BAC Information

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BAC

Clone NameB6Ng01-217H23
Chromosome12 (Build37)
Map Location 44,015,675 - 44,016,863
singlet/doubletsinglet
Overlap genenone
Upstream geneImmp2l, EG638533
Downstream geneLOC100039059, ENSMUSG00000066507
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217H23.bB6Ng01-217H23.g
ACCGA033889GA033890
length1,213500
definitionB6Ng01-217H23.b B6Ng01-217H23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactatgaggtcatggtgagagagtagccataattgacatgcatg
aaacagagcaagccagagcaagatcagccagcacgtaacagaatatttgt
ctgggaaatgggcagtctagtcgggttagaatagcatagaaccttcctaa
cttagtgccagcagtgtgttaataaagcataccaggtctctgtgtcttta
tctaggagctaaaacaggctagagtgtagagtggacatagaaacacttgc
agttacttgggaacaaaaggagcaaagagacttaagaaaagccccaagaa
tcacatttgcatgtgcatgtgtgtgtgcatgtgtgtgtgcgtgtgcgtgt
ttgtgtacatgtacatctgtgaatgtgtgaatgtttgcctgtgtgtgaat
gtatgtattttgaggttcagaatcagttccttaagcatggttttgaaggt
ttctgtccctgcccaggaaagtgttgtttctatccatttgggtttctggc
ctaagagtttatgaggctggttcagctatcctaagtgctgcaatgagact
ggggactaccgttatctctcatgtctaacagagattattctttgtattca
atgctattttcagttttctatgaaaactttgattatacttaaatggctta
acttttctacatttcacatctctatgttggctctagcaattctttgaatt
aattccactaaatacaattgtttataacatagaaattatcaatatgggga
actggcattgaatttatttctttccttatatttataaataattcattcat
ttaccaataatactaatttacataaagtataaaaaatcagtatttgtgtt
ttcatcctacaatacagtttattttcaaaaataatcaaatattccccagc
tcttagacaaccaacatatgccttgcagctatattttttttagttgattg
gctattagattaactgtctgtttccccaagcatttattataaaggaaagc
cagggatgaggatcaagcttgtttgaaaccaaggcttacttctgtactgc
accttaaggtattgctaggcaatgccttgggggagaatgaacaagccaat
aacctggaacaacttcatcagaacaggtcccacttctggaaggtcactga
tttgggattaaaccaaatcttcattcaacataacgcttcctgtacacaca
cattcacggaaag

gaattcaaagcccacgttcagctcaagaatgacctagcacattggtgaag
gccaggaagcaaagtttcggttctgcttaggtatttggcaagtcattgct
tggagacacctgtactgaaacaatactgagggaaagcacacagatccatt
tacctactaaagcaaggacagatctggagcattcattattataggatgct
atggtttcaggagactgtttctgtgaactttatgccatgggactgcatcc
aggcttttcagcatgtcactcaggtcactacaggagtggatgtagcataa
tcagcctccaaacactagcacctttgcatacactagcaagattttgctga
aaggaccctcatatagctgtctcttgtgagactatgccagggcctagcaa
acacaaaagtggatcctcacagtcagctattggatggaatacagggtccc
caatggaggagctagagaaagtacccaaggagctaaagggatctgcaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_44015675_44016863
seq2: B6Ng01-217H23.b_46_1258

seq1  GAATTCACTATGAGGTCATGGTGAGAGAGTAGCCATAA-GGACATGCATG  49
      ||||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  GAATTCACTATGAGGTCATGGTGAGAGAGTAGCCATAATTGACATGCATG  50

seq1  AAACAGAGCAAGCCAGAGCAAGATCAGCCAGCACGTAACAGAATATTTGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGCAAGCCAGAGCAAGATCAGCCAGCACGTAACAGAATATTTGT  100

seq1  CTGGGAAATGGGCAGTCTAGTCGGGTTAGAATAGCATAGAACCTTCCTAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAATGGGCAGTCTAGTCGGGTTAGAATAGCATAGAACCTTCCTAA  150

seq1  CTTAGTGCCAGCAGTGTGTTAATAAAGCATACCAGGTCTCTGTGTCTTTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTGCCAGCAGTGTGTTAATAAAGCATACCAGGTCTCTGTGTCTTTA  200

seq1  TCTAGGAGCTAAAACAGGCTAGAGTGTAGAGTGGACATAGAAACACTTGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAGCTAAAACAGGCTAGAGTGTAGAGTGGACATAGAAACACTTGC  250

seq1  AGTTACTTGGGAACAAAAGGAGCAAAGAGACTTAAGAAAAGCCCCAAGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTTGGGAACAAAAGGAGCAAAGAGACTTAAGAAAAGCCCCAAGAA  300

