MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-211G08
Chromosome	12 (Build37)
Map Location	102,348,596 - 102,540,586
singlet/doublet	doublet
Overlap gene	4930463M05Rik, Mylf-ps
Upstream gene	Psmc1, BC002230, Calm1, Ttc7b, Rps6ka5, LOC100040123, 9030617O03Rik, EG667148, Gpr68, 0610010D24Rik, LOC100040184, Smek1
Downstream gene	4932415G16Rik, Mtac2d1, Fbln5, Trip11, Atxn3, LOC100040305, LOC100040297, Cpsf2, Slc24a4, Rin3
Link	Open Mouse BAC browser

Click to get alignment info.

name	Psmc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19179 MGI:106054
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC002230 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217827 MGI:2670969
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 105 ESTs, 5 Proteins

name	Calm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12313 MGI:88251
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc7b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104718 MGI:2144724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 126 ESTs, 2 Proteins

name	Rps6ka5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73086 MGI:1920336
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040123 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040123
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 128 ESTs, 9 Proteins pseudo : _no_value

name	9030617O03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217830 MGI:2444813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667148 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667148 MGI:3647858
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein

name	Gpr68 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238377 MGI:2441763
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	0610010D24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68339 MGI:1915589
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040184 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Smek1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68734 MGI:1915984
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930463M05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74947 MGI:1922197
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 86 Proteins

name	Mylf-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17902 MGI:97270
definition	note : myosin light chain, alkali, fast skeletal muscle, pseudogene pseudo : _no_value

name	4932415G16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:271036 MGI:2443988
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtac2d1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74413 MGI:1921663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Fbln5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23876 MGI:1346091
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trip11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109181 MGI:1924393
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 46 ESTs, 4 Proteins

name	Atxn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110616 MGI:1099442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040305 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040305
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs

name	LOC100040297 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040297
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs

name	Cpsf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:51786 MGI:1861601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc24a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238384 MGI:2447362
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rin3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217835 MGI:2385708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Psmc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354619 GeneID:19179 MGI:106054
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protease (prosome, macropain) 26S subunit, ATPase 1 transcript_id : NM_008947.2

name	BC002230 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94393021 GeneID:217827 MGI:2670969
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 105 ESTs, 5 Proteins product : cDNA sequence BC002230, transcript variant 1 transcript_id : XM_484171.3

name	Calm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130270 GeneID:12313 MGI:88251
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calmodulin 1 transcript_id : NM_009790.4

name	Ttc7b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263479 GeneID:104718 MGI:2144724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 126 ESTs, 2 Proteins product : tetratricopeptide repeat domain 7B, transcript variant 1 transcript_id : XM_127105.8

name	Rps6ka5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130094 GeneID:73086 MGI:1920336
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein S6 kinase, polypeptide 5 transcript_id : NM_153587.2

name	9030617O03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373369 GeneID:217830 MGI:2444813
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9030617O03 gene transcript_id : NM_145448.3

name	EG667148 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94393025 GeneID:667148 MGI:3647858
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein product : predicted gene, EG667148 transcript_id : XM_001000972.1

name	Gpr68 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342018 GeneID:238377 MGI:2441763
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 68 transcript_id : NM_175493.2

name	0610010D24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130255 GeneID:68339 MGI:1915589
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 0610010D24 gene transcript_id : NM_026681.4

name	LOC100040184 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263488 GeneID:100040184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100040184 transcript_id : XM_001474283.1

name	Smek1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46849744 GeneID:68734 MGI:1915984
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SMEK homolog 1, suppressor of mek1 (Dictyostelium) transcript_id : NM_211355.1

name	4930463M05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263483 GeneID:74947 MGI:1922197
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 86 Proteins product : RIKEN cDNA 4930463M05 gene transcript_id : XM_909198.3

name	4932415G16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27370535 GeneID:271036 MGI:2443988
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932415G16 gene transcript_id : NM_173023.1

name	Mtac2d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:131889847 GeneID:74413 MGI:1921663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : membrane targeting (tandem) C2 domain containing 1 transcript_id : NM_001082976.1

name	Mtac2d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:131888111 GeneID:74413 MGI:1921663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : membrane targeting (tandem) C2 domain containing 1 transcript_id : NM_028924.2

name	Fbln5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130029 GeneID:23876 MGI:1346091
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibulin 5 transcript_id : NM_011812.3

