BAC Information

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BAC

Clone NameB6Ng01-209G10
Chromosome12 (Build37)
Map Location 59,772,622 - 59,957,551
singlet/doubletdoublet
Overlap genenone
Upstream geneSstr1, Clec14a
Downstream geneLOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33, LOC665628, LOC238199, LOC665639, LOC665644
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209G10.bB6Ng01-209G10.g
ACCGA028028GA028029
length764970
definitionB6Ng01-209G10.b B6Ng01-209G10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,956,788 - 59,957,551)(59,772,622 - 59,773,208)
sequence
gaattcaacctattgacaatggaactatcaccaatgcttagtgcaatcat
gatttctgggtccttatcagatgttatataaggaaaatttccccaaagat
tcatcagattctcaaccagatatgttaggaaggaccttcacaatctgacc
cttaaccccagtattgagttaccttcccctctatcagcaggttggtccca
ggcttgggacagaattagaactatcttgtgggagatcagaggtagctttt
tcatgaagccattctgattcttcctcttcttttccttcttcctcctctac
ttcttcctcttcttttccttctttttgtatctccttcttaagacaaggtg
tctttttatagccctacctgttctgcaactcacttggtagatcagtctgg
gtttaaattcagagtttcacctgcctttgctaggattaaaggtatgtgct
atcattatttttgaagagagattggcaggcaaaactgagacatttcataa
agatattctgtgctttaaagaagaagccttaagatgtgttgggataatag
aacgtatgtattttggaattagagggaggcaatactcagggtggaaaagg
ttaaacctgagtaggggttggggaaaggagaggctggaggtatggttgac
caaagttaaggatgtgtgaagaggctatatggaaacctagtactttataa
gctatgcaaatataactaaaaataatagtttgctggatgttccctgtata
gattgattatgttg

gaattcagacactcccaggctccaggtatctctgtgatgatttgatttag
tgtcctttggacaatacccaagagtcatatggctggaccatgtaagagtt
ttattttcaattgattgaaaactaatttcccccatggctatacaaattca
cattcctatcagcagtaaataaagattgttcttctcccacgtcctcacca
gcatttgtttttatttgtttcatatatgtttctaggctaaatggagagcg
atggaagatcaaagcagtcttaatttgtgtgcccctggtaacttaggatg
tggaacaccttctcaagtttttattggctatctttgtttattattttgag
aggtatctagtcagttcaggaaccattttattggttgaatggtttgggtt
tgggaagtttaggtttcaccgttttttttatataacctagaaatgattcc
ctggcctgggagttaattagtgaagatacatttaccaatcagtactgcct
ccttactccactgactatttccttcactatgaaaaacctttctgctttcc
tgcactcccatattttaatgcttgtaattatttcttgtgcttttagtata
aaaaaattcagaaaatctttggctatgcctatgtcttcaactgtcttccc
tgtttctctgaaacactttcaaagttttaggacctagattcaggcctttg
atccattttgcattgatttctgtgcaggatgaaagagataaatctagttt
cattcttctatgtttggaaatttggttttcgcagcaccatttgttgaaga
ggctgtcttttcctctgtgcatggttttgatacatctgccaaagcttagt
gatttcactcaagttttatagaagcttcaaaaccaaataccagagaattt
tgctgtgggaccaacctcaatctagaaattgcttgcataaaagcaggtca
gtggtggcactatgtccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_59956788_59957551
seq2: B6Ng01-209G10.b_33_796 (reverse)

seq1  CAACATAATCAATCTATACAGGGAACATCCAGCAAACTATTATTTTTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATAATCAATCTATACAGGGAACATCCAGCAAACTATTATTTTTAGT  50

seq1  TATATTTGCATAGCTTATAAAGTACTAGGTTTCCATATAGCCTCTTCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGCATAGCTTATAAAGTACTAGGTTTCCATATAGCCTCTTCACA  100

seq1  CATCCTTAACTTTGGTCAACCATACCTCCAGCCTCTCCTTTCCCCAACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTAACTTTGGTCAACCATACCTCCAGCCTCTCCTTTCCCCAACCC  150

seq1  CTACTCAGGTTTAACCTTTTCCACCCTGAGTATTGCCTCCCTCTAATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCAGGTTTAACCTTTTCCACCCTGAGTATTGCCTCCCTCTAATTCC  200

seq1  AAAATACATACGTTCTATTATCCCAACACATCTTAAGGCTTCTTCTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACATACGTTCTATTATCCCAACACATCTTAAGGCTTCTTCTTTAA  250

seq1  AGCACAGAATATCTTTATGAAATGTCTCAGTTTTGCCTGCCAATCTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGAATATCTTTATGAAATGTCTCAGTTTTGCCTGCCAATCTCTCT  300

seq1  TCAAAAATAATGATAGCACATACCTTTAATCCTAGCAAAGGCAGGTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAATAATGATAGCACATACCTTTAATCCTAGCAAAGGCAGGTGAAA  350

