BAC Information

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BAC

Clone NameB6Ng01-214N10
Chromosome12 (Build37)
Map Location 44,547,899 - 44,548,981
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100039059, ENSMUSG00000066507, LOC100039081, LOC664854, Dnajb9, LOC100039062, Pnpla8, Nrcam
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214N10.bB6Ng01-214N10.g
ACCGA031979GA031980
length1,0451,070
definitionB6Ng01-214N10.b B6Ng01-214N10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaattttaaaaagcacttataataggaaaatactgaaagagagca
cgtggatccatacactagactaacgcggtaatggaacgtggaaaggaaaa
attaatgtatgggtagagaacgctagactccaggaggagagcttccttga
aactcttttgcctcatgagtgacttttaagcctttcggcttgtccagctg
actcgaaaggagagcgtagcatttctccctttctttttttaatttttagc
tgaagttttaggatgtctcgccttgtcatagctacagaccttaggagcac
tctaaagatgagtggaaacacaacgattactagtaaaacaatgtcaaaat
aataacaagtaggattatatattgaacccaatccagggggttcaatgcac
ttaggttgtttttcaaatctctagccaatttatcaatgttccaagtgtct
aaatgacttttactaatatctgaaatttctgtctttaacttttttaagtc
atgagaaatatcagtatctttttatactctctgtaagtgggccttggtcc
ttttttaatcagtggttgtgttataaggtaagggggtgacacaaatgtac
tggaaagaagcatgacattttagtagctaacctgttcttaatattagcaa
catcttgccccattgctagcactacttttttttagggcgttaacctttgc
tttcaattttttttatctataatatgtagctctgacaaggctacagagat
gttttttatgcatatcatttacaaaatgagtggtatgcagtttgtttaga
ctaaggctgtggtagataatgtaaaagaagtttaaaattgtaattaaagg
aagtaatttcctaaaatcagtgcttgctacaatatctcttaagtctaaat
aatttcggtttagtgttttttaagtttgtaactcttgaatttcttaacta
aggaacattttcttactttttcagggcagctaaacctaagcaggactttt
ttaccaacttcataacagtagattctctattttaatttggggacc

gaattcctgctttttgaaagtatttggaagacaacaagagggccttagac
attatgttttcagtatcccctgttcagaggacatggtttggggaaatcta
gaaaaactggctgtcaaaggcaactgtagaaagaggccaaagaggtacag
acacgcaggattgtgtgagctttgtcttcataaggacggaggggactaaa
gtgcatccagggcaggacaggagactcctgcataccaagaaatgaggaaa
tggttcatatgctatgctagacatagaagttttgtggccaaccagaatat
tcctgggctttcccaaatggcttcaacgtatcatgtcagtgaaccagtct
tttctaacatagaccattctgttgattctattaatgatgttatttactgt
agtattgggctttgtactagggtcactaggtatggtagtcaagttaagat
catgatagctgtggttgtgtcaagtatgtttcttatgcaaatgtattcag
aataattttgttatttaaaaataatttttacaaaggtttctcgagacaaa
ggtattatgcactataattttggctgtctatagatacaaaaattagaaac
ataataagcttaatggttacattgatttctaaagaacattacttaccaat
tactattatagatttatgaaatggaaatattacttgttcatattgatagc
ttaataggtatgctaattgcaattgttctgcctatttgtttctttctgtc
aaactttatttttattatttttaaattatctttgtatagaagatcttaat
gcatatcagtgcaggtgcctttggaggatagcagcttcaattttatctga
agttatggtgtcctctatgtgaaaaataatataataaattcaaatactag
taaaaatggagcaaaatttattattattattattattatattattatttg
cttacattctaatatcaaccctctctcttccaagtctgctcttgcagctc
tctcatgttttcccttccttttctcttctgagaggtgaacacattcatga
gtatatcccctaaaccatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_44547899_44548981
seq2: B6Ng01-214N10.g_70_1139 (reverse)

seq1  GTATGGTTTTAGGGGATAATACTCATG-ATGTGGTTCACCCTTCTCAGAG  49
      |||||| |||||||||| ||||||||| |||| |||||||  ||||||| 
seq2  GTATGG-TTTAGGGGAT-ATACTCATGAATGT-GTTCACC--TCTCAGAA  45

seq1  GAGAAAGGGAAGGGGAGAACATTGGAGAGGAGCTGCAAGAGCAGGAACTG  99
      |||||| |||| |||| |||||  |||| |||||||||||||||  ||| 
seq2  GAGAAAAGGAA-GGGAAAACAT--GAGA-GAGCTGCAAGAGCAG--ACTT  89

