MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-210F19
Chromosome	12 (Build37)
Map Location	74,882,030 - 75,076,831
singlet/doublet	doublet
Overlap gene	EG666385, LOC100041489, Hif1a, EG277089, Snapc1
Upstream gene	Ppm1a, Six6os1, Six6, LOC100041234, Six1, Six4, Mnat1, Trmt5, Slc38a6, EG666356, Tmem30b, 2210039B01Rik, Prkch
Downstream gene	Syt16, 1700086L19Rik, Dbpht2, LOC671971, Kcnh5
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ppm1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19042 MGI:99878
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Six6os1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75801 MGI:1923051
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Six6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20476 MGI:1341840
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041234 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041234
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Six1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20471 MGI:102780
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Six4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20474 MGI:106034
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mnat1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17420 MGI:106207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trmt5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76357 MGI:1923607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc38a6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625098 MGI:3648156
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 3 Proteins

name	EG666356 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666356 MGI:3646560
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Tmem30b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238257 MGI:2442082
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2210039B01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73644 MGI:1920894
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Prkch (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18755 MGI:97600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666385 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666385 MGI:3643190
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs

name	LOC100041489 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041489
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Hif1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15251 MGI:106918
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG277089 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:277089 MGI:3645720
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	Snapc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75627 MGI:1922877
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Syt16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238266 MGI:2673872
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700086L19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74284 MGI:1921534
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs

name	Dbpht2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:386753 MGI:2679513
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC671971 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671971
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Kcnh5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238271 MGI:3584508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppm1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560649 GeneID:19042 MGI:99878
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 1A, magnesium dependent, alpha isoform transcript_id : NM_008910.2

name	Six6os1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802018 GeneID:75801 MGI:1923051
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Six6 opposite strand transcript 1 transcript_id : NM_029444.2

name	Six6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801322 GeneID:20476 MGI:1341840
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sine oculis-related homeobox 6 homolog (Drosophila) transcript_id : NM_011384.3

name	Six1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802854 GeneID:20471 MGI:102780
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sine oculis-related homeobox 1 homolog (Drosophila) transcript_id : NM_009189.2

name	Six4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130178 GeneID:20474 MGI:106034
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sine oculis-related homeobox 4 homolog (Drosophila) transcript_id : NM_011382.2

name	Mnat1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89363037 GeneID:17420 MGI:106207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : menage a trois 1 transcript_id : NM_008612.2

name	Trmt5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981335 GeneID:76357 MGI:1923607
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) transcript_id : NM_029580.2

name	Slc38a6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392951 GeneID:625098 MGI:3648156
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 3 Proteins product : solute carrier family 38, member 6 transcript_id : XM_983207.1

name	EG666356 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392953 GeneID:666356 MGI:3646560
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG666356 transcript_id : XM_983277.1

name	Tmem30b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371461 GeneID:238257 MGI:2442082
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 30B transcript_id : NM_178715.3

name	2210039B01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263304 GeneID:73644 MGI:1920894
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2210039B01 gene transcript_id : XM_001476411.1

name	Prkch (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130661 GeneID:18755 MGI:97600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C, eta transcript_id : NM_008856.3

name	EG666385 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263306 GeneID:666385 MGI:3643190
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : predicted gene, EG666385 transcript_id : XM_983512.2

name	LOC100041489 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263308 GeneID:100041489
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100041489 transcript_id : XM_001476471.1

name	Hif1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7363432 GeneID:15251 MGI:106918
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypoxia inducible factor 1, alpha subunit transcript_id : NM_010431.1

name	EG277089 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263302 GeneID:277089 MGI:3645720
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : predicted gene, EG277089 transcript_id : XM_204772.4

name	Snapc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386213 GeneID:75627 MGI:1922877
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : small nuclear RNA activating complex, polypeptide 1 transcript_id : NM_178392.4

name	Syt16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121674808 GeneID:238266 MGI:2673872
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synaptotagmin XVI transcript_id : NM_172804.2

name	1700086L19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392961 GeneID:74284 MGI:1921534
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs product : RIKEN cDNA 1700086L19 gene transcript_id : XM_358420.3

