MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-217O14
Chromosome	12 (Build37)
Map Location	54,159,052 - 54,159,978
singlet/doublet	singlet
Overlap gene	Akap6
Upstream gene	LOC100039627, Nubpl, Arhgap5
Downstream gene	Npas3
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039627 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039627
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 ESTs, 5 Proteins

name	Nubpl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76826 MGI:1924076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arhgap5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11855 MGI:1332637
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akap6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238161 MGI:3050566
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Npas3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27386 MGI:1351610
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039627 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263238 GeneID:100039627
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 ESTs, 5 Proteins product : similar to CD79A antigen (immunoglobulin-associated alpha) transcript_id : XM_001473232.1

name	Nubpl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110626046 GeneID:76826 MGI:1924076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleotide binding protein-like transcript_id : NM_029760.1

name	Arhgap5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86262150 GeneID:11855 MGI:1332637
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 5 transcript_id : NM_009706.2

name	Akap6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116517310 GeneID:238161 MGI:3050566
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein 6 transcript_id : NM_198111.2

name	Npas3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305318 GeneID:27386 MGI:1351610
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuronal PAS domain protein 3 transcript_id : NM_013780.1

name	LOC100039627 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263239 GeneID:100039627
definition	codon_start : 1 product : similar to CD79A antigen (immunoglobulin-associated alpha) protein_id : XP_001473282.1

name	Nubpl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110626047 GeneID:76826 MGI:1924076
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : nucleotide binding protein-like protein_id : NP_084036.1

name	Arhgap5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86262151 GeneID:11855 MGI:1332637
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0005100 - Rho GTPase activator activity [Evidence IEA] GO_process : GO:0008361 - regulation of cell size [Evidence IMP]; GO:0007266 - Rho protein signal transduction [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 product : Rho GTPase activating protein 5 protein_id : NP_033836.2

name	Akap6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116517311 GeneID:238161 MGI:3050566
definition	GO_component : GO:0005635 - nuclear envelope [Evidence ISS]; GO:0016529 - sarcoplasmic reticulum [Evidence ISS] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0051018 - protein kinase A binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : anchor protein 6; A-kinase anchoring protein alpha; A-kinase anchoring protein beta product : A kinase (PRKA) anchor protein 6 protein_id : NP_932779.2

name	Npas3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305319 CCDS:CCDS25907.1 GeneID:27386 MGI:1351610
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0000155 - two-component sensor activity [Evidence IEA] GO_process : GO:0007610 - behavior [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0042711 - maternal behavior [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0035176 - social behavior [Evidence IMP]; GO:0006350 - transcription [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 exception : mismatches in translation product : neuronal PAS domain protein 3 protein_id : NP_038808.1

