTGGGAAGCTTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTTCCATTTAAGGAGGGGATCAGTGGGGATCTGGGAAGCTTTTCA  400

seq1  CTAGTCTTCAGTACACAGGGCAGGTTCAGCTCACATTAGAGATTTGGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCTTCAGTACACAGGGCAGGTTCAGCTCACATTAGAGATTTGGGGA  450

seq1  CCATGAAGTATGCATTGTCCACAACCAGTACCCTTAACAACAAGTCACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAAGTATGCATTGTCCACAACCAGTACCCTTAACAACAAGTCACAG  500

seq1  TGAAACAAGAGAACTAAAGACTGGATATGAATCTAGACTTCAGATCGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAAGAGAACTAAAGACTGGATATGAATCTAGACTTCAGATCGTCA  550

seq1  TTCATCAGCCTGACAATACATGAGGAACCACACCATTACAATCTCCATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAGCCTGACAATACATGAGGAACCACACCATTACAATCTCCATGT  600

seq1  GTTTGTCACCACCTCTGAGACCCAAGACTCAAGGCCAGCAGCTGTGGCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCACCACCTCTGAGACCCAAGACTCAAGGCCAGCAGCTGTGGCCC  650

seq1  ATTGTCTATCCTCTGCATACAAGTCAAATCTGGATGCAGAGCAGCAGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTATCCTCTGCATACAAGTCAAATCTGGATGCAGAGCAGCAGTGA  700

seq1  ATGCATGAATGCATGAATGTGTGAATGAATTC  732
      ||||||||||||||||||||||||||||||||
seq2  ATGCATGAATGCATGAATGTGTGAATGAATTC  732