BAC Information

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BAC

Clone NameB6Ng01-214A15
Chromosome12 (Build37)
Map Location 98,115,060 - 98,116,192
singlet/doubletsinglet
Overlap genenone
Upstream gene1700019M22Rik, LOC100039664
Downstream geneEG628277, LOC382626, LOC100039743, LOC667732, LOC628351, LOC100039770
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214A15.bB6Ng01-214A15.g
ACCGA031398GA031399
length1,2141,123
definitionB6Ng01-214A15.b B6Ng01-214A15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccctgtagcagggggtcttcgctcgtgcctgaagatgtttctt
gtcccgggttttcggcaccacttcttgcgcacaccggactggccagcagt
aacgatgctgcaacaggatccttctgcacatgattattgggagagcttga
ttgtagagacgaagagaccccgagcccagaactggtgctgcttttatagg
cctaggagaggcgtgtctcacacccggattggttatgcactacgcctcat
ttgcatgttcctcatctgattggctactctctctcagtaccacacagagc
ctcattatcatacctcatttgcatgtctcacatctgattggttactctct
cagtaccttacagaacctcattatcatacctcatttgcatgtctcacatc
tgattggttatactctcagtaccttacagaacctcattgtcatgcccggg
ccaggcagtgtctttgcaaaaactttactgcatatgtacacattggttgt
ttgtccaaatttatgcgtggtggccagcagtagtcagtgccactctgcaa
cggcacatgtggcttcccacaatgtacagagtcaggaaattgaaccgcag
tgtgtagcaatggggcatgggacacaggaggttgcaaccagatagtccca
gatgccaggaaacaagaacatcccatgaacccacaggaatgacattagct
gaaatgccgtacaaatgggagggagaacctgtggagactatatccagagc
ttaggcatggccctccagttgaggaatggggccactcatgcatctccaaa
gttttaacccaaaaatgctcttgtctaaaggtaatacagggaaaatgagt
ggagcagagactgaaggaaaggacatccagaaactgccccacctcgggat
ccatcctacttgcagacacccaacccaaacactactactgaggccaagaa
gtgcttgctgacaggatcctggtgcagctgtctcctgagaaggctctgcc
agatactgaacaatatagatgtgaagcaccatcatgtgacaaagatggtg
tcacagcaccattgtcttgagcacagacccccatggagagtagggagacc
gaggagctgaggctttattggcatcagtataagcccttgtctggagcctg
atgccagtaagcatctagcatctaggtggtaaaatgggtggactgaagcc
gctcactttcaact
gaattctttgtatccctaacaaggtgcttctggagaaaactattcatatt
agacatttatataaatttatcagtaagcatgaactttgcattcttaaata
ggtttcatttttaacagtttcagaagttgcactggcaaaccatgaaagac
actggttgtgggttcctctcataagaattgacatccttgctaggcttatt
ggaccacaactctagactcatctattgagacagtgagacagcaggatcac
aagatttaggacttcttaggcaatttgaagatattcttaaaattaaggga
aaatatttgggttacatcctagcaatagaatttttgtttaacactcaaga
agcactggatccattctcagtataaaaccgtaacaaaatgaagtactata
gttccttagaaacagtacccactacacagagtgcatgcattctcatgggg
ccagatgatctagcaaaggctcatcgggatatcagtattgataaaagtat
cagttcctgcctatttgaaaaacagaggtaaaacacatcattagagtgaa
taaattggtaccaatccggttctataattctatgggtctaaaggtctaaa
aatgtgttgagtgatttaattatataataagaaatatccaatattagtaa
gatagttgaacaaatacatattcagagcccccctcttgctcacttgctct
cgctcgctctcatgcatgcacacacagtcacacacacacattaaaattag
ctctttttcaaaagcattcagtattctttgtaaaatgtctttcagggaaa
aacattgccaatgaaatagtggctgtcatcacctaattaataaaacaata
acaacaacaacaacaacaacacctttagttctgttaaaatatggtgtaaa
tttgatgaccttcaggagagcaattatgatgatggacatttatttagtgc
atgtccttttaatcagaattactcttgttttacttttttaaagatgacag
acttgcttttcaccttaattatataatacagagggaataaatggagggta
aatagaactgtgagcagcagatggaatctggagaaataaaataatctatc
tctagctcatctcagaatgtatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_98115060_98116192
seq2: B6Ng01-214A15.g_63_1185 (reverse)

seq1  AATACATACTGAAGATGGAAGCTAGAGATAAGATTTATTTTA-TTCT-CA  48
      ||||||| ||| |||||  |||||||||| ||| |||||||| |||| ||
seq2  AATACATTCTG-AGATG--AGCTAGAGAT-AGA-TTATTTTATTTCTCCA  45

seq1  GATTCCCATCTTGCTGCTCACAAGTTCTATTTACCCTCCATTTATTCCCT  98
      |||| ||||| |||||||||| ||||||||||||||||||||||||||||
seq2  GATT-CCATC-TGCTGCTCAC-AGTTCTATTTACCCTCCATTTATTCCCT  92

