BAC Information

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BAC

Clone NameB6Ng01-208O23
Chromosome12 (Build37)
Map Location 45,502,026 - 45,624,044
singlet/doubletdoublet
Overlap geneNrcam
Upstream geneLOC100039059, ENSMUSG00000066507, LOC100039081, LOC664854, Dnajb9, LOC100039062, Pnpla8
Downstream geneEG620025, Stxbp6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208O23.bB6Ng01-208O23.g
ACCGA027682GA027683
length7981,146
definitionB6Ng01-208O23.b B6Ng01-208O23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,502,026 - 45,502,820)(45,622,876 - 45,624,044)
sequence
gaattctcaaattctagtgtattatgtgtccagtgatctctctgtatctc
tgtccctctctctctccactctccattctctctgtctgagagagagagag
agagagagagagagagagagagagagagagagagaggagagagagcgctg
tccagaggtttttatctcatgaacccagagctcttagattcactatgctg
actgtctgaggaatgatcccagaggcccaccctgggatctccctgtgttc
tcctccttgctaggattagcaggctttttacatgagagctgggaaggctc
tgttgattcttattcatgctttcttgctttttaaatataatttcatttta
attatgaagtaatattcctaggactttatctgtgaagaatgttaagtgac
tatgactcctgtttgattagatattgttggagagacatttcattcttctt
tcaacatcaaagtcaggaggaagatttttgctttcccttaataggatgaa
ctttgatttcatcaaggatgtagcctttgggcatctagtttgggactgtc
atttctatgcagaccaatgcatacttcatcacacacttccaccttcccag
agactaatacccaaccccagaactccattagcaataaaacaaaaactaaa
agaaaaagaaaaagaaaaaaaaacttttaagttttggcttttgtttttga
actgcatttttcctttcactcccaaccctctggcatctccttttttaacg
cttaaagctctgctgcccttcatcagcatgtgtctatgcttgcattca
gaattcttttcctcctataatctggcttttctttaaacatgggtctagag
atagaagcaaaaccccagatttattaaaacccaatagacatcatttttac
cactccacagccttttgtaatactcacagcaacatttcaaaataaatcgt
actaaggtatccaagccatgtataatcgcaacagaaccatgaaagtgaag
gatagaagctgacaagacatgaagaattacattttccacttcttatcagt
gttgagaaagttgtattaacataaactccagagctggaaattgctcgttg
gagccagaagctgtttcatactaagcacaaatctcatcagtttttagttg
atacacagtgaatatcacacaggattcaccagtaggacagggaagccata
catgacaggttcaactcctgatacattgcattttcttcaaacagaccacg
tgaaaatcagaaaatattttaaaaagagaaaaagcaaaccaatgagcatt
catttgcttgaaagggaaatgtatcaaatctatcccaaagagaacgtcta
ccctgaacgttttaatgcagttcaatttccaggacgttccatactagaag
gccatgttctctacaagaacataagcataagaaagtatgcctgttggaaa
cgacatttttctgtaatatgagagttaatcaacccaacattttgactaaa
ctttggaatattcttctgcctgtactgaaagcaagatgtgccaggaaccc
cttttcccgaaaccatttacacagactccatagaaattgtattccactgc
aaaggcatgagacagtgtccagggagcaggcaggaaaagcactggaaaga
acatgggccctttccctctctccagtgaaagaatcaggcgaaagagattt
ggggttagactgaagttgatggatggcattaagcctagaattactgtgtc
cttcgtgttcctagtttaaatttttatataataattttttgtggcaaatg
agcacttgtatctaaactaaatatactattctctgacgtgggagaaggag
aattatgagaagaacgacagatcggcaatcacattagatgaaatggaatt
gagttattatgacctttactttttcacttagaaattggctgtgtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_45502026_45502820
seq2: B6Ng01-208O23.b_47_844

seq1  GAATTCTCAAATTCTAGTGTATTATGTGTCCAGTGATCTCTCTGTATCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAATTCTAGTGTATTATGTGTCCAGTGATCTCTCTGTATCTC  50

seq1  TGTCCCTCTCTCTCTCCACTCTCCATTCTCTCTGTCTGAGAGAGAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTCTCTCTCTCCACTCTCCATTCTCTCTGTCTGAGAGAGAGAGAG  100

