BAC Information

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BAC

Clone NameB6Ng01-209C24
Chromosome12 (Build37)
Map Location 112,842,969 - 112,843,462
singlet/doubletsinglet
Overlap geneMark3
Upstream geneDync1h1, 1700001K19Rik, Hsp90aa1, Wdr20a, Rage, 2810455K09Rik, LOC100041649, 2810452K22Rik, 4930573I19Rik, Ankrd9, 6030440G07Rik, Rcor1, 4930595D18Rik, Traf3, Amn, Cdc42bpb, A230065H16Rik, 1200009I06Rik, Tnfaip2, Gm266, Eif5
Downstream geneCkb, 6720458F09Rik, Bag5, 2810002N01Rik, Klc1, Xrcc3, Zfyve21, Ppp1r13b, LOC100041886, 2010107E04Rik, BC048943, Tdrd9, A530050D06Rik, Kif26a, A730018C14Rik, A530016L24Rik, Tmem179, 2610204M08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209C24.g
ACCGA027872
length494
definitionB6Ng01-209C24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atctctaggtttatacgaacaactgtgagactgtgtctcttactaagttc
agacccgacactcaaaagtctcacaacatgccaaacgtcagctgaataag
gatgacaccagtagtcatgctcaactggtcagggaaaagaccaggaaacc
ccaagcctacatcaaactacagacaactgaggagagcaggcagcaggtca
agagctgtgaatcactaagcccgggcaaacacagactgtgaagattttag
ctctaagaaatgcaggcttcacttgtttcaactgggttcagtttgaatca
ctttaggaaagtgtatgtctcaagtgaaaatactttcatatgttgttttt
taaaattctctcttaagtcaaacattttttaaaattgccctcaaacccaa
ctatttttatgaaaaatttcacttaaagttttttgggggaggaggaagat
gcctaattagaaaactcagagtatccttaaaacggggggggggg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_112842969_112843462
seq2: B6Ng01-209C24.g_75_568 (reverse)

seq1  CCCCCCCCCCCGTTTTAAGGATACTCTGAGTTTTCTAATTAGGCATCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCGTTTTAAGGATACTCTGAGTTTTCTAATTAGGCATCTTC  50

seq1  CTCCTCCCCCAAAAAACTTTAAGTGAAATTTTTCATAAAAATAGTTGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCCCAAAAAACTTTAAGTGAAATTTTTCATAAAAATAGTTGGGT  100

seq1  TTGAGGGCAATTTTAAAAAATGTTTGACTTAAGAGAGAATTTTAAAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGCAATTTTAAAAAATGTTTGACTTAAGAGAGAATTTTAAAAAAC  150

seq1  AACATATGAAAGTATTTTCACTTGAGACATACACTTTCCTAAAGTGATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATGAAAGTATTTTCACTTGAGACATACACTTTCCTAAAGTGATTC  200

seq1  AAACTGAACCCAGTTGAAACAAGTGAAGCCTGCATTTCTTAGAGCTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAACCCAGTTGAAACAAGTGAAGCCTGCATTTCTTAGAGCTAAAA  250

seq1  TCTTCACAGTCTGTGTTTGCCCGGGCTTAGTGATTCACAGCTCTTGACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACAGTCTGTGTTTGCCCGGGCTTAGTGATTCACAGCTCTTGACCT  300

seq1  GCTGCCTGCTCTCCTCAGTTGTCTGTAGTTTGATGTAGGCTTGGGGTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCTGCTCTCCTCAGTTGTCTGTAGTTTGATGTAGGCTTGGGGTTTC  350

seq1  CTGGTCTTTTCCCTGACCAGTTGAGCATGACTACTGGTGTCATCCTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTTTTCCCTGACCAGTTGAGCATGACTACTGGTGTCATCCTTATT  400

seq1  CAGCTGACGTTTGGCATGTTGTGAGACTTTTGAGTGTCGGGTCTGAACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGACGTTTGGCATGTTGTGAGACTTTTGAGTGTCGGGTCTGAACTT  450

seq1  AGTAAGAGACACAGTCTCACAGTTGTTCGTATAAACCTAGAGAT  494
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGAGACACAGTCTCACAGTTGTTCGTATAAACCTAGAGAT  494