BAC Information

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BAC

Clone NameB6Ng01-211N06
Chromosome12 (Build37)
Map Location 89,347,699 - 89,348,323
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem63c, Ngb, Pomt2, Gstz1, EG625237, Tmed8, Gm263, 4933437F05Rik, AI413782, Ahsa1, Thsd3, Sptlc2, LOC667287, Nrp, 1810035L17Rik, Snw1, LOC100042747, EG544883, EG666806, EG633031, Oog1, LOC100042776, LOC100042778, LOC100042239, LOC100042786, BB287469, LOC100038964, LOC673658, LOC100038992, LOC100038982, LOC674027, LOC100039042, LOC100039052, LOC100039076, LOC100039087, LOC100039100, LOC100039191, LOC100039203, LOC627873, LOC100039162, LOC627881, LOC100039129, LOC636517, LOC544884, LOC100039226, LOC432715, EG667350
Downstream geneLOC546543, EG667388, LOC627971, LOC667395, LOC100039315, EG638008, EG666862, EG435337, LOC100039154, LOC633093, LOC667440, LOC100039383, EG266459, LOC667475, LOC620915, LOC435314, Adck1, LOC100039261, EG666915, Nrxn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211N06.bB6Ng01-211N06.g
ACCGA029782GA029783
length1,203640
definitionB6Ng01-211N06.b B6Ng01-211N06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtgtttaaaattttgatatggatggacccatccttcaactggg
ggctgtgcatatatactggagttgatctctacagtttctacctccccttt
gttgggtatttcagctaatgtcaacccaggtgggtcctggaaacctcttg
cttccttgacatcttggacttcctagtgactaccaccaattcctcaccct
caactgccacacatttatcttcatttttctggccctcatcttctttccta
tctctccccatacttgatctggacccactcctttttttcctcctccttct
ctatccctgccaattccctcccaccctctacatcctgtgattattttgtt
cccctttctaattagtattgaagcatccacactttggccttccttcttgt
taagcttcatatggtctgtggtttatatcatgggtattctgagattttga
gctagtatcctcttatcagtgaatacatgccatgtgtgtcctttggtgcc
agggttacctcagtcagaatgatattttctagtttgatccatttggctgt
aaatttcatgaagttatttttttaatagctgagtagtactctattgtgta
aatgtactacattttctgtattattcttccactgaatgacatctgggttg
tttctagtttctaagtattataaataacactgatatgaacatagtgaatc
atgtgtctttgtaatatgttgggggaacttttgggtatatgcctgcccaa
tagtgttattgctagagttcaggcagaactatttccaatcttctgagtga
atgcgacactgttttccaaagttgttttaccagctcacaatcccctcagt
aatgaagtgttctcctttctctacatcctcacattcatctgttgtcacct
gagtttttaatctttgccattctgatttgtgtgaggtagaatatcacggt
tattttaattacctgttccctgatgactatgctgtcgaactaccttggat
gcttcttcagccattttagattcctcagttgagagtcttgtttagcttct
gtaccccattttaatagggtatttgttcttctggagtctactcctgagtc
ttccatatgatccagcctgcattgatgtaaggaactgtaagaatcattca
tctgatggcctcaatttgcgatggacggatctttgactcttacccatgag
cct
gaattcatcttccatagaaatgagctttctaatttgcatgtgtgtgtgtg
tgcatgtgtatgtgtgtgtgtgacacagagagacacaaagacagagacag
acatagagagaataataaaaagaataacaggcaatgaatttgggaggggg
tagaaagagggggtacattggacaggttggaagggtaggctgagaatgtg
aagagaaaacttataattttgggtcttatagcattatggtatctaagctc
aagaaattcagggctgaagaatagacccaagcggatccaggcacagccag
atccaccctgtagctaagaatatccggacataaaagataaaaaagaaagt
gcaaaaactagccagggctatcaggaccaaatggccatctggcaggatgg
cgcctcccgggtggcacctccctatagcccaccataaatcatacactgac
caggtgtcctgctgacctcgagaagtccaagcctttgtgtctccctacac
cttaactagcacgtactgccctgttgatttgtaatcacctcgccaatatt
taaaaaagccaatcatgtgtaaccgcgcatataccttcgactccctccct
ttttggtttgtggatttttgccctttataaacctttataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_89347699_89348323
seq2: B6Ng01-211N06.g_66_705