seq1  CTGTATTATATTAATTAAGGTGAAAAGCAAGTTCTTGTCATCTTTAAAAA  148
      |||||||||| |||||||||||||||||||||   |||||||||||||||
seq2  CTGTATTATA-TAATTAAGGTGAAAAGCAAGT--CTGTCATCTTTAAAAA  139

seq1  AGTAAAACAAGAGTAATTCTGATTAAAAGGACATGCACTAAAATAAATGT  198
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGTAAAACAAGAGTAATTCTGATTAAAAGGACATGCACT-AAATAAATGT  188

seq1  CCATCATCATAATTGCTCTCCTGAAGGTCATCAAATTTACACCATATTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATCATAATTGCTCTCCTGAAGGTCATCAAATTTACACCATATTTT  238

seq1  AACAGAACTAAAGGTGTTGTTGTTGTTGTTGTTGTTATTGTTTTATTAAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAACTAAAGGTGTTGTTGTTGTTGTTGTTGTTATTGTTTTATTAAT  288

seq1  TAGGTGATGACAGCCACTATTTCATTGGCAATGTTTTTCCCTGAAAGACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGATGACAGCCACTATTTCATTGGCAATGTTTTTCCCTGAAAGACA  338

seq1  TTTTACAAAGAATACTGAATGCTTTTGAAAAAGAGCTAATTTTAATGTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAAAGAATACTGAATGCTTTTGAAAAAGAGCTAATTTTAATGTGT  388

seq1  GTGTGTGACTGTGTGTGCATGCATGAGAGCGAGCGAGAGCAAGTGAGCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGACTGTGTGTGCATGCATGAGAGCGAGCGAGAGCAAGTGAGCAA  438

seq1  GAGGGGGGCTCTGAATATGTATTTGTTCAACTATCTTACTAATATTGGAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGGCTCTGAATATGTATTTGTTCAACTATCTTACTAATATTGGAT  488

seq1  ATTTCTTATTATATAATTAAATCACTCAACACATTTTTAGACCTTTAGAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTATTATATAATTAAATCACTCAACACATTTTTAGACCTTTAGAC  538

seq1  CCATAGAATTATAGAACCGGATTGGTACCAATTTATTCACTCTAATGATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGAATTATAGAACCGGATTGGTACCAATTTATTCACTCTAATGATG  588

seq1  TGTTTTACCTCTGTTTTTCAAATAGGCAGGAACTGATACTTTTATCAATA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTACCTCTGTTTTTCAAATAGGCAGGAACTGATACTTTTATCAATA  638

seq1  CTGATATCCCGATGAGCCTTTGCTAGATCATCTGGCCCCATGAGAATGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATCCCGATGAGCCTTTGCTAGATCATCTGGCCCCATGAGAATGCA  688

seq1  TGCACTCTGTGTAGTGGGTACTGTTTCTAAGGAACTATAGTACTTCATTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTCTGTGTAGTGGGTACTGTTTCTAAGGAACTATAGTACTTCATTT  738

seq1  TGTTACGGTTTTATACTGAGAATGGATCCAGTGCTTCTTGAGTGTTAAAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACGGTTTTATACTGAGAATGGATCCAGTGCTTCTTGAGTGTTAAAC  788

seq1  AAAAATTCTATTGCTAGGATGTAACCCAAATATTTTCCCTTAATTTTAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTCTATTGCTAGGATGTAACCCAAATATTTTCCCTTAATTTTAAG  838

seq1  AATATCTTCAAATTGCCTAAGAAGTCCTAAATCTTGTGATCCTGCTGTCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTTCAAATTGCCTAAGAAGTCCTAAATCTTGTGATCCTGCTGTCT  888

seq1  CACTGTCTCAATAGATGAGTCTAGAGTTGTGGTCCAATAAGCCTAGCAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCTCAATAGATGAGTCTAGAGTTGTGGTCCAATAAGCCTAGCAAG  938

seq1  GATGTCAATTCTTATGAGAGGAACCCACAACCAGTGTCTTTCATGGTTTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCAATTCTTATGAGAGGAACCCACAACCAGTGTCTTTCATGGTTTG  988

seq1  CCAGTGCAACTTCTGAAACTGTTAAAAATGAAACCTATTTAAGAATGCAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGCAACTTCTGAAACTGTTAAAAATGAAACCTATTTAAGAATGCAA  1038

seq1  AGTTCATGCTTACTGATAAATTTATATAAATGTCTAATATGAATAGTTTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATGCTTACTGATAAATTTATATAAATGTCTAATATGAATAGTTTT  1088

seq1  CTCCAGAAGCACCTTGTTAGGGATACAAAGAATTC  1133
      |||||||||||||||||||||||||||||||||||
seq2  CTCCAGAAGCACCTTGTTAGGGATACAAAGAATTC  1123