name	Trip11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263492 GeneID:109181 MGI:1924393
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 46 ESTs, 4 Proteins product : thyroid hormone receptor interactor 11, transcript variant 3 transcript_id : XM_001001171.2

name	Atxn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802862 GeneID:110616 MGI:1099442
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ataxin 3 transcript_id : NM_029705.2

name	LOC100040305 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263497 GeneID:100040305
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs product : hypothetical protein LOC100040305 transcript_id : XM_001474563.1

name	LOC100040297 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263493 GeneID:100040297
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs product : hypothetical protein LOC100040297 transcript_id : XM_001474546.1

name	Cpsf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542417 GeneID:51786 MGI:1861601
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cleavage and polyadenylation specific factor 2 transcript_id : NM_016856.2

name	Slc24a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130080 GeneID:238384 MGI:2447362
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 transcript_id : NM_172152.2

name	Rin3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801790 GeneID:217835 MGI:2385708
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ras and Rab interactor 3 transcript_id : NM_177620.3

name	Psmc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679501 GeneID:19179 MGI:106054
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005829 - cytosol [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0030163 - protein catabolism [Evidence IEA] codon_start : 1 product : protease (prosome, macropain) 26S subunit, ATPase 1 protein_id : NP_032973.1

name	BC002230 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82942855 GeneID:217827 MGI:2670969
definition	codon_start : 1 product : hypothetical protein LOC217827 isoform 1 protein_id : XP_484171.2

name	Calm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753244 GeneID:12313 MGI:88251
definition	GO_function : GO:0005509 - calcium ion binding [Evidence TAS] GO_process : GO:0007049 - cell cycle [Evidence IDA] codon_start : 1 product : calmodulin 1 protein_id : NP_033920.1

name	Ttc7b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263480 GeneID:104718 MGI:2144724
definition	codon_start : 1 exception : unclassified translation discrepancy product : similar to tetratricopeptide repeat domain 7B isoform 1 protein_id : XP_127105.7 transl_except : (pos:complement(101759040..101759042),aa:OTHER)

name	Rps6ka5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956386 CCDS:CCDS26107.1 GeneID:73086 MGI:1920336
definition	GO_component : GO:0005634 - nucleus [Evidence IEP] [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0007243 - protein kinase cascade [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] codon_start : 1 product : ribosomal protein S6 kinase, polypeptide 5 protein_id : NP_705815.1

name	9030617O03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981784 CCDS:CCDS26108.1 GeneID:217830 MGI:2444813
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] codon_start : 1 product : hypothetical protein LOC217830 protein_id : NP_663423.2

name	EG667148 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94393026 GeneID:667148 MGI:3647858
definition	codon_start : 1 product : similar to ribosomal protein protein_id : XP_001000972.1

name	Gpr68 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28202053 CCDS:CCDS26109.1 GeneID:238377 MGI:2441763
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 68 protein_id : NP_780702.1

name	0610010D24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059089 CCDS:CCDS26110.1 GeneID:68339 MGI:1915589
definition	codon_start : 1 product : DVL-binding protein DAPLE protein_id : NP_080957.2

name	LOC100040184 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263489 GeneID:100040184
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474333.1

name	Smek1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46849745 CCDS:CCDS26111.1 GeneID:68734 MGI:1915984
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : SMEK homolog 1, suppressor of mek1 protein_id : NP_997594.1

name	4930463M05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263484 GeneID:74947 MGI:1922197
definition	codon_start : 1 product : hypothetical protein LOC74947 protein_id : XP_914291.3

name	4932415G16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370536 CCDS:CCDS26112.1 GeneID:271036 MGI:2443988
definition	codon_start : 1 exception : mismatches in translation note : CatSper channel subunit beta product : hypothetical protein LOC271036 protein_id : NP_766611.1

name	Mtac2d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:131889848 GeneID:74413 MGI:1921663
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 product : membrane targeting (tandem) C2 domain containing 1 protein_id : NP_001076445.1

name	Mtac2d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312724 GeneID:74413 MGI:1921663
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 product : membrane targeting (tandem) C2 domain containing 1 protein_id : NP_083200.1

name	Fbln5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753824 GeneID:23876 MGI:1346091
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 product : fibulin 5 protein_id : NP_035942.1

name	Trip11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94393032 GeneID:109181 MGI:1924393
definition	codon_start : 1 product : thyroid hormone receptor interactor 11 isoform 3 protein_id : XP_001001171.1

