BAC Information

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BAC

Clone NameB6Ng01-211G20
Chromosome12 (Build37)
Map Location 120,849,900 - 120,850,819
singlet/doubletsinglet
Overlap geneLOC668632
Upstream geneEG668615, LOC620665, Sp8, Abcb5, Itgb8, EG627557, LOC100043011, 4732474O15Rik
Downstream geneLOC668633, Gm528, LOC100043017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211G20.bB6Ng01-211G20.g
ACCGA029497GA029498
length1,186853
definitionB6Ng01-211G20.b B6Ng01-211G20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaaacacctgaaaaaatg
ttcagcatccttaattatcagggatatacaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattgaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactgctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcattctggcagttcctca
gaaaattggacctagtactaccggaggatcctgcaatacctctcatgcgc
atatatccagaagatgttccaactagtaagaaaaaacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
ccccgcaacagaggaatggatacaaaaaaacgtggtacatttatacaatg
gagtactactcagctattaaaagaatgaatttatgaaattcctagacaaa
tggttggacctggagggcattatcctaagtgaggtaacccaatcacaaaa
caactcaaatgatatgtactcactaataagtggatattagcccagaaact
tagaacacccaagatataagttacaatttgcaatacactgaaattcaaga
agacagaagaccaaagtgtggacactttgccccttcttagaactgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgtgacaaa
aggatggaccatctagagactgccatatccagggatccaccccataatca
gcctccaaacgctgacaccattgcatacactagcaagattttgctgacag
gaccctgatatagctgtctcttgtgagactacgccagggcctagcaaaca
cataagtggatgctcacagtcagctattggatgtatcacagggccctcaa
tgggaggagctagagaaagtaccaaggagctaaagggatctgcaacccca
taagtggaacaacattatgaactaaccagtacccagggagttctgactct
agttgcatatgtatcaaaagattgccctagttggccatccactaggaaag
aggaggcccattggacattacaacctttaatatgtgcccaggtacagggg
taatgtctaggggcccaaagttgggaattgggttga
gaattcccccttttcgctggtgagggcttggtggaactgtggggagaaac
agttggggctaagggtcctttggaaacagcatcttcttgcagggaagcaa
ctctcttggcaggctgctctgataattccctttcttttctcttttctttt
cttttcttttcttttcttttcttttcttttcttttcttttcttttctttt
cttttctcttctcttctcttctcttctcttctcttctcttctcttctttt
ctttctctctctctctctctctctctctctttctttctttctttctttct
ttctttctttctttctttctttctttctttctttctttttctttctctct
ctctttctttcttttgctttcccaaggggctgagcacagtccttaagcct
tggggcagcacagcgggtgttcctgagtcctcactcttgaaagaggcgct
ctgttttgggaagcagcttccttggagagcttccatttaggttgttgttg
cttcagcttccagccctcttattccagctttccatcagactgactgcttc
ctggacctggcagacacttgacgttggacagaagttcactgacagctagc
cttagagatgcttctgagtgcttcacttctgagtgctctgaatgttctgt
ctcgacagacactgctgcttgcttgcttgccgcgcttcttggtggctgac
agtactgttctcagacttagtgacctgatcttcagtcagttatgtatgta
gctgctgccagttcctgcatgcgtaggaatagatagaattctgactgcga
taagaacgtccacatgtgagtgtgaggtagagcaaacacagatggtgaag
cac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_120849900_120850819
seq2: B6Ng01-211G20.g_69_921 (reverse)

seq1  GTGCTTTCACCCCATTCTGTGTTTGCTTCTACCCTCACACTCACAATGTG  50
      |||| ||||||    ||||||||||| |||| |||||||||||| |||||
seq2  GTGC-TTCACC---ATCTGTGTTTGC-TCTA-CCTCACACTCAC-ATGTG  43

seq1  GACGGTTTCTTTATCGCCAAGTTCAAGAAAATTTCCTATTCTATTCCCTA  100
      ||||  ||| |||||||  |||   ||||    | ||| |||||| ||||
seq2  GACG--TTC-TTATCGC--AGT--CAGAA----TTCTA-TCTATT-CCTA  80

