BAC Information

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BAC

Clone NameB6Ng01-217L02
Chromosome12 (Build37)
Map Location 95,518,561 - 95,519,660
singlet/doubletsinglet
Overlap genenone
Upstream gene2610022K04Rik-ps, EG633639
Downstream geneLOC217786, LOC100039603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217L02.bB6Ng01-217L02.g
ACCGA034026GA034027
length1,1251,107
definitionB6Ng01-217L02.b B6Ng01-217L02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtagtagttcaagcctgatgctagactaaattgaaagatgttt
ttgagacctctaagcaattgcaaatggaggctgaggttcaaattcaaact
tcttaaatatatgctcagtcagttcaggagagagcttcaagtttaatgct
tttctggaaagcagtctggcggtttctcagaaaattggacatggttatac
cggaggatccctcaatacctctcctgggcatatatccagaagatgttata
actagtaaggaagaaacatgctccactatgttcatagcagccttatttat
aatagccagaagctggaaagaacccagatgcccctcaacagaggaatgga
tacaaaaaaatgtggtacatttgcacaatggagtactactcagctattta
aaagaatgaatttatgaaattcctaggcaaatggttggtcctggagggca
ttatcctgagtgaggtaacccaatcataaaagaactcaaatgatatgtac
tcactgataagtggatattagcccagaaacttagaatacccaagatataa
gttacaatttgcaaaacacatgaaactcaagaagaacgaagaccaaagtg
tgcacactttgtcccttcttaaaattgggaacaaaacacccatgggagga
gttacagagacaaagtctggagctgagacaaaaggatggaccatctagag
actgccatatccagggatccatcccataatcagcctccaaacgctgacac
cattgcatacactagcaagattgtgctgataggaccctgatatagctgtc
tcgagtgagactacaccggggcctagcaaacacaaaagtagatgctcaca
gtcagctattgggatgggatcacaggacccccaatggaggagctatagaa
aatacccaagcagctaaaagggatctgcatcccttacaggtgaaacacat
tatggacctaaccagtaccccagagctcttgactctagctgcatatggta
tcaaaagatggccctagtcagtcatccttgaaagagaggcccaattgcac
ttgccaaacttttattgcccagttacagggacgccagggccaaaaagtgg
gattcggtgggttagggggtggagc
gaattccatgatttaaaacattaattccaaaataactaaagattggtaaa
tctggcaaacaaatgataacaagttaaaaccatatgacataaatataaga
tttatataatgttaaaaatgttaatcctttacaatataaatagaagacag
tgctatttttgaaaatcatgctaggttttgaaaaacttggcatctcagat
agtttggaaatttactcagattgaacagtttagtaatatctcatttcagc
tttagtttctgtagtctataacttcatataaagttaccaatatacacttc
atttattagcatttaaaaatcagcatataggcataaattagatttatgtt
taatttgctacatgttagtgtgtttctttatgagttatatgtaaagtaga
gatagacaattagaaagcaaagatacattgttaatcctaagaatcacaaa
aacaaaacacaaaaaatctaaaaaaaagtataaatgtgtgaccaaaatga
gtcaatttactttaaaaatacatttaaatattaaactctatctggcagtt
gatttggtactttcccttttcatgtttttgtaactgactctacagatctc
atagcccttaaaatggaaaaacaaagttaagttcccatgaatataaatgt
gtgtgggaagttatcataacactttatcttccagtctaagcaatttgacc
atgctagcagttttctgtgggcttggcttgtttgcaagaacaaaacaaga
tcttcatgtcccttcagctctgtttccaagctccacaactggcggaatgc
tctggcatttaacacagctctggcttctcatgtcctgtccaggctcatgg
gtttgaacgtcttaggacaagttaatcagaacacacatatttctctagat
cactggcaggtctcctgagatgacatggcattttgacctttctgtaaagc
aaacatgcttactgtccctttggcataatcaagcctctgcataatttgaa
cattcgctgtgttgatattaaattccagaatcattaacaatacaatgtaa
agtgaatcaggaaactgtatcaaaactttctctttcttttagaaaaacca
tataact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_95518561_95519660
seq2: B6Ng01-217L02.g_69_1175

seq1  GAATTCCATGATTTAAAACATTAATTCCAAAATAACTAAAGATTGGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGATTTAAAACATTAATTCCAAAATAACTAAAGATTGGTAAA  50

seq1  TCTGGCAAACAAATGATAACAAGTTAAAACCATATGACATAAATATAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAAACAAATGATAACAAGTTAAAACCATATGACATAAATATAAGA  100

seq1  TTTATATAATGTTAAAAATGTTAATCCTTTACAATATAAATAGAAGACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATAATGTTAAAAATGTTAATCCTTTACAATATAAATAGAAGACAG  150

