BAC Information

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BAC

Clone NameB6Ng01-218C22
Chromosome12 (Build37)
Map Location 49,315,027 - 49,316,189
singlet/doubletsinglet
Overlap genenone
Upstream geneEG664891
Downstream geneGm1818, GA_x5J8B7W54VK-284379-285078, Olfr1399-ps1, EG665036
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218C22.bB6Ng01-218C22.g
ACCGA034381GA034382
length1,1781,155
definitionB6Ng01-218C22.b B6Ng01-218C22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattcg
tctacttgtctgtctctataccagtaccatgcagaattaccacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctaggttttttattattccagatga
atttgcaaattgctccttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatattgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctataatttctttcttcagagacttgaagattttatcatac
agatctttcactttccttagttagagtcacaccgagatattttatattat
tgtgactattgagaagggtgtgtttccctaatttctttctcagcctgttt
atcttgtgtagagaaagccatgactgtttgagttattttatattccagct
acttcacgagctgtttatcagtttaggagttctctgttgatttaaggttc
ccttaattaacctatccattcatctgccaaatcattggactctcttcaat
gatccttgatctcctttggtgccgaaat

gaattcaaagaggttgtaaaacgaaacaaaaggaaaagctcagcctgtat
ggcactcccataaacctagctcatggatttggattgcttctttggggagg
tatgctctttctatggctgagtaaactggcaagtatatgtcaacctgcat
ctccatgcctttatattgtgagcaggagcatctatagggcacatgtgcct
gcaacactaaaccttagagtttcttgagctatagaatgccacagccctgc
agactgtccaaacgaaacttcaaaatgtacattcatttctctaaagttga
ctttaaatagaaaataagaaacctaggatcatgcgagaaattatcagaca
tcaatttaaaatgtttttatattaatttctatggaagatatggatacatt
cttaagtatgtgggaattctgttatcatgtgtactcacacacttgattat
tagtgtccatttcctggtacatcatttacatgtcatatatcctgcttgca
gtgtgacttatgaaatgctcacccaattacagttcagagaatttttgttt
gactagaggacaacacaatttgcaccttgacgatagtctcaaatggaatc
actgtatgaaattaactcctggtaaacactgtttctgtgtagaaaatgag
gactgggaaatggctattttcagaatgatacaaatctgcaaaacaataca
tttcagcttacatgaattgtaatggactttgaaattgtgcaaatagaatt
cagtggcagaattttattcccttggttttggttcaatttcttttagctta
ttctagtttataatcaccatcttacataaagcataatatattcctttgac
gttgtagacataagcctataatcgagtacttatgaatatttgaaaaaaca
cacctataaattatatgaatcctaatcccttttgctaattctataattac
atatgtctcaatcccacaaaaacaaagaatcatgcacttctaccctatat
atttcaacttcgtgcccttaatgatgggaaacaacagacactatatactt
ttgtgtaagaactgtattaagcaggactgatgtgggtggttgttatactt
acaccactctagtgaatgagcagtgatcttaagaggttacatgacactgg
aacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_49315027_49316189
seq2: B6Ng01-218C22.g_65_1219

seq1  GAATTCAAAGAGGTTGTAAAACGAAACAAAAGGAAAAGCTCAGCCTGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGAGGTTGTAAAACGAAACAAAAGGAAAAGCTCAGCCTGTAT  50

seq1  GGCACTCCCATAAACCTAGCTCATGGATTTGGATTGCTTCTTTGGGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTCCCATAAACCTAGCTCATGGATTTGGATTGCTTCTTTGGGGAGG  100

seq1  TATGCTCTTTCTATGGCTGAGTAAACTGGCAAGTATATGTCAACCTGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTCTTTCTATGGCTGAGTAAACTGGCAAGTATATGTCAACCTGCAT  150

seq1  CTCCATGCCTTTATATTGTGAGCAGGAGCATCTATAGGGCACATGTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGCCTTTATATTGTGAGCAGGAGCATCTATAGGGCACATGTGCCT  200

seq1  GCAACACTAAACCTTAGAGTTTCTTGAGCTATAGAATGCCACAGCCCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACACTAAACCTTAGAGTTTCTTGAGCTATAGAATGCCACAGCCCTGC  250