name	Dbpht2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115311549 GeneID:386753 MGI:2679513
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA binding protein with his-thr domain transcript_id : NM_198866.2

name	Kcnh5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382566 GeneID:238271 MGI:3584508
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, subfamily H (eag-related), member 5 transcript_id : NM_172805.2

name	Ppm1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679443 CCDS:CCDS25970.1 GeneID:19042 MGI:99878
definition	GO_component : GO:0008287 - protein serine/threonine phosphatase complex [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IDA]; GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA] GO_process : GO:0006470 - protein amino acid dephosphorylation [Evidence IDA] codon_start : 1 note : Mpp alpha product : protein phosphatase 1A, magnesium dependent, alpha isoform protein_id : NP_032936.1

name	Six6os1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313086 CCDS:CCDS25971.1 GeneID:75801 MGI:1923051
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0007275 - development [Evidence IEA]; GO:0001747 - eye development (sensu Mammalia) [Evidence NAS]; GO:0051090 - regulation of transcription factor activity [Evidence NAS] codon_start : 1 note : Six6 antisense product : Six6 opposite strand transcript 1 protein_id : NP_083720.1

name	Six6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755524 CCDS:CCDS25972.1 GeneID:20476 MGI:1341840
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : sine oculis-related homeobox 6 homolog protein_id : NP_035514.1

name	Six1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859494 CCDS:CCDS25973.1 GeneID:20471 MGI:102780
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0048704 - embryonic skeletal morphogenesis [Evidence IGI]; GO:0042472 - inner ear morphogenesis [Evidence IGI]; GO:0051451 - myoblast migration [Evidence IGI]; GO:0045664 - regulation of neuron differentiation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0007519 - striated muscle development [Evidence IGI]; GO:0006350 - transcription [Evidence IEA]; GO:0001657 - ureteric bud development [Evidence IGI] codon_start : 1 exception : mismatches in translation product : sine oculis homeobox homolog 1 protein_id : NP_033215.1

name	Six4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859632 CCDS:CCDS25974.1 GeneID:20474 MGI:106034
definition	GO_component : GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0048704 - embryonic skeletal morphogenesis [Evidence IGI]; GO:0042472 - inner ear morphogenesis [Evidence IGI]; GO:0051451 - myoblast migration [Evidence IGI]; GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007519 - striated muscle development [Evidence IGI] codon_start : 1 product : sine oculis-related homeobox 4 homolog protein_id : NP_035512.1

name	Mnat1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89363038 GeneID:17420 MGI:106207
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : menage a trois 1 protein_id : NP_032638.2

name	Trmt5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313170 GeneID:76357 MGI:1923607
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : TRM5 tRNA methyltransferase 5 homolog protein_id : NP_083856.1

name	Slc38a6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392952 GeneID:625098 MGI:3648156
definition	codon_start : 1 product : solute carrier family 38, member 6 protein_id : XP_988301.1

name	EG666356 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392954 GeneID:666356 MGI:3646560
definition	codon_start : 1 product : hypothetical protein protein_id : XP_988371.1

name	Tmem30b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520139 CCDS:CCDS25975.1 GeneID:238257 MGI:2442082
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence IEA] codon_start : 1 product : transmembrane protein 30B protein_id : NP_848830.1

name	2210039B01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263305 GeneID:73644 MGI:1920894
definition	codon_start : 1 product : hypothetical protein LOC73644 protein_id : XP_001476461.1

name	Prkch (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543511 CCDS:CCDS25976.1 GeneID:18755 MGI:97600
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : protein kinase C, eta protein_id : NP_032882.2

name	EG666385 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263307 GeneID:666385 MGI:3643190
definition	codon_start : 1 product : hypothetical protein protein_id : XP_988606.2

name	LOC100041489 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263309 GeneID:100041489
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476521.1

name	Hif1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7363433 CCDS:CCDS25977.1 GeneID:15251 MGI:106918
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0009434 - flagellum (sensu Eukaryota) [Evidence IDA]; GO:0005792 - microsome [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0035035 - histone acetyltransferase binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence ISS]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0000155 - two-component sensor activity [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IMP]; GO:0001947 - heart looping [Evidence IMP]; GO:0042592 - homeostasis [Evidence ISS]; GO:0001755 - neural crest cell migration [Evidence IMP]; GO:0045941 - positive regulation of transcription [Evidence ISS]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0042981 - regulation of apoptosis [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] [Evidence ISS]; GO:0001666 - response to hypoxia [Evidence ISS] [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypoxia inducible factor 1, alpha subunit protein_id : NP_034561.1