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGCGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGCGCTG  150

seq1  TCCAGAGGTTTTTATCTCATGAACCCAGAGCTCTTAGATTCACTATGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGGTTTTTATCTCATGAACCCAGAGCTCTTAGATTCACTATGCTG  200

seq1  ACTGTCTGAGGAATGATCCCAGAGGCCCACCCTGGGATCTCCCTGTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTGAGGAATGATCCCAGAGGCCCACCCTGGGATCTCCCTGTGTTC  250

seq1  TCCTCCTTGCTAGGATTAGCAGGCTTTTTACATGAGAGCTGGGAAGGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTTGCTAGGATTAGCAGGCTTTTTACATGAGAGCTGGGAAGGCTC  300

seq1  TGTTGATTCTTATTCATGCTTTCTTGCTTTTTAAATATAATTTCATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATTCTTATTCATGCTTTCTTGCTTTTTAAATATAATTTCATTTTA  350

seq1  ATTATGAAGTAATATTCCTAGGACTTTATCTGTGAAGAATGTTAAGTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGAAGTAATATTCCTAGGACTTTATCTGTGAAGAATGTTAAGTGAC  400

seq1  TATGACTCCTGTTTGATTAGATATTGTTGGAGAGACATTTCATTCTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTCCTGTTTGATTAGATATTGTTGGAGAGACATTTCATTCTTCTT  450

seq1  TCAACATCAAAGTCAGGAGGAAGATTTTTGCTTTCCCTTAATAGGATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATCAAAGTCAGGAGGAAGATTTTTGCTTTCCCTTAATAGGATGAA  500

seq1  CTTTGATTTCATCAAGGATGTAGCCTTTGGGCATCTAGTTTGGGACTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATTTCATCAAGGATGTAGCCTTTGGGCATCTAGTTTGGGACTGTC  550

seq1  ATTTCTATGCAGACCAATGCATACTTCATCACACACTTCCACCTTCCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTATGCAGACCAATGCATACTTCATCACACACTTCCACCTTCCCAG  600

seq1  AGACTAATACCCAACCCCAGAACTCCATTAGCAATAAAACAAAAACAAAA  650
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGACTAATACCCAACCCCAGAACTCCATTAGCAATAAAACAAAAACTAAA  650

seq1  AGAAAA--GAAAAGAAAAAAAAACTTTTAAGTTTTGGCTTTTG-TTTTGA  697
      ||||||   |||||||||||||||||||||||||||||||||| ||||||
seq2  AGAAAAAGAAAAAGAAAAAAAAACTTTTAAGTTTTGGCTTTTGTTTTTGA  700

seq1  ACTGTCATTTTCCTTTCACT-CCAACCCTCTGGCATCTCCTTTTTAACTG  746
      ||||   ||||||||||||| |||||||||||||||||||||||| |  |
seq2  ACTGCATTTTTCCTTTCACTCCCAACCCTCTGGCATCTCCTTTTTTAACG  750

seq1  CTTAGAGCTCTGCTGCCCTTCATCAGCATGTGTCTTATGCTTGCATTCA  795
      |||| ||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTTAAAGCTCTGCTGCCCTTCATCAGCATGTGTC-TATGCTTGCATTCA  798

seq1: chr12_45622876_45624044
seq2: B6Ng01-208O23.g_64_1209 (reverse)

seq1  GTACAACAGCACAATTTCTAAGTGAAAAGAGTAAAAGTCATAATATAACT  50
      |||| ||||| ||||||||||||||||| |||||| ||||||  ||||| 
seq2  GTAC-ACAGC-CAATTTCTAAGTGAAAA-AGTAAAGGTCATA--ATAAC-  44

seq1  TCATATCTATTTCATCTAAAATGTTGGGTTTTGCCCGATCTGTTCGTTTC  100
      |||  || |||||||||||  || | |       |||||||| ||| |||
seq2  TCAATTCCATTTCATCTAATGTGATTG-------CCGATCTG-TCG-TTC  85

seq1  TTCTCAT-ATTCTCCCTTCTTCCCACGTTCAGAGGAATAAGTATATTTAG  149
      ||||||| ||||| ||||| ||||||| ||||| |||| |||||||||||
seq2  TTCTCATAATTCT-CCTTC-TCCCACG-TCAGA-GAAT-AGTATATTTAG  130

seq1  TTTTAGATTACAAGTGCTCATTTTGCCCACAAAAATTATTATATAAAAAT  199
       |||||| |||||||||||| ||||||   ||||||||||||||||||||
seq2  -TTTAGA-TACAAGTGCTCA-TTTGCCACAAAAAATTATTATATAAAAAT  177

