BAC Information

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BAC

Clone NameB6Ng01-222O15
Chromosome12 (Build37)
Map Location 100,109,026 - 100,110,225
singlet/doubletsinglet
Overlap geneEml5
Upstream geneLOC100039770, LOC667746, Galc, Gpr65, Kcnk10, Spata7, Ptpn21, Zc3h14
Downstream geneLOC100039845, Ttc8, EG667779, Ches1, LOC100039892, 2610021K21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222O15.bB6Ng01-222O15.g
ACCGA037800GA037801
length1,1961,111
definitionB6Ng01-222O15.b B6Ng01-222O15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatctacatttacagcagcacaccgaattggctcttccatatta
catcttgctattaaagcatgatctacaaggctccaaatcctgtataattt
aattcaaaaataaaaataattaatgtctactgtaaaaattatctctgtaa
gaatatttcaagataaaataatctaatttaaaggaagacatttgtctcta
tgaaaacagcaatattacttatgattaaaatgaaagagtatcagattttt
tttgtttttaaagtaatatagcagggatggcaagatggttccaaaggtaa
aagtgcttgtagcccagtccccaaaacccataatggaaggagagaggcag
cttcccaaagtagtcctgacttccgtgcatgtcacggcactcacaaaccc
acatgcctgctctcacatacacagccaggaacagtttgttgttgttgttt
tttaaatataaaaacatactgacatcactatgacccaattgttaatctga
aataggttagtaatctctaccctaatcaaaaaagagctatttccttaaat
tatatatgtaagactgggcatggtattatatgcctttaagcccagcatta
gagaggcagaggcaggcagatctctgagttggtggccagcctgatctaca
aacaagtgccaggtcagccagagttacatagtgagaccctttcgcaaaaa
aaagtatctatgtaggctttcaaatggagtacttaaaatattcaaattca
caaactattccagactatttgaagaacaaggattatgatttcaaataact
taaacaaagaaaaataccaatgaaaatctaacatattcaagtaagttata
acaaaacttcacatcaaaacttgtgaacctgagagtagaaagctgtctct
gcttctaagagagcacaggtctttcagaggagccgagttaagatcccagc
acacacacaggtagcctgaaaccagctataacttcagatccaagggatcc
aataccctctctcaccttcactgcatacttaataccacatgagcatacac
atgcacacacacatataaatatcaaatcataaagtatccctggtgtcaat
acgggaaatatgtagggactatttagctacatatgttataaaactatcag
ctatatttaccgaatagcatctggttcagagttagaaaagatcagc
gaattctgtgagtctgtgctttcatctttattttgctgtgaaatagaaga
aacaatgccacttcccttatggagtcagtgcaagaattaaaacacatagc
acacgctaagcacagaatctggcactaagagaatgctcaaatcaaggttg
agattatggttgccatagctgcctaagatctcacttaatcaaagagatgt
ggccagcaccaaccctgagctttggcagctagagaggcagcgaggtaatt
agatgtggacaagatggtagaagctgacgaatagaaagcagagctcagaa
tgtcaccagattagggaggttgctccttaccacactatcatgacacagaa
acttaatattatttattatagcttaggccttagctgactacctcccaggt
agctcatctggctttaattaacccaactattctattccacgtctgccgtg
tggtccattacctccagcacctgttccttccacctctgtgtcatggtggt
gaatcttgagcttctgaattcttcccacagttcctgcctctgcccagaaa
tcccgtctttcttctcctgcctcagctattggctgtcagatctttattaa
accaatcaggtgagggaggtgtgtgtttacaaaataccaaagtaggtgat
gatccatagaaataacaacgctatttcttgtagataagataaaatttggg
ttggtgggttggtgtctctatcgtgccaccaggctacctgcctggcctct
tcaggttccatatgcccaataatgtgaatgacagctaatgtcacccccat
tgattcttgtgtgcccttcattatcacagatctctatttcgtccaggaga
tggctccctgtctacaaaaaaaaaaaaaaaaaaaaaaaaataaaaaaaaa
gccagggacaagggattggggcgaagagtgagggaagtggcccaaccaaa
tacccagtcccaactggagacccattcccatgggtcaagcaacaaatccc
tgaacactataaatatactctgttattgccctgcaaacttatcataaact
tttcctctggaaggctcttaaccagccagctaaactcaacaatgtcaaaa
tatctaaagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_100109026_100110225
seq2: B6Ng01-222O15.b_43_1238

seq1  GAATTCCATCTACATTTACAGCAGCACACCGAATTGGCTCTTCCATATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTACATTTACAGCAGCACACCGAATTGGCTCTTCCATATTA  50