name	EG277089 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263303 GeneID:277089 MGI:3645720
definition	codon_start : 1 product : similar to endothelial monocyte-activating polypeptide protein_id : XP_204772.4

name	Snapc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30409986 CCDS:CCDS25978.1 GeneID:75627 MGI:1922877
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : small nuclear RNA activating complex, polypeptide 1 protein_id : NP_848479.1

name	Syt16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121674809 GeneID:238266 MGI:2673872
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS] GO_function : GO:0005544 - calcium-dependent phospholipid binding [Evidence IDA]; GO:0005543 - phospholipid binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA] codon_start : 1 note : synaptotagmin XIV-related; synaptotagmin 14-like product : synaptotagmin XVI protein_id : NP_766392.2

name	1700086L19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38050426 GeneID:74284 MGI:1921534
definition	codon_start : 1 product : hypothetical protein LOC74284 protein_id : XP_358420.1

name	Dbpht2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38524610 CCDS:CCDS25979.1 GeneID:386753 MGI:2679513
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : DNA binding protein with his-thr domain protein_id : NP_942566.1

name	Kcnh5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370198 CCDS:CCDS25980.1 GeneID:238271 MGI:3584508
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005516 - calmodulin binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0000155 - two-component sensor activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 exception : mismatches in translation note : potassium channel Eag2 product : potassium voltage-gated channel, subfamily H, member 5 protein_id : NP_766393.1

name	LOC100041234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041234
definition	number : 3 pseudo : _no_value

name	LOC100041234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041234
definition	number : 2 pseudo : _no_value

name	LOC100041234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041234
definition	number : 1 pseudo : _no_value

name	LOC671971 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671971
definition	number : 1 pseudo : _no_value

name	LOC671971 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671971
definition	number : 2 pseudo : _no_value

name	LOC671971 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671971
definition	number : 3 pseudo : _no_value