seq1  TCACATTTGCATGTGCATGTGTGTGTGCATGTGTGTGTGCGTGTGCGTGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTGCATGTGCATGTGTGTGTGCATGTGTGTGTGCGTGTGCGTGT  350

seq1  TTGTGTACATGTACATCTGTGAATGTGTGAATGTTTGCCTGTGTGTGAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTACATGTACATCTGTGAATGTGTGAATGTTTGCCTGTGTGTGAAT  400

seq1  GTATGTATTTTGAGGTTCAGAATCAGTTCCTTAAGCATGGTTTTGAAGGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTATTTTGAGGTTCAGAATCAGTTCCTTAAGCATGGTTTTGAAGGT  450

seq1  TTCTGTCCCTGCCCAGGAAAGTGTTGTTTCTATCCATTTGGGTTTCTGGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCCCTGCCCAGGAAAGTGTTGTTTCTATCCATTTGGGTTTCTGGC  500

seq1  CTAAGAGTTTATGAGGCTGGTTCAGCTATCCTAAGTGCTGCAATGAGACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGTTTATGAGGCTGGTTCAGCTATCCTAAGTGCTGCAATGAGACT  550

seq1  GGGGACTACCGTTATCTCTCATGTCTAACAGAGATTATTCTTTGTATTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTACCGTTATCTCTCATGTCTAACAGAGATTATTCTTTGTATTCA  600

seq1  ATGCTATTTTCAGTTTTCTATGAAAACTTTGATTATACTTAAATGGCTTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATTTTCAGTTTTCTATGAAAACTTTGATTATACTTAAATGGCTTA  650

seq1  ACTTTTCTACATTTCACATCTCTATGTTGGCTCTAGCAATTCTTTGAATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCTACATTTCACATCTCTATGTTGGCTCTAGCAATTCTTTGAATT  700

seq1  AATTCCACTAAATACAATTGTTTATAACATAGAAATTATCAATATGGGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCACTAAATACAATTGTTTATAACATAGAAATTATCAATATGGGGA  750

seq1  ACTGGCATTGAATTTATTTCTTTCCTTATATTTATAAATAATTCATTCAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCATTGAATTTATTTCTTTCCTTATATTTATAAATAATTCATTCAT  800

seq1  TTACCAATAATACTAATTTACATAAAGTATAAAAAATCAGTATTTGTGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAATAATACTAATTTACATAAAGTATAAAAAATCAGTATTTGTGTT  850

seq1  TTCATCCTACAATACAGTTTATTTTCAAAAATAATCAAATATTCCCCAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCTACAATACAGTTTATTTTCAAAAATAATCAAATATTCCCCAGC  900

seq1  TC-TAGACAACCAACATATGCC-TGCAGCTATA-TTTTTTTAGTTGATTG  946
      || ||||||||||||||||||| |||||||||| ||||||||||||||||
seq2  TCTTAGACAACCAACATATGCCTTGCAGCTATATTTTTTTTAGTTGATTG  950

seq1  GCTATTAGA-TAACTGTCTGTTTCCCC-AGCATTTATTATAAAGGAAAGC  994
      ||||||||| ||||||||||||||||| ||||||||||||||||||||||
seq2  GCTATTAGATTAACTGTCTGTTTCCCCAAGCATTTATTATAAAGGAAAGC  1000

seq1  CA-GGATGA-GATCAAAGCTGTTTGAAACAAAAGCTTACTTCTGTACTGC  1042
      || |||||| ||||||   |||||||||| || |||||||||||||||||
seq2  CAGGGATGAGGATCAAGCTTGTTTGAAACCAAGGCTTACTTCTGTACTGC  1050

seq1  ACCTTAAAGTA-TGCTAGGCAATGCCTT--GGGAGAATGA--CAGCC-AT  1086
      ||||||| ||| ||||||||||||||||  ||||||||||   |||| ||
seq2  ACCTTAAGGTATTGCTAGGCAATGCCTTGGGGGAGAATGAACAAGCCAAT  1100

seq1  AA-CTG--ACAACTTCA-CAG-ACA-GTCCCACTTCT-GAAAGTCACTGA  1129
      || |||  ||||||||| ||| ||| ||||||||||| ||| ||||||||
seq2  AACCTGGAACAACTTCATCAGAACAGGTCCCACTTCTGGAAGGTCACTGA  1150

seq1  TTT-GGATTAAACAAAATCCTCATCACACA-AACGCTTCCTGTA-ACACA  1176
      ||| ||||||||| ||||| ||||   ||| ||||||||||||| |||||
seq2  TTTGGGATTAAACCAAATCTTCATTCAACATAACGCTTCCTGTACACACA  1200

seq1  CATTCAGGGAAAG  1189
      |||||| ||||||
seq2  CATTCACGGAAAG  1213


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