BAC Information

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BAC

Clone NameB6Ng01-211P16
Chromosome12 (Build37)
Map Location 7,532,824 - 7,700,645
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668380
Downstream geneEG668388, Apob, 1110057K04Rik, Gdf7, Hs1bp3, BC106175, Rhob, Slc7a15, LOC100043154, Pum2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211P16.bB6Ng01-211P16.g
ACCGA029893GA029894
length758733
definitionB6Ng01-211P16.b B6Ng01-211P16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,532,824 - 7,533,573)(7,699,913 - 7,700,645)
sequence
gaattcagcagtgaatataacatcttcattttgaattgctctgacaaaat
atgtgacagaaataaagggagagggatttattttgctggtgttttttcag
aggtcctagcaaattcagatagcagggtggtcacagtagaaaagagtaat
tcacacagtggctactaggagagagggagggagggggacagggaaaggga
gaggaacaaggaagaggaagagcatgggcaaagggagagggataaagagg
atggacagcagacaaggatagggagagaaagatggagagagacagaggga
caggggagaaggactgggacagggagaatatgctatgggcttcagcctct
ccagtccttttatctcatccaagtcttcagcctgtgaatgaccatctata
atggctattccttgttgccaacttgactacaatccagaattggagggcac
acctgtgatctagatcttgaggctggaagacacaagtttctgacctggta
gcatggagatcttgaggcacagtggccttgaaaagcttaggctcagacaa
ggtagtacatgcctttactcccaggagactgaggcaaggagatatctgag
ttcaaggtcacccctgggacatcacaagtcccagattccaggcatgtggg
tacaaaacctttaatctgagccatacccttctgctggatgcctaaataag
gacattggaagaaggaagattcattcttttatgacttgtttgcactttaa
tttgcaca

gaattctttcctcatacttactagagtcatagatcagggcttgagaccaa
ataacagctaaaagcattattatcttttagaatttgtcctctctgggtac
caactgtacctgaagacctttcacattgcagtgttctggacagtgtgggt
ggaatttaagtattgatccaacaccatcctaatctcagcagaacttttct
ctgtctcatctctctctatctctctagggtgattttataaatggacgatg
gttaggccatgcacaaaaatagaactctgattcatgatctagggaatgag
tctaagaagacaaaccctaacatctatagcaatcaggtcttaaaagtcag
gacatagtcaataaccatttccagtttggaagaaattagagaaagtgaaa
tttcaccctcctactgaatagtgcacttccagcttctcccagactgacac
aatccaatggaggcacgtgagaacctggacattttattattataaaattt
ttatctttccctgcatgcttttgagagatcatgaagggttaagttatggt
ggcttagtttctttattaagtgatatttgtttatcctcatttgagtggtt
tttactttcacacacactctgtatttttctttaggtgtgaatatgtacag
aaaagtatatgccataaaaggaaaaccactcaaaccctactctatcccgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_7532824_7533573
seq2: B6Ng01-211P16.b_48_805

seq1  GAATTCAGCAGTGAATATAACATCTTCATTTTGAATTGCTCTGACAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGTGAATATAACATCTTCATTTTGAATTGCTCTGACAAAAT  50

seq1  ATGTGACAGAAATAAAGGGAGAGGGATTTATTTTGCTGGTGTTTTTTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACAGAAATAAAGGGAGAGGGATTTATTTTGCTGGTGTTTTTTCAG  100

seq1  AGGTCCTAGCAAATTCAGATAGCAGGGTGGTCACAGTAGAAAAGAGTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTAGCAAATTCAGATAGCAGGGTGGTCACAGTAGAAAAGAGTAAT  150

seq1  TCACACAGTGGCTACTAGGAGAGAGGGAGGGAGGGGGACAGGGAAAGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAGTGGCTACTAGGAGAGAGGGAGGGAGGGGGACAGGGAAAGGGA  200

seq1  GAGGAACAAGGAAGAGGAAGAGCATGGGCAAAGGGAGAGGGATAAAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACAAGGAAGAGGAAGAGCATGGGCAAAGGGAGAGGGATAAAGAGG  250

seq1  ATGGACAGCAGACAAGGATAGGGAGAGAAAGATGGAGAGAGACAGAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACAGCAGACAAGGATAGGGAGAGAAAGATGGAGAGAGACAGAGGGA  300

seq1  CAGGGGAGAAGGACTGGGACAGGGAGAATATGCTATGGGCTTCAGCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAGAAGGACTGGGACAGGGAGAATATGCTATGGGCTTCAGCCTCT  350

seq1  CCAGTCCTTTTATCTCATCCAAGTCTTCAGCCTGTGAATGACCATCTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCCTTTTATCTCATCCAAGTCTTCAGCCTGTGAATGACCATCTATA  400

seq1  ATGGCTATTCCTTGTTGCCAACTTGACTACAATCCAGAATTGGAGGGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTATTCCTTGTTGCCAACTTGACTACAATCCAGAATTGGAGGGCAC  450