name	Atxn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859736 CCDS:CCDS26115.1 GeneID:110616 MGI:1099442
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Machado-Joseph disease (spinocerebellar ataxia 3, olivopontocerebellar ataxia 3, autosomal dominant, ataxin 3) homolog product : ataxin 3 protein_id : NP_083981.1

name	LOC100040305 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263498 GeneID:100040305
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474613.1

name	LOC100040297 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263494 GeneID:100040297
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474596.1

name	Cpsf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8393762 CCDS:CCDS26116.1 GeneID:51786 MGI:1861601
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA] codon_start : 1 note : cleavage and polyadenylation specificity factor; cleavage and polyadenylation specific factor 2, 100kD subunit product : cleavage and polyadenylation specific factor 2 protein_id : NP_058552.1

name	Slc24a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26024351 CCDS:CCDS26117.1 GeneID:238384 MGI:2447362
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IC] GO_function : GO:0015297 - antiporter activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0008273 - calcium, potassium:sodium antiporter activity [Evidence ISS]; GO:0005432 - calcium:sodium antiporter activity [Evidence ISS]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : K-dependent Na/Ca exchanger NCKX4 product : solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 protein_id : NP_742164.1

name	Rin3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244002 CCDS:CCDS26118.1 GeneID:217835 MGI:2385708
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : Ras and Rab interactor 3 protein_id : NP_808288.1

name	LOC100040123 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263487 GeneID:100040123
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 128 ESTs, 9 Proteins product : similar to ribosomal protein S17 pseudo : _no_value transcript_id : XR_031537.1