clone name	MSMg01-519F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252K11
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-217O14.b	B6Ng01-217O14.g
ACC	GA034179	GA034180
length	1,213	931
definition	B6Ng01-217O14.b	B6Ng01-217O14.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaaggcctatacctaaacatgataaaagcaatctacagcaaacca gtagccaacatcaaattaaatggtgagaagctggaagcaatcccactaaa atcagcgactagacaaggctgcccactttctccctacctattccacattg tacttgaagtcctagccagagcaattagacaacaaaaggagatcaagggg atacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatat gatagtatatataagtgaccctaaaaattccaccagagaactcctaagcc tgataaacagcttcaatcaagtagctggataaaaaattaactcaaacaag tcaatggcctttttgtacacaaaggataaacaggctgagaaagaaattag ggaaacaacatccttctcaatagtctcaaataatataaaataccttgaca tggctctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg ctcatggattggcaggatcaacattgtaaaaatggctatctttccaaaag caatctacagattcaatgcaatccctatcaaaattccaactcaattcttc aacgaattagaaagggcaatcggcagattcatctggaataacaaaaaaac ctaggatagcaaaaactcttctccaggataaaagaacctctggtggaatt accatgcctgacctaaagctgtactacagagcaattgtgataaaaactgc atggtactggtatagtgacagacaagtagaccaatggaacagaattttta agacccagagatgaacccacacacctatggtcacttgatctttgacaagg gagctaaaaccatccagtggaaaaagacacattttcaacaatggtgctgg cacaactggcggttatcatgtagaaaaatggcgaattgatccattcctat ctcttgtactaaggtcaatctaagtggattaaggactccacaataaaaca gagacctgaaacttattgagggagaaagtaagggaaaggctcgtagatat tggttacaggtaaaaatctggaatagaacattcaatgggcttggactgta gatcgagatcgtataattggaactctcatataaaattggcaaaggctttc gtgccaacagcca	gaattctcctgttgttgtatatgaagacaacaaacagcagttcatctgtc acttagcttgagaaactattcattgacttagtgctttctaacagccccaa ctattgaaaattcttcatcattacccaaagaagacatgatagccatcatt ctttgggggctcctttctccaccagtaaccaagagtcagccagcttctgt tggctattttgaggatattttgacactcaagcaaagtaagtattaatggt gagaattttggggagtagctaagaaactgattgttgtatctaatttaccg tcaccccatatgtagtagaatctgattggtaaattgagttttagaggaga ggacatatacacaagaggtcagtgcagaccatgtaggaatgtggtgtgtt tgaagtttgactttagttaagtctaatgtgaggtttagtttatatgtttg ttacagtaaagggtaaatttgttcttttaactacatataaaagactgcta aaatctgtaaatttccttctcaattcttcttttgtttggcttaagaaaat gcaatagcactgtactcgattacatgaaaataaatgtgtttagcagtgtc ttttggtaaggggttagaaaacaaaagaaactagactctaaaataggaat gtctgggaaaaagaagctgggtttgttctgctaatttctcctcacatttc ccatcctgcactgcatcctaacagatagtgcatatctgcacaactattct tactacatgctgacatgccattctacccatttcctatacagtactgcaaa ccttaattagaacagttatgacccgcatcctccactgaagtacaacacaa agttgagacagcccagggtgatttgcagatttcagaaaactatgggctta gccttaagaacacattgcaattgcaccctgt
quality values	Open. Hide. 54 33 27 35 58 32 24 30 58 58 58 58 54 52 58 54 58 62 62 52 62 62 41 32 49 62 47 62 62 62 62 62 21 26 13 16 20 20 18 20 21 29 56 31 46 56 62 62 47 59 62 62 62 62 62 59 59 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 56 54 49 54 59 59 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 59 59 62 62 59 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 42 62 62 62 62 62 54 62 62 52 62 62 62 62 58 58 58 58 54 47 58 58 58 58 58 58 58 58 58 58 43 58 58 58 54 58 58 54 54 58 49 58 58 58 58 54 52 44 40 58 58 58 52 52 58 58 54 58 49 58 58 58 58 58 52 41 35 54 58 58 58 58 39 58 58 58 58 58 42 58 58 58 47 58 58 58 46 53 52 48 58 37 46 58 54 58 58 54 54 58 58 53 51 58 58 58 53 42 58 58 50 58 49 58 58 58 58 49 53 53 30 58 58 58 51 54 50 58 51 58 54 53 51 50 58 53 39 58 39 19 49 54 58 50 52 53 53 53 58 58 50 47 49 50 40 58 58 51 50 51 53 50 30 39 50 58 50 42 53 51 58 58 52 37 50 37 50 51 41 58 30 51 44 52 42 54 58 50 49 58 37 37 32 