BAC Information

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BAC

Clone NameB6Ng01-215B04
Chromosome12 (Build37)
Map Location 16,605,109 - 16,767,454
singlet/doubletdoublet
Overlap geneNtsr2, Greb1
Upstream geneLOC217409, Trib2, LOC100043268, EG432636, LOC100043273, Lpin1
Downstream geneE2f6, Rock2, Pqlc3, 2410004P03Rik, EG668514, Kcnf1, LOC100043299, Pdia6, Atp6v1c2, Nol10, LOC672501, Odc1, LOC100042522, LOC100042528, Hpcal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215B04.bB6Ng01-215B04.g
ACCGA032148GA032149
length1,123927
definitionB6Ng01-215B04.b B6Ng01-215B04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,605,109 - 16,606,222)(16,766,529 - 16,767,454)
sequence
gaattctcccacccaggatggctgctttgtttaccaatgaacaccatttc
attcactaagatcataagacaaccaactatacatggtaatttttggaaat
caaattgcaatctctgaaaaggttatagtcacagtgactggggatgagac
ctgcttccgaaagagcttgcttcatgtgtcttggtaaagggctcagatcc
tttccaccgggaccttccccatagggttgcttgagttgacatagctttgg
cttccccaagagtggtgggtctaagagagggcaaggtttccaccttgcca
gaatactttttatggcctagtttcttgttaaagtcacacctgccaccaca
ttctgttcctgagaaccacgtgaataagcaaatccagccacacttggggg
aagtaggatcggactcctcacgttgaaagaatcaccagcaacccagatta
tcccaggcctgggtcatctctggagacggttacaaccagaagaagcacct
ttggcagcttccattaatcgtgtgcagactgagcctcagacagagcaaag
gaggccctctaccaacctctctcaggctgcatcctctctgcatgttgccc
tgccaatcctaacaccctcaactccaaactctccttttcttgggaagccc
tcgagcactatttagggcacatcttccaaactgagcttgcacacttaatt
tttttaaaggttgtatgtatgtgtgttttgtggcacatgtgtgtgagttc
ccaaggaggccagaggagatcattatccattggagcttggattctgaacc
acccaacatgggtgcttgggaatcaaactctaaacctctggcacagcagc
aagatacctgctgaagtcttgtttgcttccctgctccctcatcatggcct
ccactaactgctgtttcaaacatctgccccttctctgggctgttcaaggc
agaggtctaagtttttccctgttggtccatcatggccataagttgcccat
cctggtagctgtaatgacctctgggaatgaagcaatgaagggagaagtca
gccaaatggaaccttcttttcctcccttgttcacttcataaaccacggac
ccatttcaccagaagaaacacct
gaattcttatctctccttaagctgttgttggaagatccaccgcaaactgt
atcagtggggggaaaaaaacctcaaaacaacacaacaacaaaactgtagc
agctgggtcatcctgacctagaactgcctggaatgtttctaattgtggca
gctggcagtgcagagtcacctaggcagccagagcctcttcagtgtaagtt
cgtaatcagactcattgtttcacagctagggatacatgcccgagcctgtc
tggctctgtaggaggagggagatgtgcatcttccaagcagtgagctgggt
ccatccttaccggcattagtgggtaccaaggctgtcatgttactgatgct
ggagagctggtgggacaggggtgtggcttatgtgtttctgtgtggattgc
ctttgcagggcgtctaggacatgacacggttcatcaaagatttggtagga
tgtcactatcttttaaaactcttcagctcaacggtcttctaggcgtattt
tagacctcattttgctgagaaaatgaaggctctggggagtggccactcat
ccccattatatatcagatacccctaaatgtttgcctgagggagagtgagt
gagcaacgacactagtggaaggaaaagaccttgagagagactggctgata
tggacccagagtgagtccccacagttcaaaggtttcttcgcctcccaaag
acccagtttttaagttctaggttcaaaagacaggaggtgggggttgaacg
taggcaaacagcacaagacagatgaggaagtatgtttatgactgacagag
ggatttataatcttcattttaaataatgccaggggactggagagatggct
cagtgtttcaaacaatgggcttctcttgcagaacatgcaagtttgattcc
catcacccacgtgatggctcacagcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_16605109_16606222
seq2: B6Ng01-215B04.b_47_1169

seq1  GAATTCTCCCACCCAGGATGGCTGCTTTGTTTACCAATGAACACCATTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCACCCAGGATGGCTGCTTTGTTTACCAATGAACACCATTTC  50

seq1  ATTCACTAAGATCATAAGACAACCAACTATACATGGTAATTTTTGGAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTAAGATCATAAGACAACCAACTATACATGGTAATTTTTGGAAAT  100

