BAC Information

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BAC

Clone NameB6Ng01-221B15
Chromosome12 (Build37)
Map Location 62,266,944 - 62,267,765
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665665, Ppia-ps12_475.1
Downstream geneLOC100040300, LOC665677, Nanog-ps2, Lrfn5, LOC665699, LOC665707, LOC100040403, LOC665713
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221B15.bB6Ng01-221B15.g
ACCGA036485GA036486
length705821
definitionB6Ng01-221B15.b B6Ng01-221B15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattcaattcctagccaaatggatggacctggagggtatcatcct
gagtgaggtaacccaatcacaaaggaactctcacaatatgtactcactga
taagtggatattagtccagaaacttaggatacccaagatataagatataa
tttgctaaaaacattaaacccaagagaatgaagaccaaagtgtggacact
ttgccccttcttagaataggaaacaaaacacccatggaaggagttacaga
gacaaaatttggaagtgtgacgaaaggatggaccatctagtgattgccat
atccagagatccatcccatgatcagcttccaaacgctgacaccattgcat
acactagcaagattttgctgaaaggacccagatatagctgtctcttgtga
gactatgccagggcctagcaaacacagaagtggatgctcacagtcagcta
ttggatggaccacagggcccccaatggaggaactagagaaagcacccaag
gaactaaagggaactgcaaccctataggtggaacaacaatatgaactaag
cagtaccctggagctcttgtctctagctgcatatgaatcaaaagatggcc
tagtcggccatcacgcaaagagaggcccattggacttgcaaactttatat
gccccagtacaggggaatgccagggccaaaaagggggagtgggtgggtag
gggag

gaattctttatatgggcaactgtttcataaaggtaaacttactactagtt
gctggtagagtacttacctagatcatctatgattttcatccagtgtaata
caataaaacgaaggagcaggaggaggaggaggaggaaaaaaagaagccct
cagaaaaacaataacaagaaatttaacaattataaatcattaggaatata
gcagatagcaatagcagacccccagaatgtagaaaatggtacataaaaag
aatggcctcaaaacccatacaataaaatgtgtatgtggaggtttactgct
tctactgtattttttcataaatgcacacatctatattaattatatatgaa
agcataaatattatacacaaatttatttgaaagattcagcatggaaaaca
ggaaagtaaggctatatttaatgtattataaaaataaatacacatcataa
tcacttaaatttttctttataaattaacactttagtatttgacaattatt
ttaattttctttatttttaatgattattttatttatttacatttcaaatg
ttactctcttccacaaaccatctatcccgccccctctccttctgcttcta
tgagagtgctaactccatatgccctactcccacctcattgtcctagtatt
ccctgtggagcattaagccttcacaggaccaagggcctctcctcccactg
atgtcccacaaggccatcctctgctacatataccgctggagccattggtc
cctccgtgtgtactctttggttggtggtttaggccctgggagcttggtgg
gggttgtgtgtgttgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_62266944_62267765
seq2: B6Ng01-221B15.g_67_887

seq1  GAATTCTTTATATGGGCAACTGTTTCATAAAGGTAAACTTACTACTAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATATGGGCAACTGTTTCATAAAGGTAAACTTACTACTAGTT  50

seq1  GCTGGTAGAGTACTTACCTAGATCATCTATGATTTTCATCCAGTGTAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTAGAGTACTTACCTAGATCATCTATGATTTTCATCCAGTGTAATA  100

seq1  CAATAAAACGAAGGAGCAGGAGGAGGAGGAGGAGGAAAAAAAGAAGCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAACGAAGGAGCAGGAGGAGGAGGAGGAGGAAAAAAAGAAGCCCT  150

seq1  CAGAAAAACAATAACAAGAAATTTAACAATTATAAATCATTAGGAATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAACAATAACAAGAAATTTAACAATTATAAATCATTAGGAATATA  200

seq1  GCAGATAGCAATAGCAGACCCCCAGAATGTAGAAAATGGTACATAAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATAGCAATAGCAGACCCCCAGAATGTAGAAAATGGTACATAAAAAG  250

seq1  AATGGCCTCAAAACCCATACAATAAAATGTGTATGTGGAGGTTTACTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCTCAAAACCCATACAATAAAATGTGTATGTGGAGGTTTACTGCT  300

seq1  TCTACTGTATTTTTTCATAAATGCACACATCTATATTAATTATATATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGTATTTTTTCATAAATGCACACATCTATATTAATTATATATGAA  350

seq1  AGCATAAATATTATACACAAATTTATTTGAAAGATTCAGCATGGAAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAATATTATACACAAATTTATTTGAAAGATTCAGCATGGAAAACA  400

seq1  GGAAAGTAAGGCTATATTTAATGTATTATAAAAATAAATACACATCATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTAAGGCTATATTTAATGTATTATAAAAATAAATACACATCATAA  450

seq1  TCACTTAAATTTTTCTTTATAAATTAACACTTTAGTATTTGACAATTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTAAATTTTTCTTTATAAATTAACACTTTAGTATTTGACAATTATT  500

seq1  TTAATTTTCTTTATTTTTAATGATTATTTTATTTATTTACATTTCAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTCTTTATTTTTAATGATTATTTTATTTATTTACATTTCAAATG  550

seq1  TTACTCTCTTCCACAAACCATCTATCCCGCCCCCTCTCCTTCTGCTTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTCTTCCACAAACCATCTATCCCGCCCCCTCTCCTTCTGCTTCTA  600

seq1  TGAGAGTGCTAACTCCATATGCCCTACTCCCACCTCATTGTCCTAGTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTGCTAACTCCATATGCCCTACTCCCACCTCATTGTCCTAGTATT  650

seq1  CCCTGTGGAGCATTAAGCCTTCACAGGACCAAGGGCCTCTCCTCCCACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGGAGCATTAAGCCTTCACAGGACCAAGGGCCTCTCCTCCCACTG  700

seq1  ATGTCCCACAAGGCCATCCTCTGCTACATATACCGCTGGAGCCATTGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCACAAGGCCATCCTCTGCTACATATACCGCTGGAGCCATTGGTC  750

seq1  CCTCCGTGTGTACTCTTTGGTTGGTGGTTTAGGCCCTGGGAGCTTGGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCGTGTGTACTCTTTGGTTGGTGGTTTAGGCCCTGGGAGCTTGGTGG  800

seq1  GGGTTGTGTGTGTGTGTGTGTG  822
      ||||||||||||| ||||||||
seq2  GGGTTGTGTGTGT-TGTGTGTG  821


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