seq1  ACCTGTGATCTAGATCTTGAGGCTGGAAGACACAAGTTTCTGACCTGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGATCTAGATCTTGAGGCTGGAAGACACAAGTTTCTGACCTGGTA  500

seq1  GCATGGAGATCTTGAGGCACAGTGGCCTTGAAAAGCTTAGGCTCAGACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGAGATCTTGAGGCACAGTGGCCTTGAAAAGCTTAGGCTCAGACAA  550

seq1  GGTAGTACATGCCTTTACTCCCAGGAGACTGAGGCAAGGAGATATCTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTACATGCCTTTACTCCCAGGAGACTGAGGCAAGGAGATATCTGAG  600

seq1  TTCAAGGTCA-CCCTGGGACATCACAAGTCCCAGA-TCCAGGCATGT-GG  647
      |||||||||| |||||||||||||||||||||||| ||||||||||| ||
seq2  TTCAAGGTCACCCCTGGGACATCACAAGTCCCAGATTCCAGGCATGTGGG  650

seq1  TAC-AAACCTTTAATCTGAGCCATA-CCTTCTGCTGGATGCCTAAATAAG  695
      ||| ||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TACAAAACCTTTAATCTGAGCCATACCCTTCTGCTGGATGCCTAAATAAG  700

seq1  GACATTGGAAGAAGGAAGATTCACTCTTTTATGAC-TGTTTGCACTT--A  742
      ||||||||||||||||||||||| ||||||||||| |||||||||||  |
seq2  GACATTGGAAGAAGGAAGATTCATTCTTTTATGACTTGTTTGCACTTTAA  750

seq1  ATTGCACA  750
       |||||||
seq2  TTTGCACA  758


seq1: chr12_7699913_7700645
seq2: B6Ng01-211P16.g_63_795 (reverse)

seq1  CACACACACACACACACACACACACACACACACACGGGATAGAGTAGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACGGGATAGAGTAGGGT  50

seq1  TTGAGTGGTTTTCCTTTTATGGCATATACTTTTCTGTACATATTCACACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGGTTTTCCTTTTATGGCATATACTTTTCTGTACATATTCACACC  100

seq1  TAAAGAAAAATACAGAGTGTGTGTGAAAGTAAAAACCACTCAAATGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAAATACAGAGTGTGTGTGAAAGTAAAAACCACTCAAATGAGGA  150

seq1  TAAACAAATATCACTTAATAAAGAAACTAAGCCACCATAACTTAACCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAATATCACTTAATAAAGAAACTAAGCCACCATAACTTAACCCTT  200

seq1  CATGATCTCTCAAAAGCATGCAGGGAAAGATAAAAATTTTATAATAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATCTCTCAAAAGCATGCAGGGAAAGATAAAAATTTTATAATAATAA  250

seq1  AATGTCCAGGTTCTCACGTGCCTCCATTGGATTGTGTCAGTCTGGGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCCAGGTTCTCACGTGCCTCCATTGGATTGTGTCAGTCTGGGAGAA  300

seq1  GCTGGAAGTGCACTATTCAGTAGGAGGGTGAAATTTCACTTTCTCTAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAGTGCACTATTCAGTAGGAGGGTGAAATTTCACTTTCTCTAATT  350

seq1  TCTTCCAAACTGGAAATGGTTATTGACTATGTCCTGACTTTTAAGACCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAAACTGGAAATGGTTATTGACTATGTCCTGACTTTTAAGACCTG  400

seq1  ATTGCTATAGATGTTAGGGTTTGTCTTCTTAGACTCATTCCCTAGATCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTATAGATGTTAGGGTTTGTCTTCTTAGACTCATTCCCTAGATCAT  450

seq1  GAATCAGAGTTCTATTTTTGTGCATGGCCTAACCATCGTCCATTTATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAGAGTTCTATTTTTGTGCATGGCCTAACCATCGTCCATTTATAAA  500

seq1  ATCACCCTAGAGAGATAGAGAGAGATGAGACAGAGAAAAGTTCTGCTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCCTAGAGAGATAGAGAGAGATGAGACAGAGAAAAGTTCTGCTGAG  550

seq1  ATTAGGATGGTGTTGGATCAATACTTAAATTCCACCCACACTGTCCAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGATGGTGTTGGATCAATACTTAAATTCCACCCACACTGTCCAGAA  600

seq1  CACTGCAATGTGAAAGGTCTTCAGGTACAGTTGGTACCCAGAGAGGACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAATGTGAAAGGTCTTCAGGTACAGTTGGTACCCAGAGAGGACAA  650

seq1  ATTCTAAAAGATAATAATGCTTTTAGCTGTTATTTGGTCTCAAGCCCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAAAGATAATAATGCTTTTAGCTGTTATTTGGTCTCAAGCCCTGA  700

seq1  TCTATGACTCTAGTAAGTATGAGGAAAGAATTC  733
      |||||||||||||||||||||||||||||||||
seq2  TCTATGACTCTAGTAAGTATGAGGAAAGAATTC  733


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