clone name	MSMg01-355I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334H21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-472K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531I24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-185M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501I16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-412L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115N13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-536F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149E05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-468N24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-078P15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-093D07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-541K20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-523C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084N11
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-211G08.b	B6Ng01-211G08.g
ACC	GA029473	GA029474
length	1,168	776
definition	B6Ng01-211G08.b	B6Ng01-211G08.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(102,348,596 - 102,349,512)	(102,539,814 - 102,540,586)
sequence	gaattccaagctcatcatcagcttcaaggattttctagttaaccattgga acactggtggaggcttagctatgtcaaaaatcaatccttaaaggcactta taataaaacaatagtgaaagagagcacacagatccaaacaccagactaat gaggggatagggtttgagtatacgtgctatgggaatgccaaggttccagg aggcatagtttccttgaaactctttgccttgtgagtgcttccaggccttt taacctgtcaagcagacttcactggagtgggcgtagcaccttggctccca tttggaccacaacacctgtgtgctgaccctgaggaaacatgtcccaggag atttttaccttagggatgctgttttcatcttaatcacagatgattcttca tccccatctgacaatatttattatcccagtaaagcaaaaattttgcttgt gtggttctcttgttaaccacagccaattcttcagctccagctaaccagaa acacagattcttaattcaaaatattaaactggccccagtagagagtgttt aaggaactctcaaacttccctctgaaacttcacaagccagatctccatcg cctgcatctctctcagcactcatctttgaagtgctctttgctttgaacag tccactgagtactcaacagattttccagcccaagtccaaatgtcaccaca acattttcaaaacacatggtctggtctgtcacagcaataccccatggctt tgacccaatttttgttttagggtgtacattgtcatggtaaaacactatca ccagaaacaactgaaaaagaaaagtgtttattggattgcatagcctgtgt cacaattcatagaggggaagcagaggtgggaaactgaagcaggggaggaa tacggcttactggcttgctaatcctgggcttgctcattttgcttttgtaa tactacccaggaccacaagcccaggagtgccagtgtctattagtgatcca ggcccttcccacatcaatcatcaatcaagacagtatcctagaacccttgc ctataggccagtcttattggggagcatttttctctattactttctttttt ctagttagtcctaaccaagttacttctgatctccagccaggaagatgttt tccattcatagtgaatgt	gaattcctctttactttgtgtgtgcatcccaggtagaggatgctaaaaca ctttcctcttgatctatagccctagactcgtatatggatagattgtttaa ctaatatgtgcccttgtttaatttctagtgctgaccataagcaactgggg ggaggaaataatttatttcagattatatctattactccaggaggggaaat taagaaaataacttttgttgagaacttggaggcaggaaatggagcagagt ccatgtaaggatgtgtctagatgtgactgcccacattaatcattaatcaa gaaaatgcctcaaagaccggactccaagccagtctgatgtaggcagttcc tcaagtgacattcctcttctcagaggtatctaggtttgtaacaaattgac agaaccaaaccagcatagtgtgcatatacgtacaagatatatgtacctac tgctttcagaggtcttaaatatatatcggatattctgaagctataattat agatggttgtgagtcactctgtgggtgagaaccaaattctggtcctctag gagagtggcaaatactcataggcacaaaattacctctcaaggactggact gacctagaaagagatccatcattttcaaatttttctttaagacaaatgaa acacattttaatcttggctgctttgttgatgagtattcatttttatgtct atgtgccagtaataaatttttctttaagtcatctctccctcatatatata tatatatgtgtgtgtgtgtgtgagtg
quality values	Open. Hide. 41 16 28 29 58 54 31 15 47 62 62 62 39 26 54 47 47 62 47 41 56 62 62 62 38 39 47 62 62 32 39 25 22 19 28 16 8 6 8 9 11 13 12 24 20 45 50 62 62 54 62 62 59 59 62 59 62 59 54 49 54 59 62 62 62 62 62 59 62 54 54 62 62 62 59 59 32 28 34 34 28 28 27 27 50 51 62 62 54 59 62 54 49 42 62 62 59 54 54 59 62 59 59 62 62 62 62 62 62 59 56 62 62 56 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 51 49 54 62 59 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 59 62 62 62 59 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 59 62 62 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 49 59 50 38 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 54 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 43 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 59 59 62 37 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 56 54 56 56 56 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 52 62 62 62 54 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 54 49 54 46 58 54 58 54 58 49 58 54 58 58 58 58 51 54 54 52 48 54 58 58 52 42 58 54 58 58 58 58 58 46 58 47 54 58 52 58 54 54 58 58 58 58 54 46 38 45 52 54 58 54 58 58 54 58 58 58 58 58 58 58 52 58 49 50 39 52 47 51 49 40 41 51 58 58 50 51 41 39 52 47 39 54 50 49 49 49 35 58 51 50 51 50 46 47 53 58 46 27 58 46 51 40 50 31 58 50 46 54 50 50 36 36 46 32 53 32 52 52 33 37 58 58 41 37 15 51 58 44 37 35 40 52 53 53 58 39 58 41 47 58 36 50 51 52 50 39 30 42 52 29 47 50 50 41 42 35 49 58 58 39 50 51 58 37 52 51 50 30 42 20 58 35 20 29 33 54 54 54 29 46 23 54 54 19 33 19 54 46 17 54 26 37 39 42 35 16 12 8 26 29 38 42 33 16 51 54 54 46 52 37 40 52 42 45 45 40 42 54 37 30 49 30 31 35 31 35 41 38 40 38 44 49 51 37 21 33 54 54 46 29 28 30 25 53 33 31 49 49 19 30 40 18 15 32 34 25 28 29 29 25 35 32 53 24 34 39 36 29 26 23 52 33 32 40 33 40 30 22 32 24 51 46 24 31 40 23 31 32 21 28 9 51 31 31 51 11 40 51 27 28 30 30 45 30 23 31 7 10 30 46 23 35 29 22 31 38 29 33 22 27 25 14 21 42 19 24 16 32 42 31 22 22 30 23 34 36 28 34 33 34 31 29 46 11 32 32 27 37 23 41 21 33 11 48 48 29 32 31 44 48 48 19 37 18 8 6 18 24 25 14 16 30 46 31 26 19 25 18 12 20 11 20 13 16 19 29 44 18 18 32 14 21 8 31 31 29 24 16 24 35 31 10 9 9 15 10 20 26 27 22 34 35 32 29 29 19 18 25 7 24 29 10 14 34 39 22 23 20 23 24 18 13 21 27 23 32 32 34 23 15 30 30 14 25 22 26 7 9 7 4 4 10 27 20 17 11 9 5 24 6 43 10 22 19 34 13 27 26 9 9 5 6 19 13 15 10 6 27 23 18 10 18 8 6 6 27 34 14 9 7 11 15 24 40 34 8 5 5 5 4 6 8 7 15 5 5 15 30 15 4 3 47 40 34 21 7 8 6 20 6 17 15 9 8 6 10 7 7 9 3 8 6 4 8 6 14 11 15 15 15 9 19 4 11 19 22 10 10 12 16 6 6 9 12 6 24 9 10 7 4 7 5 8 4 21 23 5 4 4 14 15 6 9 4 4 7 10 6 6 16 15 3 2 3	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr12_102348596_102349512
seq2: B6Ng01-211G08.b_297_1217