seq1  CAAATTGCAATCTCTGAAAAGGTTATAGTCACAGTGACTGGGGATGAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGCAATCTCTGAAAAGGTTATAGTCACAGTGACTGGGGATGAGAC  150

seq1  CTGCTTCCGAAAGAGCTTGCTTCATGTGTCTTGGTAAAGGGCTCAGATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCCGAAAGAGCTTGCTTCATGTGTCTTGGTAAAGGGCTCAGATCC  200

seq1  TTTCCACCGGGACCTTCCCCATAGGGTTGCTTGAGTTGACATAGCTTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACCGGGACCTTCCCCATAGGGTTGCTTGAGTTGACATAGCTTTGG  250

seq1  CTTCCCCAAGAGTGGTGGGTCTAAGAGAGGGCAAGGTTTCCACCTTGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCAAGAGTGGTGGGTCTAAGAGAGGGCAAGGTTTCCACCTTGCCA  300

seq1  GAATACTTTTTATGGCCTAGTTTCTTGTTAAAGTCACACCTGCCACCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACTTTTTATGGCCTAGTTTCTTGTTAAAGTCACACCTGCCACCACA  350

seq1  TTCTGTTCCTGAGAACCACGTGAATAAGCAAATCCAGCCACACTTGGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTCCTGAGAACCACGTGAATAAGCAAATCCAGCCACACTTGGGGG  400

seq1  AAGTAGGATCGGACTCCTCACGTTGAAAGAATCACCAGCAACCCAGATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGGATCGGACTCCTCACGTTGAAAGAATCACCAGCAACCCAGATTA  450

seq1  TCCCAGGCCTGGGTCATCTCTGGAGACGGTTACAACCAGAAGAAGCACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGCCTGGGTCATCTCTGGAGACGGTTACAACCAGAAGAAGCACCT  500

seq1  TTGGCAGCTTCCATTAATCGTGTGCAGACTGAGCCTCAGACAGAGCAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAGCTTCCATTAATCGTGTGCAGACTGAGCCTCAGACAGAGCAAAG  550

seq1  GAGGCCCTCTACCAACCTCTCTCAGGCTGCATCCTCTCTGCATGTTGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCCTCTACCAACCTCTCTCAGGCTGCATCCTCTCTGCATGTTGCCC  600

seq1  TGCCAATCCTAACACCCTCAACTCCAAACTCTCCTTTTCTTGGGAAGCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATCCTAACACCCTCAACTCCAAACTCTCCTTTTCTTGGGAAGCCC  650

seq1  TCGAGCACTATTTAGGGCACATCTTCCAAACTGAGCTTGCACACTTAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGCACTATTTAGGGCACATCTTCCAAACTGAGCTTGCACACTTAATT  700

seq1  TTTTTAAAGGTTGTATGTATGTGTGTTTTGTGGCACATGTGTGTGAGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAGGTTGTATGTATGTGTGTTTTGTGGCACATGTGTGTGAGTTC  750

seq1  CCAAGGAGGCCAGAGGAGATCATTATCCATTGGAGCTTGGATTCTGAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGAGGCCAGAGGAGATCATTATCCATTGGAGCTTGGATTCTGAACC  800

seq1  ACCCAACATGGGTGC-TGGGAATCAAACTCT-AACCTCTGGCACAGCAGC  848
      ||||||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  ACCCAACATGGGTGCTTGGGAATCAAACTCTAAACCTCTGGCACAGCAGC  850

seq1  AAGATACCTGCTGAAGTCTTGTTTGCTTCCCTGCTCCCTCATCATGGCCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACCTGCTGAAGTCTTGTTTGCTTCCCTGCTCCCTCATCATGGCCT  900

seq1  CCACTAACTGCTGTTTCAAACATCTGCCCCTTCTCT-GGCTGTTCAAGGC  947
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCACTAACTGCTGTTTCAAACATCTGCCCCTTCTCTGGGCTGTTCAAGGC  950

seq1  AGTGGTCTAAGTTTTTCCCTGTTGGTCCATCAGTGCCATAAGTGGCCATC  997
      || |||||||||||||||||||||||||||||  ||||||||| |||   
seq2  AGAGGTCTAAGTTTTTCCCTGTTGGTCCATCATGGCCATAAGTTGCCCAT  1000

seq1  CCTGGTAGCTGTAGTGACCTCT-GGAATGAAGCAATAGAGGGAG-AGTCA  1045
      ||||||||||||| |||||||| |||||||||||||  |||||| |||||
seq2  CCTGGTAGCTGTAATGACCTCTGGGAATGAAGCAATGAAGGGAGAAGTCA  1050

seq1  GCCAAATGGAACCTTCTTTT-CTCCCTGGTTCACTTC-TAGACCAACGGC  1093
      |||||||||||||||||||| |||||| ||||||||| || ||||  | |
seq2  GCCAAATGGAACCTTCTTTTCCTCCCTTGTTCACTTCATAAACCACGGAC  1100