seq1  GGAGGAGAGGAGGGTTGATATTAGAATGTAAGCAAATAATAATAATAATA  149
      ||| |||| |||||||||||||||||||||||||||||||||| ||||||
seq2  GGAAGAGA-GAGGGTTGATATTAGAATGTAAGCAAATAATAAT-ATAATA  137

seq1  ATAATAATAATAATAAATTTTGCTCCATTTTTACTAGTATTTTGAATTTA  199
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATAATAATAATAATAAATTTTGCTCCATTTTTACTAGTA-TTTGAATTTA  186

seq1  TTATATTATTTTTCACATAGAGGACACCATAACTTCAGATAAAATTGAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTATTTTTCACATAGAGGACACCATAACTTCAGATAAAATTGAAG  236

seq1  CTGCTATCCTCCAAAGGCACCTGCACTGATATGCATTAAGATCTTCTATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATCCTCCAAAGGCACCTGCACTGATATGCATTAAGATCTTCTATA  286

seq1  CAAAGATAATTTAAAAATAATAAAAATAAAGTTTGACAGAAAGAAACAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATAATTTAAAAATAATAAAAATAAAGTTTGACAGAAAGAAACAAA  336

seq1  TAGGCAGAACAATTGCAATTAGCATACCTATTAAGCTATCAATATGAACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAGAACAATTGCAATTAGCATACCTATTAAGCTATCAATATGAACA  386

seq1  AGTAATATTTCCATTTCATAAATCTATAATAGTAATTGGTAAGTAATGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATATTTCCATTTCATAAATCTATAATAGTAATTGGTAAGTAATGTT  436

seq1  CTTTAGAAATCAATGTAACCATTAAGCTTATTATGTTTCTAATTTTTGTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAAATCAATGTAACCATTAAGCTTATTATGTTTCTAATTTTTGTA  486

seq1  TCTATAGACAGCCAAAATTATAGTGCATAATACCTTTGTCTCGAGAAACC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAGACAGCCAAAATTATAGTGCATAATACCTTTGTCTCGAGAAACC  536

seq1  TTTGTAAAAATTATTTTTAAATAACAAAATTATTCTGAATACATTTGCAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAAAATTATTTTTAAATAACAAAATTATTCTGAATACATTTGCAT  586

seq1  AAGAAACATACTTGACACAACCACAGCTATCATGATCTTAACTTGACTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACATACTTGACACAACCACAGCTATCATGATCTTAACTTGACTAC  636

seq1  CATACCTAGTGACCCTAGTACAAAGCCCAATACTACAGTAAATAACATCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTAGTGACCCTAGTACAAAGCCCAATACTACAGTAAATAACATCA  686

seq1  TTAATAGAATCAACAGAATGGTCTATGTTAGAAAAGACTGGTTCACTGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAGAATCAACAGAATGGTCTATGTTAGAAAAGACTGGTTCACTGAC  736

seq1  ATGATACGTTGAAGCCATTTGGGAAAGCCCAGGAATATTCTGGTTGGCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACGTTGAAGCCATTTGGGAAAGCCCAGGAATATTCTGGTTGGCCA  786

seq1  CAAAACTTCTATGTCTAGCATAGCATATGAACCATTTCCTCATTTCTTGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTTCTATGTCTAGCATAGCATATGAACCATTTCCTCATTTCTTGG  836

seq1  TATGCAGGAGTCTCCTGTCCTGCCCTGGATGCACTTTAGTCCCCTCCGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGGAGTCTCCTGTCCTGCCCTGGATGCACTTTAGTCCCCTCCGTC  886

seq1  CTTATGAAGACAAAGCTCACACAATCCTGCGTGTCTGTACCTCTTTGGCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGAAGACAAAGCTCACACAATCCTGCGTGTCTGTACCTCTTTGGCC  936

seq1  TCTTTCTACAGTTGCCTTTGACAGCCAGTTTTTCTAGATTTCCCCAAACC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTACAGTTGCCTTTGACAGCCAGTTTTTCTAGATTTCCCCAAACC  986

seq1  ATGTCCTCTGAACAGGGGATACTGAAAACATAATGTCTAAGGCCCTCTTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTCTGAACAGGGGATACTGAAAACATAATGTCTAAGGCCCTCTTG  1036

seq1  TTGTCTTCCAAATACTTTCAAAAAGCAGGAATTC  1083
      ||||||||||||||||||||||||||||||||||
seq2  TTGTCTTCCAAATACTTTCAAAAAGCAGGAATTC  1070


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