BAC Information

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BAC

Clone NameB6Ng01-212A24
Chromosome12 (Build37)
Map Location 102,510,812 - 102,612,057
singlet/doubletdoublet
Overlap genenone
Upstream geneTtc7b, Rps6ka5, LOC100040123, 9030617O03Rik, EG667148, Gpr68, 0610010D24Rik, LOC100040184, Smek1, 4930463M05Rik, Mylf-ps
Downstream gene4932415G16Rik, Mtac2d1, Fbln5, Trip11, Atxn3, LOC100040305, LOC100040297, Cpsf2, Slc24a4, Rin3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212A24.bB6Ng01-212A24.g
ACCGA029957GA029958
length1,107242
definitionB6Ng01-212A24.b B6Ng01-212A24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,510,812 - 102,511,541)(102,611,816 - 102,612,057)
sequence
gaattcctgtttggggcccaaatgaaatgggaaaatggataaaaagaaaa
ctagctctagcatttattgcccagtctctctgtgttgagaaagttcaggg
ttaattgcaatcctgagtgaaacagtctgaaaggatggatgaaccaaggt
catttgggattagcggtcctttttgaagctgtttcagaagcactagcggt
cctttttgaagctgtttcagaagcacatctaacagtatccgtttgaggca
ggatctcatagggagatggaacagcagagcaggtctcggcatctcaccat
ccttgaggctgaatcctgtcagggctgtattattggttgtgttttttttt
aacagaaagtttttaaaggtaatatatatttttatattaacataatgtat
ggaatgtgtatagatcagttcaaaataattttttgttcctcgtttgagga
ggtgaagacaattcttcatgagttaatttgaacatataaccaaactaata
taaatctccaactcatgctatatgaaaggatcacattacaaatcttgaga
agtctgtaccaacaagactattggctatgcttagctgaagttctcgctag
agacagtttatgtctcagccagttcaggactgtttccatgtagagggatc
agcaaatcatgttacctgttttgtttggtcttcttgatttcttacttctt
ctctgaagctaagatcttcagtgagtcttcctctatcaaatctgatcctt
agtacattgctaggagtccaaagcctttttttttctttcctgttagcata
taaacagagcctctctctcaacatagcttgccttccagcagttagaagtc
atcaaaaaatacagactgctccaatttagcaggccactttttatttagat
ctgcttcattttgacttctgtcacagacaatttgtaataccattataacc
atcaaacttataccacttaattttgataattaaaacaatttgaaataagt
actattatttattgagacagagtttctctttgtagcccaagttgaattgg
gatctgtctataatagctgacctcaaattgcatcctactggtcattgctt
tttctcc
cagttttaattcttgatggtctgatatgccggctctttgccagcaggttc
aggcaagaagagagaggtccaggtcccacccgggtctctctggggctgag
cagaatggtgagtgtcgatgggctaaaagaaacacaatgagctgggagtc
ttgttgaagcaggaactcagttttatggcatcaacctctcgcttgtataa
gttcagaacacagggagggggatttttggtggggtaagatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_102510812_102511541
seq2: B6Ng01-212A24.b_419_1142

seq1  ATATTAACATAATGTATGGAATGTGTATAGATCAGTTCAAAATAATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAACATAATGTATGGAATGTGTATAGATCAGTTCAAAATAATTTTT  50

seq1  TGTTCCTCGTTTGAGGAGGTGAAGACAATTCTTCATGAGTTAATTTGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTCGTTTGAGGAGGTGAAGACAATTCTTCATGAGTTAATTTGAAC  100

seq1  ATATAACCAAACTAATATAAATCTCCAACTCATGCTATATGAAAGGATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACCAAACTAATATAAATCTCCAACTCATGCTATATGAAAGGATCA  150

seq1  CATTACAAATCTTGAGAAGTCTGTACCAACAAGACTATTGGCTATGCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAAATCTTGAGAAGTCTGTACCAACAAGACTATTGGCTATGCTTA  200