50 50 54 50 51 39 51 49 47 36 44 41 30 53 54 45 54 54 51 37 42 45 49 52 39 54 54 51 54 54 32 35 37 45 34 35 49 29 27 52 39 52 42 54 54 54 45 50 45 51 51 45 53 42 45 34 17 25 30 34 18 32 54 54 51 29 51 20 20 53 45 42 37 45 54 21 33 45 53 33 27 40 32 37 53 26 37 41 31 34 37 53 52 13 46 39 32 53 40 36 40 40 53 32 28 39 42 33 45 31 40 32 21 39 32 31 36 31 41 32 41 31 30 42 53 51 51 31 30 28 33 33 27 31 26 46 15 31 36 36 51 31 30 28 43 34 31 30 43 33 36 28 37 36 29 25 36 36 43 35 31 42 25 19 6 23 21 46 12 8 36 28 24 12 33 30 24 46 47 46 6 6 31 27 42 28 46 31 31 32 46 18 21 32 33 31 25 22 46 36 17 31 23 37 18 31 32 33 33 27 31 35 20 38 28 36 31 44 30 21 31 25 32 47 21 25 30 30 19 13 27 48 19 28 14 24 18 27 48 46 30 32 35 21 37 19 33 14 19 11 31 26 15 41 41 38 28 20 25 11 43 13 16 38 48 48 28 28 23 30 32 38 24 17 37 37 9 27 33 22 21 37 22 21 30 11 17 32 31 33 32 22 32 33 28 19 27 25 32 27 31 19 8 4 4 31 43 47 48 22 18 22 7 8 6 18 22 12 30 30 9 20 11 33 22 23 14 11 30 27 24 23 22 11 27 15 6 8 9 16 16 14 24 15 13 21 20 19 28 31 9 14 20 13 15 16 11 24 28 21 8 15 8 9 21 14 29 7 13 12 23 11 7 5 9 11 23 25 30 11 23 5 9 27 8 5 4 3 6 7 15 30 9 19 20 16 6 8 3 6 7 5 22 8 17 7 24 28 22 16 16 9 6 16 22 14 3 18 15 8 5 17 5 11 6 4 16 6 5 6 8 8 6 19 6 2 3 6 23 3 5 3 1 7 29 30 30 3 3 3 3 7 5 17 5 6 4 4 5 22 4 6 7 5 20 6 13 4 7 22 9 11 13 10 9 5 1 5 5 6 5 14 6 18 6 6 6 2 1 3 2 8 4 3 5 3 1 12 5 5 12 13 3 4 9 4 18 8 16 5 5 7 6 8 17 28 11 7 6 6 5 8 4 15 7 6 4 6 4 4 5 10 7 5 7 5 6 8 8 3 6 6 4 1 3	Open. Hide. 62 38 43 47 62 62 62 62 62 51 51 22 20 26 16 20 21 21 22 35 46 37 37 49 56 62 59 59 62 62 62 59 62 62 59 59 62 44 62 62 62 62 59 59 62 62 62 62 62 59 62 59 62 62 62 51 56 56 56 38 28 28 54 43 56 59 59 62 62 62 59 59 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 59 59 62 62 62 59 54 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 54 43 62 47 56 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 47 47 62 62 62 62 54 54 58 58 54 58 58 52 54 54 54 47 58 54 31 45 54 58 58 58 58 54 54 58 54 58 52 58 54 58 58 58 58 58 58 58 52 45 39 58 58 41 45 32 58 58 58 58 54 58 58 54 54 58 58 58 58 58 58 54 54 58 54 54 52 54 54 54 58 49 53 58 54 41 58 58 58 58 52 58 58 58 34 30 58 42 53 58 34 58 58 58 52 41 49 48 51 53 53 52 40 53 52 54 49 39 39 53 53 53 54 47 51 51 49 50 50 27 54 58 58 58 58 52 46 58 58 46 52 58 46 58 53 58 20 34 41 40 51 35 32 54 42 53 49 58 58 41 54 49 35 47 51 29 58 50 49 30 39 52 28 58 58 58 51 40 46 58 58 38 28 46 58 35 41 45 52 28 53 31 53 53 52 24 54 51 51 52 52 37 39 33 32 37 53 31 52 39 46 54 31 38 54 54 54 46 16 33 36 19 32 52 52 54 54 41 54 35 40 13 24 33 35 31 19 30 33 13 40 54 37 53 21 28 53 38 32 31 31 28 32 47 33 22 51 42 39 23 16 51 23 45 23 18 31 31 32 24 31 39 39 32 19 51 7 11 26 31 32 16 33 31 30 30 21 32 37 22 31 31 30 42 33 32 37 25 34 30 32 29 31 37 42 16 33 23 27 26 25 25 22 34 42 32 38 34 34 28 19 36 29 19 26 27 33 32 38 33 26 18 46 8 15 42 48 12 15 32 32 21 17 13 29 24 28 18 32 23 18 33 25 31 48 31 22 27 30 34 14 21 31 13 15 27 38 18 7 9 30 37 24 21 25 24 34 17 46 32 13 22 32 36 32 21 24 22 6 8 20 13 35 16 36 27 17 19 12 5 9 6 10 24 11 44 30 24 8 8 24 11 6 11 11 10 18 31 44 7 5 7 33 15 5 16 21 5 4 4 6 5 12 6 19 11 43 25 16 6 6 23 34 31 32 8 6 5 6 9 27 9 10 9 6 7 5 7 8 6 6 10 8 8 7 15 11 11 19 12 37 16 8 14 13 13 28 27 14 15 5 16 29 15 3 3 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_54159052_54159978
seq2: B6Ng01-217O14.g_72_1002