seq1  TTTTAACCTGTCAAGCAGACTTCACTGGAGTGGGCGTAGCACCTTGGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACCTGTCAAGCAGACTTCACTGGAGTGGGCGTAGCACCTTGGCTC  50

seq1  CCATTTGGACCACAACACCTGTGTGCTGACCCTGAGGAAACATGTCCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGGACCACAACACCTGTGTGCTGACCCTGAGGAAACATGTCCCAG  100

seq1  GAGATTTTTACCTTAGGGATGCTGTTTTCATCTTAATCACAGATGATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTTTACCTTAGGGATGCTGTTTTCATCTTAATCACAGATGATTCT  150

seq1  TCATCCCCATCTGACAATATTTATTATCCCAGTAAAGCAAAAATTTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCCATCTGACAATATTTATTATCCCAGTAAAGCAAAAATTTTGCT  200

seq1  TGTGTGGTTCTCTTGTTAACCACAGCCAATTCTTCAGCTCCAGCTAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGTTCTCTTGTTAACCACAGCCAATTCTTCAGCTCCAGCTAACCA  250

seq1  GAAACACAGATTCTTAATTCAAAATATTAAACTGGCCCCAGTAGAGAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACAGATTCTTAATTCAAAATATTAAACTGGCCCCAGTAGAGAGTG  300

seq1  TTTAAGGAACTCTCAAACTTCCCTCTGAAACTTCACAAGCCAGATCTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGAACTCTCAAACTTCCCTCTGAAACTTCACAAGCCAGATCTCCA  350

seq1  TCGCCTGCATCTCTCTCAGCACTCATCTTTGAAGTGCTCTTTGCTTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCTGCATCTCTCTCAGCACTCATCTTTGAAGTGCTCTTTGCTTTGAA  400

seq1  CAGTCCACTGAGTACTCAACAGATTTTCCAGCCCAAGTCCAAATGTCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCACTGAGTACTCAACAGATTTTCCAGCCCAAGTCCAAATGTCACC  450

seq1  ACAACATTTTCAAAACACATGGTCTGGTCTGTCACAGCAATACCCCATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATTTTCAAAACACATGGTCTGGTCTGTCACAGCAATACCCCATGG  500

seq1  CTTTGACCCAATTTTTGTTTTAGGGTGTACATTGTCATGGTAAAACACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACCCAATTTTTGTTTTAGGGTGTACATTGTCATGGTAAAACACTA  550

seq1  TCACCAGAAACAACTGAAAAAGAAAAGTGTTTATTTGGATTGCATAGCCT  600
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCACCAGAAACAACTGAAAAAGAAAAGTGTTTA-TTGGATTGCATAGCCT  599

seq1  GTGTCACAATTCATAGA-GGGAAGCAGAGGT-GGAAACTGAAGCAGGGGA  648
      ||||||||||||||||| ||||||||||||| ||||||||||||||||||
seq2  GTGTCACAATTCATAGAGGGGAAGCAGAGGTGGGAAACTGAAGCAGGGGA  649

seq1  GGAATACGGCTTACTGGCTTGCTAATCCT-GGCTTGCTCAATTTGCTTTT  697
      ||||||||||||||||||||||||||||| |||||||||| |||||||||
seq2  GGAATACGGCTTACTGGCTTGCTAATCCTGGGCTTGCTCATTTTGCTTTT  699

seq1  GT-ATACTACCCAGGACCACAAGCCCAGGAGTGCCAGTGTCTA-TAGTGA  745
      || |||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTAATACTACCCAGGACCACAAGCCCAGGAGTGCCAGTGTCTATTAGTGA  749

seq1  TCCAGGCCC-TCCCACATCAATCATCAATCAAGACAGTATCCCTAGAA-C  793
      ||||||||| |||||||||||||||||||||||||||||| ||||||| |
seq2  TCCAGGCCCTTCCCACATCAATCATCAATCAAGACAGTAT-CCTAGAACC  798