seq1  TTAAACTAGGAACACCGAAGGACACAGTAATTCTAGGCTTAATGCCATCC  249
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTAAACTAGGAACA-CGAAGGACACAGTAATTCTAGGCTTAATGCCATCC  226

seq1  ATCAACTTCAGTCTAACCCCAAATCTCTTTCGCCCTGATTCTTTCACTGG  299
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATCAACTTCAGTCTAACCCCAAATCTCTTTCG-CCTGATTCTTTCACTGG  275

seq1  AGAGAGGGAAAGGG-CCATGTTCTTTCCAGTGCTTTTCCTGCCTGCTCCC  348
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGAGAGGGAAAGGGCCCATGTTCTTTCCAGTGCTTTTCCTGCCTGCTCCC  325

seq1  TGGACACTGTCTCATGCCTTTGCAGTGGAATACAATTTCTATGGAGTCTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACTGTCTCATGCCTTTGCAGTGGAATACAATTTCTATGGAGTCTG  375

seq1  TGTAAATGGTTTCGGGAAAAGGGGTTCCTGGCACATCTTGCTTTCAGTAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATGGTTTCGGGAAAAGGGGTTCCTGGCACATCTTGCTTTCAGTAC  425

seq1  AGGCAGAAGAATATTCCAAAGTTTAGTCAAAATGTTGGGTTGATTAACTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAAGAATATTCCAAAGTTTAGTCAAAATGTTGGGTTGATTAACTC  475

seq1  TCATATTACAGAAAAATGTCGTTTCCAACAGGCATACTTTCTTATGCTTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTACAGAAAAATGTCGTTTCCAACAGGCATACTTTCTTATGCTTA  525

seq1  TGTTCTTGTAGAGAACATGGCCTTCTAGTATGGAACGTCCTGGAAATTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTGTAGAGAACATGGCCTTCTAGTATGGAACGTCCTGGAAATTGA  575

seq1  ACTGCATTAAAACGTTCAGGGTAGACGTTCTCTTTGGGATAGATTTGATA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATTAAAACGTTCAGGGTAGACGTTCTCTTTGGGATAGATTTGATA  625

seq1  CATTTCCCTTTCAAGCAAATGAATGCTCATTGGTTTGCTTTTTCTCTTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCCTTTCAAGCAAATGAATGCTCATTGGTTTGCTTTTTCTCTTTT  675

seq1  TAAAATATTTTCTGATTTTCACGTGGTCTGTTTGAAGAAAATGCAATGTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTTTCTGATTTTCACGTGGTCTGTTTGAAGAAAATGCAATGTA  725

seq1  TCAGGAGTTGAACCTGTCATGTATGGCTTCCCTGTCCTACTGGTGAATCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGTTGAACCTGTCATGTATGGCTTCCCTGTCCTACTGGTGAATCC  775

seq1  TGTGTGATATTCACTGTGTATCAACTAAAAACTGATGAGATTTGTGCTTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGATATTCACTGTGTATCAACTAAAAACTGATGAGATTTGTGCTTA  825

seq1  GTATGAAACAGCTTCTGGCTCCAACGAGCAATTTCCAGCTCTGGAGTTTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAAACAGCTTCTGGCTCCAACGAGCAATTTCCAGCTCTGGAGTTTA  875

seq1  TGTTAATACAACTTTCTCAACACTGATAAGAAGTGGAAAATGTAATTCTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATACAACTTTCTCAACACTGATAAGAAGTGGAAAATGTAATTCTT  925

seq1  CATGTCTTGTCAGCTTCTATCCTTCACTTTCATGGTTCTGTTGCGATTAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTTGTCAGCTTCTATCCTTCACTTTCATGGTTCTGTTGCGATTAT  975

seq1  ACATGGCTTGGATACCTTAGTACGATTTATTTTGAAATGTTGCTGTGAGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGCTTGGATACCTTAGTACGATTTATTTTGAAATGTTGCTGTGAGT  1025

seq1  ATTACAAAAGGCTGTGGAGTGGTAAAAATGATGTCTATTGGGTTTTAATA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAAAGGCTGTGGAGTGGTAAAAATGATGTCTATTGGGTTTTAATA  1075

seq1  AATCTGGGGTTTTGCTTCTATCTCTAGACCCATGTTTAAAGAAAAGCCAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGGGTTTTGCTTCTATCTCTAGACCCATGTTTAAAGAAAAGCCAG  1125

seq1  ATTATAGGAGGAAAAGAATTC  1169
      |||||||||||||||||||||
seq2  ATTATAGGAGGAAAAGAATTC  1146