BAC Information

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BAC

Clone NameB6Ng01-210B24
Chromosome12 (Build37)
Map Location 44,249,470 - 44,408,428
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100039059, ENSMUSG00000066507, LOC100039081, LOC664854, Dnajb9, LOC100039062, Pnpla8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210B24.bB6Ng01-210B24.g
ACCGA028549GA028550
length1,047976
definitionB6Ng01-210B24.b B6Ng01-210B24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,249,470 - 44,250,366)(44,407,476 - 44,408,428)
sequence
gaattctattctttcctcatgtaattctgtgctgctcaataaaaaatgaa
gctctttgttagagacggggtgtcacaaaacagaaacaccaagacagatt
catacaacagtctatagacaggtatagattcagactcatacagtaaatag
aggaaggaaaacatggagggaagggaccatgaagtaaagagttcaaaact
tggcttgctcttggttaaactccaagagaatgattttttaaatgtaatat
atgtacagtgtgggtaattaggaggtaatcatcaaaacatttaatctact
ctaaaaatgtgagaagataataaatgagtattaattttcctactggagat
gggtagtggtcgaaaaatagttatataatagacctttaagaaaactaaat
gttggctcttgtttgatgattccctcagtctctgcttcatccccttttta
tgcttttcttgtaggcatgataaaatttgggtcaaaagttttgtggatac
ttggtatcttttttgctccactggggtttcttcttggctacaggatgtgg
ctcttcatgctccatatccctaccactgtgagtgacagctagggttaccc
ccattgattcttgggagcctcccttatcctaggcccctggtatatctttg
agatgccccaccaattacccctgccacctgcagattgccattaattttca
tggatatctggccatttctcttatctctccccacatctgatcctgtagtc
cccattacctctttgcctatctcctccacaattaccttccttcatatgac
tcctacaactactttatttcaccttctaagtgagattcatgtttcctctc
ttgggccttccttctttagcttctttgggtatgtgtagtgtagcatgggt
atcctgcattttatggcccatacctacttataaatgagtgtatacccatg
catgtgctttggttttgggtcacttcactcaagatgatattctcaagttc
aatccatttgcttgcccaatttcatgatgtctttgtttttatagcct

gaattcataaatgtttgtgtgtgtgtgtgggggggggtaaacctagaaaa
agtttcaggcagaaatggagaataaatgtgatcaaaataaaacatctatc
tttggcatttttaaaacaagaatatttttaaaaatcacaatgaacctaaa
atcaaatgagattaatatttatctaataagatataaattcaattggatta
tataaaaaatataagaccaaagaatatatttttcattgatttaaagcaaa
agtgtatgagatggtttggatgaaaaaaaaagggaaagaaggaaatggtg
taactaaactataatctcaaacaataaaataattaaatttaaagaaagag
aagtcatgttcatcagtttattagctgaattgtcatcatgcaaccttaag
ttttaaatgtgtttaatcatctaaactcaatacttctgagtaaaggaata
aaatatgaagattagaaggcttgatggacagtctttattctgatgtcagg
catatcacacttaaagctaatggaaaacatcattctgagccattgcagat
gagccctatcaacataatgaacttctgatgtcagctgggaaactgtcttg
aatgtcaggggatacactcttcatttgcagtgtttgattgttcaaataaa
tatttaatgaaaatattattagactattcagctgagtgagataaacgcat
ggtacaagtagctaaagaagctgactttagtattcattaaatgaaggagg
cataataattttatttttgcaatattatatgagcctttctgagaggtttt
gtactttttgcacttccctaagactatattaaaaggtgtcattttactgt
cataagtatgagattttttaaaggtggctttttatagttcatgattaata
tagaattatatttttaatagggaagaaagaaaaactatttttcaccaatt
ttcttggtaaaaaattaaggtgcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_44249470_44250366
seq2: B6Ng01-210B24.b_44_940

seq1  GAATTCTATTCTTTCCTCATGTAATTCTGTGCTGCTCAATAAAAAATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTCTTTCCTCATGTAATTCTGTGCTGCTCAATAAAAAATGAA  50

seq1  GCTCTTTGTTAGAGACGGGGTGTCACAAAACAGAAACACCAAGACAGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTGTTAGAGACGGGGTGTCACAAAACAGAAACACCAAGACAGATT  100