seq1  CTTGCCTATAGGCCAGTCTTAT--GGGAGCA-TTTTCTCTATTAACTTTT  840
      ||||||||||||||||||||||  ||||||| ||||||||||||   |||
seq2  CTTGCCTATAGGCCAGTCTTATTGGGGAGCATTTTTCTCTATTA--CTTT  846

seq1  CCTTTTTCTAGTTAGT-CTAGCACAGTTTACTTCCTGATTCTCCAG-CAG  888
      | |||||||||||||| ||| | ||  |||||| |||| ||||||| |||
seq2  CTTTTTTCTAGTTAGTCCTAAC-CAAGTTACTT-CTGA-TCTCCAGCCAG  893

seq1  GAGAGAATGTTTCAATTCATAGTGAATGT  917
      || |||   |||| |||||||||||||||
seq2  GA-AGATGTTTTCCATTCATAGTGAATGT  921

seq1: chr12_102539814_102540586
seq2: B6Ng01-211G08.g_68_843 (reverse)

seq1  CACACACACACACACACACATATATATATATATATGAGGGAGAGATGACT  50
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCACACACACACACACATATATATATATATATGAGGGAGAGATGACT  50

seq1  T-AAGAAAA--TTATTACTGGCACATAGACATAAAAATGAATACTCATCA  97
      | |||||||  |||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAAATTTATTACTGGCACATAGACATAAAAATGAATACTCATCA  100

seq1  ACAAAGCAGCCAAGATTAAAATGTGTTTCATTTGTCTTAAAGAAAAATTT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCAGCCAAGATTAAAATGTGTTTCATTTGTCTTAAAGAAAAATTT  150

seq1  GAAAATGATGGATCTCTTTCTAGGTCAGTCCAGTCCTTGAGAGGTAATTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGATGGATCTCTTTCTAGGTCAGTCCAGTCCTTGAGAGGTAATTT  200

seq1  TGTGCCTATGAGTATTTGCCACTCTCCTAGAGGACCAGAATTTGGTTCTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTATGAGTATTTGCCACTCTCCTAGAGGACCAGAATTTGGTTCTC  250

seq1  ACCCACAGAGTGACTCACAACCATCTATAATTATAGCTTCAGAATATCCG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAGAGTGACTCACAACCATCTATAATTATAGCTTCAGAATATCCG  300

seq1  ATATATATTTAAGACCTCTGAAAGCAGTAGGTACATATATCTTGTACGTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATTTAAGACCTCTGAAAGCAGTAGGTACATATATCTTGTACGTA  350

seq1  TATGCACACTATGCTGGTTTGGTTCTGTCAATTTGTTACAAACCTAGATA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACACTATGCTGGTTTGGTTCTGTCAATTTGTTACAAACCTAGATA  400

seq1  CCTCTGAGAAGAGGAATGTCACTTGAGGAACTGCCTACATCAGACTGGCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAGAAGAGGAATGTCACTTGAGGAACTGCCTACATCAGACTGGCT  450

seq1  TGGAGTCCGGTCTTTGAGGCATTTTCTTGATTAATGATTAATGTGGGCAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCCGGTCTTTGAGGCATTTTCTTGATTAATGATTAATGTGGGCAG  500

seq1  TCACATCTAGACACATCCTTACATGGACTCTGCTCCATTTCCTGCCTCCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCTAGACACATCCTTACATGGACTCTGCTCCATTTCCTGCCTCCA  550

seq1  AGTTCTCAACAAAAGTTATTTTCTTAATTTCCCCTCCTGGAGTAATAGAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCAACAAAAGTTATTTTCTTAATTTCCCCTCCTGGAGTAATAGAT  600

seq1  ATAATCTGAAATAAATTATTTCCTCCCCCCAGTTGCTTATGGTCAGCACT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTGAAATAAATTATTTCCTCCCCCCAGTTGCTTATGGTCAGCACT  650

seq1  AGAAATTAAACAAGGGCACATATTAGTTAAACAATCTATCCATATACGAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTAAACAAGGGCACATATTAGTTAAACAATCTATCCATATACGAG  700

seq1  TCTAGGGCTATAGATCAAGAGGAAAGTGTTTTAGCATCCTCTACCTGGGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGGCTATAGATCAAGAGGAAAGTGTTTTAGCATCCTCTACCTGGGA  750

seq1  TGCACACACAAAGTAAAGAGGAATTC  773
      ||||||||||||||||||||||||||
seq2  TGCACACACAAAGTAAAGAGGAATTC  776

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information