seq1  TGCTATTTTTGAAAATCATGCTAGGTTTTGAAAAACTTGGCATCTCAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTTTTGAAAATCATGCTAGGTTTTGAAAAACTTGGCATCTCAGAT  200

seq1  AGTTTGGAAATTTACTCAGATTGAACAGTTTAGTAATATCTCATTTCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGAAATTTACTCAGATTGAACAGTTTAGTAATATCTCATTTCAGC  250

seq1  TTTAGTTTCTGTAGTCTATAACTTCATATAAAGTTACCAATATACACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTCTGTAGTCTATAACTTCATATAAAGTTACCAATATACACTTC  300

seq1  ATTTATTAGCATTTAAAAATCAGCATATAGGCATAAATTAGATTTATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTAGCATTTAAAAATCAGCATATAGGCATAAATTAGATTTATGTT  350

seq1  TAATTTGCTACATGTTAGTGTGTTTCTTTATGAGTTATATGTAAAGTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGCTACATGTTAGTGTGTTTCTTTATGAGTTATATGTAAAGTAGA  400

seq1  GATAGACAATTAGAAAGCAAAGATACATTGTTAATCCTAAGAATCACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGACAATTAGAAAGCAAAGATACATTGTTAATCCTAAGAATCACAAA  450

seq1  AACAAAACACAAAAAATCTAAAAAAAAGTATAAATGTGTGACCAAAATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACACAAAAAATCTAAAAAAAAGTATAAATGTGTGACCAAAATGA  500

seq1  GTCAATTTACTTTAAAAATACATTTAAATATTAAACTCTATCTGGCAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTTACTTTAAAAATACATTTAAATATTAAACTCTATCTGGCAGTT  550

seq1  GATTTGGTACTTTCCCTTTTCATGTTTTTGTAACTGACTCTACAGATCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGGTACTTTCCCTTTTCATGTTTTTGTAACTGACTCTACAGATCTC  600

seq1  ATAGCCCTTAAAATGGAAAAACAAAGTTAAGTTCCCATGAATATAAATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCCTTAAAATGGAAAAACAAAGTTAAGTTCCCATGAATATAAATGT  650

seq1  GTGTGGGAAGTTATCATAACACTTTATCTTCCAGTCTAAGCAATTTGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGAAGTTATCATAACACTTTATCTTCCAGTCTAAGCAATTTGACC  700

seq1  ATGCTAGCAGTTTTCTGTGGGCTTGGCTTGTTTGCAAGAACAAAACAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAGCAGTTTTCTGTGGGCTTGGCTTGTTTGCAAGAACAAAACAAGA  750

seq1  TCTTCATGTCCCTTCAGCTCTGTTTCCAAGCTCCACAACTGGCGGAATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATGTCCCTTCAGCTCTGTTTCCAAGCTCCACAACTGGCGGAATGC  800

seq1  TCTGGCATTTAACACAGCTCTGGCTTCTCATGTCCTGTCCAGGCTCATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCATTTAACACAGCTCTGGCTTCTCATGTCCTGTCCAGGCTCATGG  850

seq1  TTTTGAACGTC-TAGGACAAGTTAATCAGAACACACATA-TTCTCTAGAT  898
       |||||||||| ||||||||||||||||||||||||||| ||||||||||
seq2  GTTTGAACGTCTTAGGACAAGTTAATCAGAACACACATATTTCTCTAGAT  900

seq1  CACTGGCAGGTCTCCTGAGATGACATGGCA-TTTGACCTTTCTGTAAAGC  947
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CACTGGCAGGTCTCCTGAGATGACATGGCATTTTGACCTTTCTGTAAAGC  950

seq1  -AACATGCTTACTGTCCCTTT-GCAT-ATCAAGCCTCTGCAT-ATTTGAA  993
       |||||||||||||||||||| |||| ||||||||||||||| |||||||
seq2  AAACATGCTTACTGTCCCTTTGGCATAATCAAGCCTCTGCATAATTTGAA  1000

seq1  CA-TCGCTGTGTTGAATAATTAATTTCAGAAT-ATTAAAAATAACAATGG  1041
      || ||||||||||| ||| | |||| |||||| ||||| ||| |||||| 
seq2  CATTCGCTGTGTTG-ATATTAAATTCCAGAATCATTAACAAT-ACAATG-  1047

seq1  TAAAAGTG-ATCAGGAAACTGTAACTAAAACTTCTCTTTCTTTTAGAAAA  1090
        |||||| |||||||||||||| | |||  |||||||||||||||||||
seq2  -TAAAGTGAATCAGGAAACTGTATCAAAACTTTCTCTTTCTTTTAGAAAA  1096

seq1  A-CATATAACT  1100
      | |||||||||
seq2  ACCATATAACT  1107