seq1  CATACAACAGTCTATAGACAGGTATAGATTCAGACTCATACAGTAAATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAACAGTCTATAGACAGGTATAGATTCAGACTCATACAGTAAATAG  150

seq1  AGGAAGGAAAACATGGAGGGAAGGGACCATGAAGTAAAGAGTTCAAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAAACATGGAGGGAAGGGACCATGAAGTAAAGAGTTCAAAACT  200

seq1  TGGCTTGCTCTTGGTTAAACTCCAAGAGAATGATTTTTTAAATGTAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGCTCTTGGTTAAACTCCAAGAGAATGATTTTTTAAATGTAATAT  250

seq1  ATGTACAGTGTGGGTAATTAGGAGGTAATCATCAAAACATTTAATCTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACAGTGTGGGTAATTAGGAGGTAATCATCAAAACATTTAATCTACT  300

seq1  CTAAAAATGTGAGAAGATAATAAATGAGTATTAATTTTCCTACTGGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAATGTGAGAAGATAATAAATGAGTATTAATTTTCCTACTGGAGAT  350

seq1  GGGTAGTGGTCGAAAAATAGTTATATAATAGACCTTTAAGAAAACTAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGTGGTCGAAAAATAGTTATATAATAGACCTTTAAGAAAACTAAAT  400

seq1  GTTGGCTCTTGTTTGATGATTCCCTCAGTCTCTGCTTCATCCCCTTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTCTTGTTTGATGATTCCCTCAGTCTCTGCTTCATCCCCTTTTTA  450

seq1  TGCTTTTCTTGTAGGCATGATAAAATTTGGGTCAAAAGTTTTGTGGATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCTTGTAGGCATGATAAAATTTGGGTCAAAAGTTTTGTGGATAC  500

seq1  TTGGTATCTTTTTTGCTCCACTGGGGTTTCTTCTTGGCTACAGGATGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATCTTTTTTGCTCCACTGGGGTTTCTTCTTGGCTACAGGATGTGG  550

seq1  CTCTTCATGCTCCATATCCCTACCACTGTGAGTGACAGCTAGGGTTACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCATGCTCCATATCCCTACCACTGTGAGTGACAGCTAGGGTTACCC  600

seq1  CCATTGATTCTTGGGAGCCTCCCTTATCCTAGGCCCCTGGTATATCTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGATTCTTGGGAGCCTCCCTTATCCTAGGCCCCTGGTATATCTTTG  650

seq1  AGATGCCCCACCAATTACCCCTGCCACCTGCAGATTGCCATTAATTTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCCCACCAATTACCCCTGCCACCTGCAGATTGCCATTAATTTTCA  700

seq1  TGGATATCTGGCCATTTCTCTTATCTCTCCCCACATCTGATCCTGTAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATCTGGCCATTTCTCTTATCTCTCCCCACATCTGATCCTGTAGTC  750

seq1  CCCATTACCTCTTTGCCTATCTCCTCCACAATTACCTTCCTTCATATGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTACCTCTTTGCCTATCTCCTCCACAATTACCTTCCTTCATATGAC  800

seq1  TCCTACAACTACTTTATTTCACCTTCTAAGTGAGATTCATGTTTCCTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACAACTACTTTATTTCACCTTCTAAGTGAGATTCATGTTTCCTCTC  850

seq1  TTGGGCCTTCCTTCTTTAGCTTCTTTGGGTATGTGTAGTGTAGCATG  897
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCCTTCCTTCTTTAGCTTCTTTGGGTATGTGTAGTGTAGCATG  897


seq1: chr12_44407476_44408428
seq2: B6Ng01-210B24.g_65_1040 (reverse)

seq1  GAGGCACCTTA--TTTTTACCAGGAAAATT-GTGGATAATAG-TCTTCTT  46
      |||||||||||  ||||||||| ||||||| ||| | ||||| | |||||
seq2  GAGGCACCTTAATTTTTTACCAAGAAAATTGGTGAAAAATAGTTTTTCTT  50

seq1  TC-TCCCTAT--AAAATAT-ATTCTATATT-ATCATGAACTATAAAA--G  89
      || |||||||  ||||||| |||||||||| ||||||||||||||||   
seq2  TCTTCCCTATTAAAAATATAATTCTATATTAATCATGAACTATAAAAAGC  100