seq1  AGACTGTCCAAACGAAACTTCAAAATGTACATTCATTTCTCTAAAGTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTCCAAACGAAACTTCAAAATGTACATTCATTTCTCTAAAGTTGA  300

seq1  CTTTAAATAGAAAATAAGAAACCTAGGATCATGCGAGAAATTATCAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAATAGAAAATAAGAAACCTAGGATCATGCGAGAAATTATCAGACA  350

seq1  TCAATTTAAAATGTTTTTATATTAATTTCTATGGAAGATATGGATACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTAAAATGTTTTTATATTAATTTCTATGGAAGATATGGATACATT  400

seq1  CTTAAGTATGTGGGAATTCTGTTATCATGTGTACTCACACACTTGATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTATGTGGGAATTCTGTTATCATGTGTACTCACACACTTGATTAT  450

seq1  TAGTGTCCATTTCCTGGTACATCATTTACATGTCATATATCCTGCTTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTCCATTTCCTGGTACATCATTTACATGTCATATATCCTGCTTGCA  500

seq1  GTGTGACTTATGAAATGCTCACCCAATTACAGTTCAGAGAATTTTTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACTTATGAAATGCTCACCCAATTACAGTTCAGAGAATTTTTGTTT  550

seq1  GACTAGAGGACAACACAATTTGCACCTTGACGATAGTCTCAAATGGAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGAGGACAACACAATTTGCACCTTGACGATAGTCTCAAATGGAATC  600

seq1  ACTGTATGAAATTAACTCCTGGTAAACACTGTTTCTGTGTAGAAAATGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATGAAATTAACTCCTGGTAAACACTGTTTCTGTGTAGAAAATGAG  650

seq1  GACTGGGAAATGGCTATTTTCAGAATGATACAAATCTGCAAAACAATACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGAAATGGCTATTTTCAGAATGATACAAATCTGCAAAACAATACA  700

seq1  TTTCAGCTTACATGAATTGTAATGGACTTTGAAATTGTGCAAATAGAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCTTACATGAATTGTAATGGACTTTGAAATTGTGCAAATAGAATT  750

seq1  CAGTGGCAGAATTTTATTCCCTTGGTTTTGGTTCAATTTCTTTTAGCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCAGAATTTTATTCCCTTGGTTTTGGTTCAATTTCTTTTAGCTTA  800

seq1  TTCTAGTTTATAATCACCATCTTACATAAAGCATAATATATTCCTTTGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTTTATAATCACCATCTTACATAAAGCATAATATATTCCTTTGAC  850

seq1  GTTGTAGACATAAGCCTATAATCGAGTACTTATGAATATTTGAAAAAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAGACATAAGCCTATAATCGAGTACTTATGAATATTTGAAAAAACA  900

seq1  CACCTATAAATTATATGAATCCTAATCCCTTTTGCTAATTCTATAATTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTATAAATTATATGAATCCTAATCCCTTTTGCTAATTCTATAATTAC  950

seq1  ATATGTCTCAAATCCCAC-AAAACAAAGAATCATGCACTTCTACCCTATA  999
      ||||||||| |||||||| |||||||||||||||||||||||||||||||
seq2  ATATGTCTC-AATCCCACAAAAACAAAGAATCATGCACTTCTACCCTATA  999

seq1  TATTTCAACTTTCGTGCCCTTAATGAT-GGAAACAACAAGAACACTATAT  1048
      ||||||||| ||||||||||||||||| ||||||||||   |||||||| 
seq2  TATTTCAAC-TTCGTGCCCTTAATGATGGGAAACAACA--GACACTATA-  1045

seq1  TACTTTTGTGTAAGAACTGTAATTTAAGCAAGGGACTGATGT-GGTGGT-  1096
      |||||||||||||||||||||  |||||||  |||||||||| |||||| 
seq2  TACTTTTGTGTAAGAACTGTA--TTAAGCA--GGACTGATGTGGGTGGTT  1091

seq1  -GTATACCTTTACAACACTCTAGTGATAGAGGCAGGTGAATCTTAAGA-G  1144
        |||||  ||||| |||||||||||  || ||| ||| ||||||||| |
seq2  GTTATAC--TTACACCACTCTAGTGAATGA-GCA-GTG-ATCTTAAGAGG  1136

seq1  TAACATGACACTGGGACCT  1163
      | |||||||||||| ||||
seq2  TTACATGACACTGGAACCT  1155


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