seq1  CTCTGAATTTAAACCCAGACTGATCTACCAAGTGAGTTGCAGAACAGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAATTTAAACCCAGACTGATCTACCAAGTGAGTTGCAGAACAGGTA  400

seq1  GGGCTATAAAAAGACACCTTGTCTTAAGAAGGAGATACAAAAAGAAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTATAAAAAGACACCTTGTCTTAAGAAGGAGATACAAAAAGAAGGAA  450

seq1  AAGAAGAGGAAGAAGTAGAGGAGGAAGAAGGAAAAGAAGAGGAAGAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGGAAGAAGTAGAGGAGGAAGAAGGAAAAGAAGAGGAAGAATCA  500

seq1  GAATGGCTTCATGAAAAAGCTACCTCTGATCTCCCACAAGATAGTTCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCTTCATGAAAAAGCTACCTCTGATCTCCCACAAGATAGTTCTAA  550

seq1  TTCTGTCCCAAGCCTGGGACCAACCTGCTGATAGAGGGGAAGGTAACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCCCAAGCCTGGGACCAACCTGCTGATAGAGGGGAAGGTAACTCA  600

seq1  ATACTGGGGTTAAGGGTCAGATTGTGAAGGTCCTTCCTAACATATCTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGGGGTTAAGGGTCAGATTGTGAAGGTCCTTCCTAACATATCTGGT  650

seq1  TGAGAATCTGATGAATCTTTGGGGAAATTTTCCTTATATAACATCTGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATCTGATGAATCTTTGGGGAAATTTTCCTTATATAACATCTGATA  700

seq1  AGGACCCAGAAATCATGATTGCACTAAGCATTGGTGATAGTTCCATTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCCAGAAATCATGATTGCACTAAGCATTGGTGATAGTTCCATTGTC  750

seq1  AATAGGTTGAATTC  764
      ||||||||||||||
seq2  AATAGGTTGAATTC  764


seq1: chr12_59772622_59773208
seq2: B6Ng01-209G10.g_432_1023

seq1  GGAACCATTTTATTGGTTGAATGGTTTGGGTTTGGGAAGTTTAGGTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCATTTTATTGGTTGAATGGTTTGGGTTTGGGAAGTTTAGGTTTCA  50

seq1  CCGTTTTTTTTATATAACCTAGAAATGATTCCCTGGCCTGGGAGTTAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTTTTTTTATATAACCTAGAAATGATTCCCTGGCCTGGGAGTTAATT  100

seq1  AGTGAAGATACATTTACCAATCAGTACTGCCTCCTTACTCCACTGACTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGATACATTTACCAATCAGTACTGCCTCCTTACTCCACTGACTAT  150

seq1  TTCCTTCACTATGAAAAACCTTTCTGCTTTCCTGCACTCCCATATTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCACTATGAAAAACCTTTCTGCTTTCCTGCACTCCCATATTTTAA  200

seq1  TGCTTGTAATTATTTCTTGTGCTTTTAGTATAAAAAAATTCAGAAAATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTAATTATTTCTTGTGCTTTTAGTATAAAAAAATTCAGAAAATCT  250

seq1  TTGGCTATGCCTATGTCTTCAACTGTCTTCCCTGTTTCTCTGAAACACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTATGCCTATGTCTTCAACTGTCTTCCCTGTTTCTCTGAAACACTT  300

seq1  TCAAAGTTTTAGGACCTAGATTCAGGCCTTTGATCCATTTTGCATTGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTTTTAGGACCTAGATTCAGGCCTTTGATCCATTTTGCATTGATT  350

seq1  TCTGTGCAGGATGAAAGAGATAAATCTAGTTTCATTCTTCTATGTTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCAGGATGAAAGAGATAAATCTAGTTTCATTCTTCTATGTTTGGA  400

seq1  AATTTGGTTTTCGCAGCACCATTTGTTGAAGAGGCTGTCTTTTCCTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGTTTTCGCAGCACCATTTGTTGAAGAGGCTGTCTTTTCCTCTGT  450

seq1  GCATGGTTTTGATACATCTGCCAAAGCTTAGGTGA-TTCACTCAAG-TTT  498
      |||||||||||||||||||||||||||||| |||| |||||||||| |||
seq2  GCATGGTTTTGATACATCTGCCAAAGCTTA-GTGATTTCACTCAAGTTTT  499

seq1  ATAGAAGCTTCAAAACCAAAATACCAGAGAA-TTTGCTGT-GGAACAACC  546
      ||||||||||||||||| ||||||||||||| |||||||| ||| |||||
seq2  ATAGAAGCTTCAAAACC-AAATACCAGAGAATTTTGCTGTGGGACCAACC  548

seq1  TC-ATCTAGAAATGGC-TGCAT-AAAGCAGGGCAGTGGTGGCAC  587
      || |||||||||| || ||||| |||||||| ||||||||||||
seq2  TCAATCTAGAAATTGCTTGCATAAAAGCAGGTCAGTGGTGGCAC  592


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