seq1  CACCTT--AAAAATCTCATACTTATGACAGT-AAATGACACCTTTT-ATA  135
      ||||||  ||||||||||||||||||||||| |||||||||||||| |||
seq2  CACCTTTAAAAAATCTCATACTTATGACAGTAAAATGACACCTTTTAATA  150

seq1  TAGTCTTAGGG-AGTGC-AAAAGTACAAAACCTCTCAG-AAGGCTCATAT  182
      ||||||||||| ||||| |||||||||||||||||||| |||||||||||
seq2  TAGTCTTAGGGAAGTGCAAAAAGTACAAAACCTCTCAGAAAGGCTCATAT  200

seq1  AATA-TGCAAAA--TAAATTATTATGCCT-CTTCATTTAATGAATACT-A  227
      |||| |||||||   |||||||||||||| |||||||||||||||||| |
seq2  AATATTGCAAAAATAAAATTATTATGCCTCCTTCATTTAATGAATACTAA  250

seq1  AGTCAGCTTCTTTAGCTACTTGTACCATGCGTTTATCTCACTCAGCTGAA  277
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCTTCTTTAGCTACTTGTACCATGCGTTTATCTCACTCAGCTGAA  300

seq1  TAGTCTAATAATATTTTCATTAAATATTTATTTGAACAATCAAACACTGC  327
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTAATAATATTTTCATTAAATATTTATTTGAACAATCAAACACTGC  350

seq1  AAATGAAGAGTGTATCCCCTGACATTCAAGACAGTTTCCCAGCTGACATC  377
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGAGTGTATCCCCTGACATTCAAGACAGTTTCCCAGCTGACATC  400

seq1  AGAAGTTCATTATGTTGATAGGGCTCATCTGCAATGGCTCAGAATGATGT  427
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTCATTATGTTGATAGGGCTCATCTGCAATGGCTCAGAATGATGT  450

seq1  TTTCCATTAGCTTTAAGTGTGATATGCCTGACATCAGAATAAAGACTGTC  477
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATTAGCTTTAAGTGTGATATGCCTGACATCAGAATAAAGACTGTC  500

seq1  CATCAAGCCTTCTAATCTTCATATTTTATTCCTTTACTCAGAAGTATTGA  527
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGCCTTCTAATCTTCATATTTTATTCCTTTACTCAGAAGTATTGA  550

seq1  GTTTAGATGATTAAACACATTTAAAACTTAAGGTTGCATGATGACAATTC  577
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGATGATTAAACACATTTAAAACTTAAGGTTGCATGATGACAATTC  600

seq1  AGCTAATAAACTGATGAACATGACTTCTCTTTCTTTAAATTTAATTATTT  627
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATAAACTGATGAACATGACTTCTCTTTCTTTAAATTTAATTATTT  650

seq1  TATTGTTTGAGATTATAGTTTAGTTACACCATTTCCTTCTTTCCCTTTTT  677
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTTGAGATTATAGTTTAGTTACACCATTTCCTTCTTTCCCTTTTT  700

seq1  TTTTCATCCAAACCATCTCATACACTTTTGCTTTAAATCAATGAAAAATA  727
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATCCAAACCATCTCATACACTTTTGCTTTAAATCAATGAAAAATA  750

seq1  TATTCTTTGGTCTTATATTTTTTATATAATCCAATTGAATTTATATCTTA  777
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTGGTCTTATATTTTTTATATAATCCAATTGAATTTATATCTTA  800

seq1  TTAGATAAATATTAATCTCATTTGATTTTAGGTTCATTGTGATTTTTAAA  827
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATAAATATTAATCTCATTTGATTTTAGGTTCATTGTGATTTTTAAA  850

seq1  AATATTCTTGTTTTAAAAATGCCAAAGATAGATGTTTTATTTTGATCACA  877
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTTGTTTTAAAAATGCCAAAGATAGATGTTTTATTTTGATCACA  900

seq1  TTTATTCTCCATTTCTGCCTGAAACTTTTTCTAGGTTTACCCCCCCCCAC  927
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTCCATTTCTGCCTGAAACTTTTTCTAGGTTTACCCCCCCCCAC  950

seq1  ACACACACACAAACATTTATGAATTC  953
      ||||||||||||||||||||||||||
seq2  ACACACACACAAACATTTATGAATTC  976


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