seq1  GAATTCATCTTCCATAGAAATGAGC-TTCTAATTTGCA--TGTGTGTGTG  47
      ||||||||||||||||||||||||| ||||||||||||  ||||||||||
seq2  GAATTCATCTTCCATAGAAATGAGCTTTCTAATTTGCATGTGTGTGTGTG  50

seq1  TGCATGTGTATGTGTGTGTGTGACACAGAGAGACACAAAGACAGAGACAG  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGTATGTGTGTGTGTGACACAGAGAGACACAAAGACAGAGACAG  100

seq1  ACATAGAGAGAATAATAAAAAGAATAACAGGCAATGAATTTGGGATGGGG  147
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACATAGAGAGAATAATAAAAAGAATAACAGGCAATGAATTTGGGAGGGGG  150

seq1  TAGAAAGAGGGGGTACATTGGACAGGTTAAAAGGGTAGGCTGAGAATGTG  197
      ||||||||||||||||||||||||||||  ||||||||||||||||||||
seq2  TAGAAAGAGGGGGTACATTGGACAGGTTGGAAGGGTAGGCTGAGAATGTG  200

seq1  AAGAGAAAACTTATAATTTTGGGTCTTATAGCATTGTGGTATCTAAGCTC  247
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAGAGAAAACTTATAATTTTGGGTCTTATAGCATTATGGTATCTAAGCTC  250

seq1  AAGAAATTCAGGGCTGAAGAATAGACCCAAGCAGATCCAGGCACAGCCAG  297
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAGAAATTCAGGGCTGAAGAATAGACCCAAGCGGATCCAGGCACAGCCAG  300

seq1  ATCCACCCTGTAGCTAAGAATGTCTGGCCATAAAAGATAAAAAAGAAAGT  347
      ||||||||||||||||||||| || || ||||||||||||||||||||||
seq2  ATCCACCCTGTAGCTAAGAATATCCGGACATAAAAGATAAAAAAGAAAGT  350

seq1  GCAGGAACTAGCCAGGGCTATCAGGACCAAATGGCCATCTGGCAGGATGG  397
      |||  |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAACTAGCCAGGGCTATCAGGACCAAATGGCCATCTGGCAGGATGG  400

seq1  CGCCTCCTGGGTGGCACCTCCCTATAGCCCACCATAAATCATACACTGAC  447
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTCCCGGGTGGCACCTCCCTATAGCCCACCATAAATCATACACTGAC  450

seq1  CAGGTGTTCTGCTGACCTCGAGAAGTCCAAGCCTTTGTGCCCCCCTACAC  497
      ||||||| ||||||||||||||||||||||||||||||| | ||||||||
seq2  CAGGTGTCCTGCTGACCTCGAGAAGTCCAAGCCTTTGTGTCTCCCTACAC  500

seq1  CTTAACTAGCACGTACTGCCCTGTTAATTTGTAATCACCTCGCCAACATT  547
      ||||||||||||||||||||||||| |||||||||||||||||||| |||
seq2  CTTAACTAGCACGTACTGCCCTGTTGATTTGTAATCACCTCGCCAATATT  550

seq1  TAAATAAGCCAATCATGTGTAACCGCACAAATTCTTTCAGCTCCCTCCCT  597
      |||| ||||||||||||||||||||| || || | |||  ||||||||||
seq2  TAAAAAAGCCAATCATGTGTAACCGCGCATATACCTTCGACTCCCTCCCT  600

seq1  TTTTGGTTTGTGG-TTTTTG-CCTTTATAA----------  625
      ||||||||||||| |||||| |||||||||          
seq2  TTTTGGTTTGTGGATTTTTGCCCTTTATAAACCTTTATAA  640