seq1  CCATTTCACCAGAAG--ACACCT  1114
      |||||||||||||||  ||||||
seq2  CCATTTCACCAGAAGAAACACCT  1123

seq1: chr12_16766529_16767454
seq2: B6Ng01-215B04.g_70_996 (reverse)

seq1  TGGCTGTGAGCCATCACGTGGGTGATGGGAATCAAACTTGCATGTTCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTGAGCCATCACGTGGGTGATGGGAATCAAACTTGCATGTTCTGC  50

seq1  AAGAGAAG-CCATTGCTTTGAACCACTGAGCCATCTCTCCAGT-CCCTGG  98
      |||||||| |||||| |||||| |||||||||||||||||||| ||||||
seq2  AAGAGAAGCCCATTG-TTTGAAACACTGAGCCATCTCTCCAGTCCCCTGG  99

seq1  CATTATTTAAAATGAAGATTATAAATCCCTCTGTCAGTCATAAACATACT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTAAAATGAAGATTATAAATCCCTCTGTCAGTCATAAACATACT  149

seq1  TCCTCATCTGTCTTGTGCTGTTTGCCTACGTTCAACCCCCACCTCCTGTC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATCTGTCTTGTGCTGTTTGCCTACGTTCAACCCCCACCTCCTGTC  199

seq1  TTTTGAACCTAGAACTTAAAAACTGGGTCTTTGGGAGGCGAAGAAACCTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAACCTAGAACTTAAAAACTGGGTCTTTGGGAGGCGAAGAAACCTT  249

seq1  TGAACTGTGGGGACTCACTCTGGGTCCATATCAGCCAGTCTCTCTCAAGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGTGGGGACTCACTCTGGGTCCATATCAGCCAGTCTCTCTCAAGG  299

seq1  TCTTTTCCTTCCACTAGTGTCGTTGCTCACTCACTCTCCCTCAGGCAAAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCCTTCCACTAGTGTCGTTGCTCACTCACTCTCCCTCAGGCAAAC  349

seq1  ATTTAGGGGTATCTGATATATAATGGGGATGAGTGGCCACTCCCCAGAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGGGTATCTGATATATAATGGGGATGAGTGGCCACTCCCCAGAGC  399

seq1  CTTCATTTTCTCAGCAAAATGAGGTCTAAAATACGCCTAGAAGACCGTTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTTCTCAGCAAAATGAGGTCTAAAATACGCCTAGAAGACCGTTG  449

seq1  AGCTGAAGAGTTTTAAAAGATAGTGACATCCTACCAAATCTTTGATGAAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAGAGTTTTAAAAGATAGTGACATCCTACCAAATCTTTGATGAAC  499

seq1  CGTGTCATGTCCTAGACGCCCTGCAAAGGCAATCCACACAGAAACACATA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTCATGTCCTAGACGCCCTGCAAAGGCAATCCACACAGAAACACATA  549

seq1  AGCCACACCCCTGTCCCACCAGCTCTCCAGCATCAGTAACATGACAGCCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACACCCCTGTCCCACCAGCTCTCCAGCATCAGTAACATGACAGCCT  599

seq1  TGGTACCCACTAATGCCGGTAAGGATGGACCCAGCTCACTGCTTGGAAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACCCACTAATGCCGGTAAGGATGGACCCAGCTCACTGCTTGGAAGA  649

seq1  TGCACATCTCCCTCCTCCTACAGAGCCAGACAGGCTCGGGCATGTATCCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATCTCCCTCCTCCTACAGAGCCAGACAGGCTCGGGCATGTATCCC  699

seq1  TAGCTGTGAAACAATGAGTCTGATTACGAACTTACACTGAAGAGGCTCTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTGAAACAATGAGTCTGATTACGAACTTACACTGAAGAGGCTCTG  749

seq1  GCTGCCTAGGTGACTCTGCACTGCCAGCTGCCACAATTAGAAACATTCCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCTAGGTGACTCTGCACTGCCAGCTGCCACAATTAGAAACATTCCA  799

seq1  GGCAGTTCTAGGTCAGGATGACCCAGCTGCTACAGTTTTGTTGTTGTGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTCTAGGTCAGGATGACCCAGCTGCTACAGTTTTGTTGTTGTGTT  849

seq1  GTTTTGAGGTTTTTTTCCCCCCACTGATACAGTTTGCGGTGGATCTTCCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAGGTTTTTTTCCCCCCACTGATACAGTTTGCGGTGGATCTTCCA  899

seq1  ACAACAGCTTAAGGAGAGATAAGAATTC  926
      ||||||||||||||||||||||||||||
seq2  ACAACAGCTTAAGGAGAGATAAGAATTC  927