clone name	MSMg01-132O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293F03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-429A01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-140N20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-174F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063J19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-195B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146K20
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-210F19.b	B6Ng01-210F19.g
ACC	GA028719	GA028720
length	1,116	1,103
definition	B6Ng01-210F19.b	B6Ng01-210F19.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(74,882,030 - 74,883,137)	(75,075,728 - 75,076,831)
sequence	gaattctgtcgtccttttaggtttagctacaagattcatttagttcactt ctgaccaattagcatgagggccacacccatcctgggcactgactgggcac atgcagcatgctgtgccaccagaagccaagatacccaagatattcagtaa ctcctgccatgtccaaggacctgaagccatggcagagcctctaccctctt ctctttaaagcaagctctctggagatgtattgtggtaaaaagagcctcca caggcctgtagattcttctgaaaagacagccctagatgtcccctgccaca tgtcatagctcttccagatccccacagttgtctgtcttatgccaccaagg cggttattacctgacagaggcttcattcttccagtggcttgagccgcagc tagaagaatttgggtgagacaaagggaaggttgtgttaggaccaagtgtg gacgtgttcaagtgggttgccagaagtgagaatctttatagagacatttc aaatttagaaaccagggacagtctagcagtcatttgaccggacagtgcca aaaataccctgaatgagctctcaaggttttccagccttgtgctctgctgg ctaagaataagtgggtggctgtgctcaatgggcctctctacccttactga taacgtccctgtcatccattgaaatcccagtcagatttgctctttgtcca cctctgggcaatctttatgccttatctcatctccacatgcaccctgtgct ctctcggtctcaagattcttttttagacacactcagatcactcattccca tagccatgtactcaccagcaccccttatccagctgcctttcctatttctc atgcttacccatgcgcaaaagggaagaaggaatggcaggctccctcagta gcagatgcaagcagagctgttgccagaagaaaaagggactccagggtgct tgcctctttcctctattggctgcagttctcaacttgtggggtcacaacct cttccgggggggggggtgttcaaacagtcttttgacatgaagtcacatta agaatattatgatgatcagatgtttacattacatcataatcagtagccaa attacaatttatgaag	gaattctcacatctgacatacacttcaattctccctccccagcctcaata ccggaaaaagaaaacatgctcagagcctctaagtttcctttctcaaaccc ccgaggtcaccagaaatgataaagtcattaagtatctgttaatgtttcta ctgttttctgcctttatacagcatccgggtaattcttgaaaaaaatcaaa tcattaaaatatacagttgtttaagcctcaagtaatgaggccatttcaca aacactccattacaaatgaaaatcaggggtagttcaatgaatttaactga aggagagaaggtttttagaatgcattacttattggcctttcctagatgta aacttaattcacatacatcattactaataaagttatcctgattaacaagt ctgatataatctctagggtctctttcagcaacaagagctcaagaagctat gaaattgggttcatttttaacattaaattccatgatttttccaaacaagt ctctttctcttgttgtgggacagaatcttactatgtagctcaagctggcc gtaaactggcaatcttcctgcctcagcctccagagtgctaggattacaga taccccccaaccaaccctgctctagtccatcctagaaataaaggcctact ctccagcaccaggtcttttaaaaaccaaagtacctttgcttctggaagat ctcttccttcctgctggtcctgctggttctctggttctctttctcttagc tgctctgccttgcacttgtccagacccagagtcagagtcagaagagtcaa gcttggactggcgatgcctcctggacttggacacctttgtgacagaaacc cagttactcaaatgaagaacaaaatggtctgaggacagagcacaggagtg agagaggggcatctgccatggtgctctttcccacacaggcctgcactaca cgtaactgtaccgccagattcctgcagctgcctcaccaccagctcacgct gggttaaatgcgctgctgtcaaacaagaacgaataatgaatcacagacag agtcagaagtcaggtctggactcagaaagttcctgaagtacctcccaatg ctt
quality values	Open. 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Hide. 62 38 51 47 62 62 62 47 51 62 59 41 30 24 28 20 26 27 32 28 28 24 28 28 28 20 46 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 56 59 59 50 54 48 56 62 62 62 62 62 62 62 59 59 62 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 56 56 62 62 62 62 62 62 62 56 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 62 62 62 62 62 62 62 54 62 62 54 62 62 62 62 62 62 47 42 62 62 62 54 62 62 62 62 58 54 58 58 58 54 58 54 58 58 58 54 49 58 58 58 58 58 58 46 58 54 58 54 58 54 54 54 54 45 54 54 58 58 58 58 54 54 58 54 47 58 58 58 58 58 58 39 41 54 46 54 58 46 58 58 58 49 54 58 58 58 54 54 54 52 41 52 58 52 52 52 44 52 50 47 48 49 42 51 49 53 58 39 58 58 58 45 48 51 58 45 33 42 53 53 50 50 58 53 52 58 49 54 49 49 42 49 51 51 45 34 51 50 47 47 47 58 50 46 49 54 50 49 51 50 52 50 58 50 51 46 54 46 58 58 50 50 52 58 51 50 46 20 48 51 50 51 58 50 50 42 48 40 50 50 39 48 50 50 41 58 49 50 51 41 43 37 38 32 44 49 43 30 42 50 51 58 50 49 50 37 23 31 50 49 50 50 51 51 32 52 58 50 41 49 39 51 36 32 53 39 53 50 37 38 49 51 30 51 52 51 37 38 51 54 30 32 52 32 52 38 37 49 39 26 44 33 32 47 37 50 54 31 45 42 39 37 49 54 21 26 26 37 39 37 49 23 53 45 45 29 33 35 40 33 18 37 33 41 52 33 32 30 31 38 53 34 26 53 33 34 53 24 44 51 35 41 40 29 52 40 40 31 51 21 40 29 40 29 53 42 23 53 18 33 34 29 47 36 33 30 13 25 41 32 26 34 31 18 32 34 53 30 32 28 33 35 23 31 34 30 21 18 18 19 28 15 25 18 19 24 31 30 31 37 23 30 30 30 31 24 25 31 45 40 32 25 33 11 18 31 29 31 31 31 36 32 29 46 10 27 31 26 45 21 34 28 27 27 30 46 15 13 20 31 31 35 35 32 43 18 32 30 19 21 28 42 19 33 19 22 31 24 25 29 11 27 31 31 24 37 10 30 20 48 46 31 29 33 34 33 36 38 19 32 16 25 32 27 16 31 21 32 32 32 37 28 16 29 23 18 26 16 21 22 18 21 13 20 26 24 21 22 23 35 27 32 35 32 21 31 21 26 29 26 31 23 25 28 26 31 18 35 24 25 42 13 24 10 27 19 29 18 24 18 30 24 19 21 17 24 24 24 16 38 13 6 30 13 19 32 21 28 32 27 26 25 20 33 36 19 4 4 31 43 24 13 8 9 4 10 23 18 34 28 32 14 23 14 36 9 8 12 23 10 14 15 25 13 34 6 6 13 33 27 32 14 18 23 9 19 20 18 8 9 8 4 20 25 6 5 10 20 23 26 17 15 16 10 6 15 11 20 13 8 10 8 27 13 16 8 7 5 18 19 3 4 9 10 27 8 3 3 5 6 30 6 15 28 16 16 8 33 24 6 11 9 9 6 9 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_74882030_74883137
seq2: B6Ng01-210F19.b_45_1160

