BAC Information

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BAC

Clone NameB6Ng01-222J14
Chromosome12 (Build37)
Map Location 59,974,875 - 59,975,952
singlet/doubletsinglet
Overlap genenone
Upstream geneSstr1, Clec14a
Downstream geneLOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33, LOC665628, LOC238199, LOC665639, LOC665644
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222J14.bB6Ng01-222J14.g
ACCGA037574GA037575
length1,2071,081
definitionB6Ng01-222J14.b B6Ng01-222J14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattacaccagagaactcctaaacc
tgataaacagcttcggtgaggtagctggatataaaatacactcaaacaag
tcaatggcctttctctatacaaagattaaaaaggctgggaaagaaattag
gaaacaacacccttctcagtagtcacaaataatataaaatatcttggcgt
gactctaactaaggaagtgaaaggtctgtatgataaaaactacacgtctc
tgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatgc
tcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaagc
aatctacagattcaatgcaatccccatcaaaattccaactcaattcttca
aagaattagaaggagcaatttgcaaatttgtctggaataacaaaaaacct
aggatagcaaaaactcttctcaaggataaaagaacctctggtggaatcac
catgcctgacctaaagctttactacagagcaattgtgataaaaactgcat
ggtactggtatagagacagacaagtagaccaatggaatagaattgaagac
ccagaaatgaacccacacacctatggtcacttgatcttcgacaagggagc
taaaaccatccagtggaagaaagacagcattttcaacaattggtgctggc
acaactggttgtatcatgtagaagatgcgaatcaattccatactatcttc
ctgtactaagtcaaatctaagtgatcaaggacttcacataaaacagagac
actgaaacttatagaggagaaagtggggaaggcttgagatatggcacagg
ggaaatcctgaacagaacagcaatgctggtgctgtagatcagaatgacat
ggactatgaactcaaggtcttgcaggcatatagaacctgcgtccatagag
cacttga
gaattccctagccctgggtagttgctaggtttcatcacctagcatgattt
cctttttgttggatgaggttgtttgattcttacaggtttacaaaaatgtc
gtaattgattttaaattttgcaacagctctgagcagtccaacattgacct
aacatatgaaatgtaacagttctgtaaggactaatgcggtgtaccttgta
gaccgagctcctgagattaaacatctttaggaacgctaattaattccaga
aaaaagatcagctggagagtcttttcatctaagaaagcttaaatagccac
aataatattttatttacagagcatagccataaactctaagatttctgtga
aaggaaatgaaccaggcacagaaattggtgcaggtggggtgattgtttct
ccagcaaggcagaactgggtctccagctgagaatttcataaaagtaatga
agattatacagatgtgtgtgatacttattattctaaatgggccatgtatt
cagggatgctgaagaattttaatggaatctgctatcaccataaactcaga
ttcattgacttctttccttcctgtctccctccttcctttcattttttctt
ccttccctcttcctttcctacatgaggcatagagggaatttaatttaata
atgatatgatgcctttagaatccaatacaatgaatggtctcatgccccag
cagaacctgtcagattaaccctggggtgggtgaattagttgccaattctt
cctgagcataacttaaaataaaaaagtatcattggccatcattcctggga
gggcttattctgggtactttttttggactggattgagagtatttagatag
ccagtgaggtattcttcatttgcttcatttgctcttctttcatttgctgg
taggcactggggcttgtattgctactgctgaaagacaagttgcagggcgg
cttgccatttgagaaggaagaatgattggccttgccccagtgtgcatgtt
gaggagtttcttgagggacctacctgaactgattggagagcgtgccctcc
aatgtgagtgtcaccatgtgaatcagttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_59974875_59975952
seq2: B6Ng01-222J14.g_68_1148 (reverse)

seq1  CCCAACTGA-TCACATGGTGCCCACTCACA-TGGAGGGCACCGCTTCTCC  48
      ||||||||| ||||||||||  |||||||| ||||||||| ||| |||||
seq2  CCCAACTGATTCACATGGTG-ACACTCACATTGGAGGGCA-CGC-TCTCC  47

seq1  AATCAGTTCAGGTTAGGTTCCCTC-AGAAACTCCTTCACATGCACACCTG  97
      |||||||||||| |||| |||||| ||||||||||  ||||||||| |||
seq2  AATCAGTTCAGG-TAGG-TCCCTCAAGAAACTCCTCAACATGCACA-CTG  94

seq1  GGGCAA-GCCAATCATTCTTTCCTCTCAAATGCCAAGCCG-CCTGC-ACT  144
      |||||| ||||||||||||| | ||||||||| ||||||| ||||| |||
seq2  GGGCAAGGCCAATCATTCTTCCTTCTCAAATGGCAAGCCGCCCTGCAACT  144