seq1  ACCGCATGCAGGAAACTTGGCAGCAGCTACCCCTACATAACCTGACCTGA  150
        ||||||||||||   ||||||||||||  | ||||||| |||| ||||
seq2  --CGCATGCAGGAA--CTGGCAGCAGCTA--CATACATAA-CTGA-CTGA  122

seq1  AGGATCAGGTCACCCTAAAGTCTGAGAACAGTACTGTCAGCCCACCAAGA  200
      | |||||||||||    ||||||||||||||||||||||| |||||||||
seq2  A-GATCAGGTCAC---TAAGTCTGAGAACAGTACTGTCAG-CCACCAAGA  167

seq1  AAGCCCGCGGCAAAAGCAAAAAGCAAAGCAGCAGTTGTCTGTCGAGACAG  250
      |    ||||||  ||||   |||| ||||||||| |||||||||||||||
seq2  A---GCGCGGC--AAGC---AAGC-AAGCAGCAG-TGTCTGTCGAGACAG  207

seq1  AAACATTTCAAGAAGCACTTCAGAAGGTGAAGCACTTCAGAAGGCATCTC  300
       |||| ||||   ||||| |||||| ||||||||| |||||| |||||||
seq2  -AACA-TTCA--GAGCAC-TCAGAA-GTGAAGCAC-TCAGAA-GCATCTC  249

seq1  TAAAGGGCTAGGCTTGTTCAGTGAACCTTCTGTCCCAAACGTCCAAGTGT  350
      |||  ||||| |||   |||||||| |||||||||  ||||| |||||||
seq2  TAA--GGCTA-GCT--GTCAGTGAA-CTTCTGTCC--AACGT-CAAGTGT  290

seq1  CTGCCAGGTCCCAGGAAAGCAGTCAGTCTGATGGAAAAGCTGGAAATAAA  400
      ||||||||| ||||| |||||||||||||||||| ||||||||||   ||
seq2  CTGCCAGGT-CCAGG-AAGCAGTCAGTCTGATGG-AAAGCTGGAA--TAA  335

seq1  GAGGGCTGGGAAGCTGAAGCAACAACAACCTAAATGGAAGCTCTCCAAGG  450
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCT-GGAAGCTGAAGCAACAACAACCTAAATGGAAGCTCTCCAAGG  384

seq1  AAGCTGCTTTCCCAAAACAGAGCGCCTCTTTCAAGAGTGAGGACTCAGGA  500
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGC-TTCCCAAAACAGAGCGCCTCTTTCAAGAGTGAGGACTCAGGA  433

seq1  ACACCCGCTGTGCTGCCCCAAGGCTTAAGGACTGTGCTCAGCCCCTTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCGCTGTGCTGCCCCAAGGCTTAAGGACTGTGCTCAGCCCCTTGGG  483

seq1  AAAGCAAAAGAAAGAAAGAGAGAGAGAAAGAAAAAGAAAGAAAGAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAAGAAAGAAAGAGAGAGAGAAAGAAAAAGAAAGAAAGAAAGAA  533

seq1  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAG  583

seq1  AGAGAGAGAGAGAGAGAAAGAAAAGAAGAGAAGAGAAGAGAAGAGAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAAAGAAAAGAAGAGAAGAGAAGAGAAGAGAAGAG  633

seq1  AAGAGAAGAGAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGAGAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAG  683

seq1  AAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAAAGAAAGGGAATTATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAGAAAAGAAAGGGAATTATC  733

seq1  AGAGCAGCCTGCCAAGAGAGTTGCTTCCCTGCAAGAAGATGCTGTTTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGCCTGCCAAGAGAGTTGCTTCCCTGCAAGAAGATGCTGTTTCCA  783

seq1  AAGGACCCTTAGCCCCAACTGTTTCTCCCCACAGTTCCACCAAGCCCTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCCTTAGCCCCAACTGTTTCTCCCCACAGTTCCACCAAGCCCTCA  833

seq1  CCAGCGAAAAGGGGGAATTC  920
      ||||||||||||||||||||
seq2  CCAGCGAAAAGGGGGAATTC  853