seq1  GAATTCTGTCGTCCTTTTAGGTTTAGCTACAAGATTCATTTAGTTCACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCGTCCTTTTAGGTTTAGCTACAAGATTCATTTAGTTCACTT  50

seq1  CTGACCAATTAGCATGAGGGCCACACCCATCCTGGGCACTGACTGGGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCAATTAGCATGAGGGCCACACCCATCCTGGGCACTGACTGGGCAC  100

seq1  ATGCAGCATGCTGTGCCACCAGAAGCCAAGATACCCAAGATATTCAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCATGCTGTGCCACCAGAAGCCAAGATACCCAAGATATTCAGTAA  150

seq1  CTCCTGCCATGTCCAAGGACCTGAAGCCATGGCAGAGCCTCTACCCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGCCATGTCCAAGGACCTGAAGCCATGGCAGAGCCTCTACCCTCTT  200

seq1  CTCTTTAAAGCAAGCTCTCTGGAGATGTATTGTGGTAAAAAGAGCCTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTAAAGCAAGCTCTCTGGAGATGTATTGTGGTAAAAAGAGCCTCCA  250

seq1  CAGGCCTGTAGATTCTTCTGAAAAGACAGCCCTAGATGTCCCCTGCCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTGTAGATTCTTCTGAAAAGACAGCCCTAGATGTCCCCTGCCACA  300

seq1  TGTCATAGCTCTTCCAGATCCCCACAGTTGTCTGTCTTATGCCACCAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATAGCTCTTCCAGATCCCCACAGTTGTCTGTCTTATGCCACCAAGG  350

seq1  CGGTTATTACCTGACAGAGGCTTCATTCTTCCAGTGGCTTGAGCCGCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTATTACCTGACAGAGGCTTCATTCTTCCAGTGGCTTGAGCCGCAGC  400

seq1  TAGAAGAATTTGGGTGAGACAAAGGGAAGGTTGTGTTAGGACCAAGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAATTTGGGTGAGACAAAGGGAAGGTTGTGTTAGGACCAAGTGTG  450

seq1  GACGTGTTCAAGTGGGTTGCCAGAAGTGAGAATCTTTATAGAGACATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTGTTCAAGTGGGTTGCCAGAAGTGAGAATCTTTATAGAGACATTTC  500

seq1  AAATTTAGAAACCAGGGACAGTCTAGCAGTCATTTGACCGGACAGTGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAGAAACCAGGGACAGTCTAGCAGTCATTTGACCGGACAGTGCCA  550

seq1  AAAATACCCTGAATGAGCTCTCAAGGTTTTCCAGCCTTGTGCTCTGCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACCCTGAATGAGCTCTCAAGGTTTTCCAGCCTTGTGCTCTGCTGG  600