seq1  TGTCTTTCAGCAGTAGCAATACAAG-CCCAGTGCCTACCAGCAAATG-AA  192
      ||||||||||||||||||||||||| ||||||||||||||||||||| ||
seq2  TGTCTTTCAGCAGTAGCAATACAAGCCCCAGTGCCTACCAGCAAATGAAA  194

seq1  GAAGAGCAAATGAAGCAAATGAAGAATACCTCACTGGCTATCTAAATACT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCAAATGAAGCAAATGAAGAATACCTCACTGGCTATCTAAATACT  244

seq1  CTCAATCCAGTCC-AAAAAAGTACCCAGAATAAGCCCTCCCAGGAATGAT  291
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTCAATCCAGTCCAAAAAAAGTACCCAGAATAAGCCCTCCCAGGAATGAT  294

seq1  GGCCAATGATACTTTTTTATTTTAAGTTATGCTCAGGAAGAATTGGCAAC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAATGATACTTTTTTATTTTAAGTTATGCTCAGGAAGAATTGGCAAC  344

seq1  TAATTCACCCACCCCAGGGTTAATCTGACAGGTTCTGCTGGGGCATGAGA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCACCCACCCCAGGGTTAATCTGACAGGTTCTGCTGGGGCATGAGA  394

seq1  CCATTCATTGTATTGGATTCTAAAGGCATCATATCATTATTAAATTAAAT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCATTGTATTGGATTCTAAAGGCATCATATCATTATTAAATTAAAT  444

seq1  TCCCTCTATGCCTCATGTAGGAAAGGAAGAGGGAAGGAAGAAAAAATGAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTATGCCTCATGTAGGAAAGGAAGAGGGAAGGAAGAAAAAATGAA  494

seq1  AGGAAGGAGGGAGACAGGAAGGAAAGAAGTCAATGAATCTGAGTTTATGG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAGGGAGACAGGAAGGAAAGAAGTCAATGAATCTGAGTTTATGG  544

seq1  TGATAGCAGATTCCATTAAAATTCTTCAGCATCCCTGAATACATGGCCCA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGCAGATTCCATTAAAATTCTTCAGCATCCCTGAATACATGGCCCA  594

seq1  TTTAGAATAATAAGTATCACACACATCTGTATAATCTTCATTACTTTTAT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAATAATAAGTATCACACACATCTGTATAATCTTCATTACTTTTAT  644

seq1  GAAATTCTCAGCTGGAGACCCAGTTCTGCCTTGCTGGAGAAACAATCACC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCTCAGCTGGAGACCCAGTTCTGCCTTGCTGGAGAAACAATCACC  694

seq1  CCACCTGCACCAATTTCTGTGCCTGGTTCATTTCCTTTCACAGAAATCTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGCACCAATTTCTGTGCCTGGTTCATTTCCTTTCACAGAAATCTT  744

seq1  AGAGTTTATGGCTATGCTCTGTAAATAAAATATTATTGTGGCTATTTAAG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTATGGCTATGCTCTGTAAATAAAATATTATTGTGGCTATTTAAG  794

seq1  CTTTCTTAGATGAAAAGACTCTCCAGCTGATCTTTTTTCTGGAATTAATT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTAGATGAAAAGACTCTCCAGCTGATCTTTTTTCTGGAATTAATT  844

seq1  AGCGTTCCTAAAGATGTTTAATCTCAGGAGCTCGGTCTACAAGGTACACC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTTCCTAAAGATGTTTAATCTCAGGAGCTCGGTCTACAAGGTACACC  894

seq1  GCATTAGTCCTTACAGAACTGTTACATTTCATATGTTAGGTCAATGTTGG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAGTCCTTACAGAACTGTTACATTTCATATGTTAGGTCAATGTTGG  944

seq1  ACTGCTCAGAGCTGTTGCAAAATTTAAAATCAATTACGACATTTTTGTAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCAGAGCTGTTGCAAAATTTAAAATCAATTACGACATTTTTGTAA  994

seq1  ACCTGTAAGAATCAAACAACCTCATCCAACAAAAAGGAAATCATGCTAGG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTAAGAATCAAACAACCTCATCCAACAAAAAGGAAATCATGCTAGG  1044

seq1  TGATGAAACCTAGCAACTACCCAGGGCTAGGGAATTC  1078
      |||||||||||||||||||||||||||||||||||||
seq2  TGATGAAACCTAGCAACTACCCAGGGCTAGGGAATTC  1081