seq1  GCTGAAGTTCTCGCTAGAGACAGTTTATGTCTCAGCCAGTTCAGGACTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGTTCTCGCTAGAGACAGTTTATGTCTCAGCCAGTTCAGGACTGT  250

seq1  TTCCATGTAGAGGGATCAGCAAATCATGTTACCTGTTTTGTTTGGTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGTAGAGGGATCAGCAAATCATGTTACCTGTTTTGTTTGGTCTTC  300

seq1  TTGATTTCTTACTTCTTCTCTGAAGCTAAGATCTTCAGTGAGTCTTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTCTTACTTCTTCTCTGAAGCTAAGATCTTCAGTGAGTCTTCCTC  350

seq1  TATCAAATCTGATCCTTAGTACATTGCTAGGAGTCCAAAGCCTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAATCTGATCCTTAGTACATTGCTAGGAGTCCAAAGCCTTTTTTTT  400

seq1  TCTTTCCTGTTAGCATATAAACAGAGCCTCTCTCTCAACATAGCTTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTGTTAGCATATAAACAGAGCCTCTCTCTCAACATAGCTTGCCT  450

seq1  TCCAGCAGTTAGAAGTCATC-AAAAATACAGACTGCTCCAATTTAGCAGG  499
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCCAGCAGTTAGAAGTCATCAAAAAATACAGACTGCTCCAATTTAGCAGG  500

seq1  CCACTTTTTATTTAGATCTGCTTCATTTTGACTTCTGTCACAGACAATTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTTTATTTAGATCTGCTTCATTTTGACTTCTGTCACAGACAATTT  550

seq1  GTAATACCATTATAACCATCAAACTTATAACCACCTTAATTTTGATAATT  599
      |||||||||||||||||||||||||||| |||| ||||||||||||||||
seq2  GTAATACCATTATAACCATCAAACTTAT-ACCA-CTTAATTTTGATAATT  598

seq1  AAAACAATTTGAAATAGTTACTATTATTTATTGAGACAGAGTTTCTCTTT  649
      ||||||||||||||||  ||||||||||||||||||||||||||||||||
seq2  AAAACAATTTGAAATAAGTACTATTATTTATTGAGACAGAGTTTCTCTTT  648

seq1  GTAGCCCAAGTTGA--TTGGATCTGTTCTATAAATTAGGCTGGCCTCAAA  697
      ||||||||||||||  | ||||||| |||||||  || |||| |||||||
seq2  GTAGCCCAAGTTGAATTGGGATCTG-TCTATAA--TA-GCTGACCTCAAA  694

seq1  TTTGCCATCTTATTTGTCATTGCCTTTTTCTCC  730
      ||   |||| || | ||||||| ||||||||||
seq2  TT--GCATCCTACTGGTCATTG-CTTTTTCTCC  724

seq1: chr12_102611816_102612057
seq2: B6Ng01-212A24.g_73_314 (reverse)

seq1  TCATCTTACCCCACCAAAAATCCCCCTCCCTGTGTTCTGAACTTATACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTACCCCACCAAAAATCCCCCTCCCTGTGTTCTGAACTTATACAA  50

seq1  GCGAGAGGTTGATGCCATAAAACTGAGTTCCTGCTTCAACAAGACTCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGAGGTTGATGCCATAAAACTGAGTTCCTGCTTCAACAAGACTCCCA  100

seq1  GCTCATTGTGTTTCTTTTAGCCCATCGACACTCACCATTCTGCTCAGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTGTGTTTCTTTTAGCCCATCGACACTCACCATTCTGCTCAGCCC  150

seq1  CAGAGAGACCCGGGTGGGACCTGGACCTCTCTCTTCTTGCCTGAACCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGACCCGGGTGGGACCTGGACCTCTCTCTTCTTGCCTGAACCTGC  200

seq1  TGGCAAAGAGCCGGCATATCAGACCATCAAGAATTAAAACTG  242
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAGAGCCGGCATATCAGACCATCAAGAATTAAAACTG  242