seq1  CTAAGAATAAGTGGGTGGCTGTGCTCAATGGGCCTCTCTACCCTTACTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAATAAGTGGGTGGCTGTGCTCAATGGGCCTCTCTACCCTTACTGA  650

seq1  TAACGTCCCTGTCATCCATTGAAATCCCAGTCAGATTTGCTCTTTGTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGTCCCTGTCATCCATTGAAATCCCAGTCAGATTTGCTCTTTGTCCA  700

seq1  CCTCTGGGCAATCTTTATGCCTTATCTCATCTCCACATGCACCCTGTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGGCAATCTTTATGCCTTATCTCATCTCCACATGCACCCTGTGCT  750

seq1  CTCTCGGTCTCAAGATTCTTTTTTAGACACACTCAGATCACTCATTCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCGGTCTCAAGATTCTTTTTTAGACACACTCAGATCACTCATTCCCA  800

seq1  TAGCCATGTACTCACCAGCACCCCTTATCCAGCTGCCTTTCCTATTTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATGTACTCACCAGCACCCCTTATCCAGCTGCCTTTCCTATTTCTC  850

seq1  ATGCTTACCCATGCGCAAAAGGGAAGAAGGAATGGCAGGCTCCCTCAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTACCCATGCGCAAAAGGGAAGAAGGAATGGCAGGCTCCCTCAGTA  900

seq1  GCAGATGCAAGCAGAGCTGTTGCCAGAAGAGAAA-GGACTCCAGGGTGCT  949
      |||||||||||||||||||||||||||||| ||| |||||||||||||||
seq2  GCAGATGCAAGCAGAGCTGTTGCCAGAAGAAAAAGGGACTCCAGGGTGCT  950

seq1  TGC--CCTTCCTCTA-TGGCTGCAGTTCTCAACTTGT-GGGTCACAACCT  995
      |||  | |||||||| ||||||||||||||||||||| ||||||||||||
seq2  TGCCTCTTTCCTCTATTGGCTGCAGTTCTCAACTTGTGGGGTCACAACCT  1000

seq1  CTTTC-GGGGGGGGGGTG-TCAAACAGCCTTTTGACA-GAGGTCACATAT  1042
      ||| | |||||||||||| |||||||| ||||||||| || ||||||| |
seq2  CTTCCGGGGGGGGGGGTGTTCAAACAGTCTTTTGACATGAAGTCACAT-T  1049

seq1  AAG-ATATCCTGAAGATTAGATGTTTACATTACAATTCATAA-CAGTAGC  1090
      ||| ||||  ||| ||| ||||||||||||||||  |||||| |||||||
seq2  AAGAATATTATGATGATCAGATGTTTACATTACA--TCATAATCAGTAGC  1097

seq1  AAAATTACAA-TTATGAAG  1108
       ||||||||| ||||||||
seq2  CAAATTACAATTTATGAAG  1116

seq1: chr12_75075728_75076831
seq2: B6Ng01-210F19.g_67_1169 (reverse)

seq1  AAGCA-TGGGAGGTACCTCAAGGGAACTTTTCTGAGT-CAGACCTGACTT  48
      ||||| |||||||||| |||  ||||| ||||||||| ||||||||||||
seq2  AAGCATTGGGAGGTACTTCA--GGAAC-TTTCTGAGTCCAGACCTGACTT  47

seq1  CTGACTCTGTCTGTGATTCATTA-TCGTTCTTG-TTGACAGCAGCGGCAT  96
      ||||||||||||||||||||||| ||||||||| ||||||||||| ||| 
seq2  CTGACTCTGTCTGTGATTCATTATTCGTTCTTGTTTGACAGCAGC-GCA-  95

seq1  TTTAACCCAGCGTGAGCTGGTGGTGAGGCAGCTGCAGGAATCTGGCGGTA  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCCAGCGTGAGCTGGTGGTGAGGCAGCTGCAGGAATCTGGCGGTA  145

seq1  CAGTTACGTGTAGTGCAGGCCTGTGTGGGAAAGAGCACCATGGCAGATGC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACGTGTAGTGCAGGCCTGTGTGGGAAAGAGCACCATGGCAGATGC  195