seq1  GAATTCTCCTGTTGTTGTATATGAAGACAACAAACAGCAGTTCATCTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGTTGTTGTATATGAAGACAACAAACAGCAGTTCATCTGTC  50

seq1  ACTTAGCTTGAGAAACTATTCATTGACTTAGTGCTTTCTAACAGCCCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGCTTGAGAAACTATTCATTGACTTAGTGCTTTCTAACAGCCCCAA  100

seq1  CTATTGAAAATTCTTCATCATTACCCAAAGAAGACATGATAGCCATCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGAAAATTCTTCATCATTACCCAAAGAAGACATGATAGCCATCATT  150

seq1  CTTTGGGGGCTCCTTTCTCCACCAGTAACCAAGAGTCAGCCAGCTTCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGGGCTCCTTTCTCCACCAGTAACCAAGAGTCAGCCAGCTTCTGT  200

seq1  TGGCTATTTTGAGGATATTTTGACACTCAAGCAAAGTAAGTATTAATGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATTTTGAGGATATTTTGACACTCAAGCAAAGTAAGTATTAATGGT  250

seq1  GAGAATTTTGGGGAGTAGCTAAGAAACTGATTGTTGTATCTAATTTACCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTTTGGGGAGTAGCTAAGAAACTGATTGTTGTATCTAATTTACCG  300

seq1  TCACCCCATATGTAGTAGAATCTGATTGGTAAATTGAGTTTTAGAGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCCATATGTAGTAGAATCTGATTGGTAAATTGAGTTTTAGAGGAGA  350

seq1  GGACATATACACAAGAGGTCAGTGCAGACCATGTAGGAATGTGGTGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATATACACAAGAGGTCAGTGCAGACCATGTAGGAATGTGGTGTGTT  400

seq1  TGAAGTTTGACTTTAGTTAAGTCTAATGTGAGGTTTAGTTTATATGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTTGACTTTAGTTAAGTCTAATGTGAGGTTTAGTTTATATGTTTG  450

seq1  TTACAGTAAAGGGTAAATTTGTTCTTTTAACTACATATAAAAGACTGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTAAAGGGTAAATTTGTTCTTTTAACTACATATAAAAGACTGCTA  500

seq1  AAATCTGTAAATTTCCTTCTCAATTCTTCTTTTGTTTGGCTTAAGAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGTAAATTTCCTTCTCAATTCTTCTTTTGTTTGGCTTAAGAAAAT  550

seq1  GCAATAGCACTGTACTCGATTACATGAAAATAAATGTGTTTAGCAGTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAGCACTGTACTCGATTACATGAAAATAAATGTGTTTAGCAGTGTC  600

seq1  TTTTGGTAAGGGGTTAGAAAACAAAAGAAACTAGACTCTAAAATAGGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTAAGGGGTTAGAAAACAAAAGAAACTAGACTCTAAAATAGGAAT  650

seq1  GTCTGGGAAAAAGAAGCTGGGTTTGTTCTGCTAATTTCTCCTCACATTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGGAAAAAGAAGCTGGGTTTGTTCTGCTAATTTCTCCTCACATTTC  700

seq1  CCATCCTGCACTGCATCCTAACAGATAGTGCATATCTGCACAACTATTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTGCACTGCATCCTAACAGATAGTGCATATCTGCACAACTATTCT  750

seq1  TACTACATGCTGACATGCCATTCTA-CCATTTCCTATACAGTACTGCAAA  799
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TACTACATGCTGACATGCCATTCTACCCATTTCCTATACAGTACTGCAAA  800

seq1  CCTTAATTAGAACAGTTATGACCCGCATCCT-CACTGAAGTAC-ACACAA  847
      ||||||||||||||||||||||||||||||| ||||||||||| ||||||
seq2  CCTTAATTAGAACAGTTATGACCCGCATCCTCCACTGAAGTACAACACAA  850

seq1  AGGTGGAGACAGCCCAGGGTGATGTGCAGATTTTCAGAAAACTAT-GGCA  896
      | || |||||||||||||||||| |||||| |||||||||||||| ||| 
seq2  A-GTTGAGACAGCCCAGGGTGATTTGCAGA-TTTCAGAAAACTATGGGCT  898

seq1  TAGCC-TAAG-ACACATTGCCATTGCACCCTGT  927
      ||||| |||| ||||||||| ||||||||||||
seq2  TAGCCTTAAGAACACATTGCAATTGCACCCTGT  931

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information