seq1  CCCTCTCTCACTCCTGTGCTCTGTCCTCAGACCATTTTGTTCTTCATTTG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCTCACTCCTGTGCTCTGTCCTCAGACCATTTTGTTCTTCATTTG  245

seq1  AGTAACTGGGTTTCTGTCACAAAGGTGTCCAAGTCCAGGAGGCATCGCCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTGGGTTTCTGTCACAAAGGTGTCCAAGTCCAGGAGGCATCGCCA  295

seq1  GTCCAAGCTTGACTCTTCTGACTCTGACTCTGGGTCTGGACAAGTGCAAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAGCTTGACTCTTCTGACTCTGACTCTGGGTCTGGACAAGTGCAAG  345

seq1  GCAGAGCAGCTAAGAGAAAGAGAACCAGAGAACCAGCAGGACCAGCAGGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCAGCTAAGAGAAAGAGAACCAGAGAACCAGCAGGACCAGCAGGA  395

seq1  AGGAAGAGATCTTCCAGAAGCAAAGGTACTTTGGTTTTTAAAAGACCTGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGATCTTCCAGAAGCAAAGGTACTTTGGTTTTTAAAAGACCTGG  445

seq1  TGCTGGAGAGTAGGCCTTTATTTCTAGGATGGACTAGAGCAGGGTTGGTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAGAGTAGGCCTTTATTTCTAGGATGGACTAGAGCAGGGTTGGTT  495

seq1  GGGGGGTATCTGTAATCCTAGCACTCTGGAGGCTGAGGCAGGAAGATTGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGTATCTGTAATCCTAGCACTCTGGAGGCTGAGGCAGGAAGATTGC  545

seq1  CAGTTTACGGCCAGCTTGAGCTACATAGTAAGATTCTGTCCCACAACAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTACGGCCAGCTTGAGCTACATAGTAAGATTCTGTCCCACAACAAG  595

seq1  AGAAAGAGACTTGTTTGGAAAAATCATGGAATTTAATGTTAAAAATGAAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAGACTTGTTTGGAAAAATCATGGAATTTAATGTTAAAAATGAAC  645

seq1  CCAATTTCATAGCTTCTTGAGCTCTTGTTGCTGAAAGAGACCCTAGAGAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTCATAGCTTCTTGAGCTCTTGTTGCTGAAAGAGACCCTAGAGAT  695

seq1  TATATCAGACTTGTTAATCAGGATAACTTTATTAGTAATGATGTATGTGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAGACTTGTTAATCAGGATAACTTTATTAGTAATGATGTATGTGA  745

seq1  ATTAAGTTTACATCTAGGAAAGGCCAATAAGTAATGCATTCTAAAAACCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTTTACATCTAGGAAAGGCCAATAAGTAATGCATTCTAAAAACCT  795

seq1  TCTCTCCTTCAGTTAAATTCATTGAACTACCCCTGATTTTCATTTGTAAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTTCAGTTAAATTCATTGAACTACCCCTGATTTTCATTTGTAAT  845

seq1  GGAGTGTTTGTGAAATGGCCTCATTACTTGAGGCTTAAACAACTGTATAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGTTTGTGAAATGGCCTCATTACTTGAGGCTTAAACAACTGTATAT  895

seq1  TTTAATGATTTGATTTTTTTCAAGAATTACCCGGATGCTGTATAAAGGCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGATTTGATTTTTTTCAAGAATTACCCGGATGCTGTATAAAGGCA  945

seq1  GAAAACAGTAGAAACATTAACAGATACTTAATGACTTTATCATTTCTGGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAGTAGAAACATTAACAGATACTTAATGACTTTATCATTTCTGGT  995

seq1  GACCTCGGGGGTTTGAGAAAGGAAACTTAGAGGCTCTGAGCATGTTTTCT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCGGGGGTTTGAGAAAGGAAACTTAGAGGCTCTGAGCATGTTTTCT  1045

seq1  TTTTCCGGTATTGAGGCTGGGGAGGGAGAATTGAAGTGTATGTCAGATGT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCGGTATTGAGGCTGGGGAGGGAGAATTGAAGTGTATGTCAGATGT  1095

seq1  GAGAATTC  1104
      ||||||||
seq2  GAGAATTC  1103

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information