seq1  CATCTTGCTATTAAAGCATGATCTACAAGGCTCCAAATCCTGTATAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGCTATTAAAGCATGATCTACAAGGCTCCAAATCCTGTATAATTT  100

seq1  AATTCAAAAATAAAAATAATTAATGTCTACTGTAAAAATTATCTCTGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAAAATAAAAATAATTAATGTCTACTGTAAAAATTATCTCTGTAA  150

seq1  GAATATTTCAAGATAAAATAATCTAATTTAAAGGAAGACATTTGTCTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTCAAGATAAAATAATCTAATTTAAAGGAAGACATTTGTCTCTA  200

seq1  TGAAAACAGCAATATTACTTATGATTAAAATGAAAGAGTATCAGATTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAGCAATATTACTTATGATTAAAATGAAAGAGTATCAGATTTTT  250

seq1  TTTGTTTTTAAAGTAATATAGCAGGGATGGCAAGATGGTTCCAAAGGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTAAAGTAATATAGCAGGGATGGCAAGATGGTTCCAAAGGTAA  300

seq1  AAGTGCTTGTAGCCCAGTCCCCAAAACCCATAATGGAAGGAGAGAGGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTTGTAGCCCAGTCCCCAAAACCCATAATGGAAGGAGAGAGGCAG  350

seq1  CTTCCCAAAGTAGTCCTGACTTCCGTGCATGTCACGGCACTCACAAACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAAAGTAGTCCTGACTTCCGTGCATGTCACGGCACTCACAAACCC  400

seq1  ACATGCCTGCTCTCACATACACAGCCAGGAACAGTTTGTTGTTGTTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCTGCTCTCACATACACAGCCAGGAACAGTTTGTTGTTGTTGTTT  450

seq1  TTTAAATATAAAAACATACTGACATCACTATGACCCAATTGTTAATCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATATAAAAACATACTGACATCACTATGACCCAATTGTTAATCTGA  500

seq1  AATAGGTTAGTAATCTCTACCCTAATCAAAAAAGAGCTATTTCCTTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGTTAGTAATCTCTACCCTAATCAAAAAAGAGCTATTTCCTTAAAT  550

seq1  TATATATGTAAGACTGGGCATGGTATTATATGCCTTTAAGCCCAGCATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGTAAGACTGGGCATGGTATTATATGCCTTTAAGCCCAGCATTA  600

seq1  GAGAGGCAGAGGCAGGCAGATCTCTGAGTTGGTGGCCAGCCTGATCTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCAGAGGCAGGCAGATCTCTGAGTTGGTGGCCAGCCTGATCTACA  650

seq1  AACAAGTGCCAGGTCAGCCAGAGTTACATAGTGAGACCCTTTCGCAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTGCCAGGTCAGCCAGAGTTACATAGTGAGACCCTTTCGCAAAAA  700

seq1  AAAGTATCTATGTAGGCTTTCAAATGGAGTACTTAAAATATTCAAATTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATCTATGTAGGCTTTCAAATGGAGTACTTAAAATATTCAAATTCA  750

seq1  CAAACTATTCCAGACTATTTGAAGAACAAGGATTATGATTTCAAATAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTATTCCAGACTATTTGAAGAACAAGGATTATGATTTCAAATAACT  800

seq1  TAAACAAAGAAAAATACCAATGAAAATCTAACATATTCAAGTAAGTTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAAGAAAAATACCAATGAAAATCTAACATATTCAAGTAAGTTATA  850

seq1  ACAAAACTTCACATCAAAACTTGTGAACCTGAGAGTAGAAAGCTGTCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACTTCACATCAAAACTTGTGAACCTGAGAGTAGAAAGCTGTCTCT  900

seq1  GCTTCTAAGAGAGCACAGGTCTTTCAGAGGAGCCGAGTTAAGATCCCAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTAAGAGAGCACAGGTCTTTCAGAGGAGCCGAGTTAAGATCCCAGC  950

seq1  ACACACACAGGTAGCCTGAAACCAGCTATAACTTCAGATCCAAGGGATCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACAGGTAGCCTGAAACCAGCTATAACTTCAGATCCAAGGGATCC  1000

seq1  AATACCCTCTTCTCACCTTCACTGCATACTTAATA-CACATGAGGCATAC  1049
      ||||||||| ||||||||||||||||||||||||| ||||||| ||||||
seq2  AATACCCTC-TCTCACCTTCACTGCATACTTAATACCACATGA-GCATAC  1048

seq1  ACATGCACACACACATATAAATAATCAAATCATAAAGTATCACT-GTGTC  1098
      |||||||||||||||||||||| |||||||||||||||||| || |||||
seq2  ACATGCACACACACATATAAAT-ATCAAATCATAAAGTATCCCTGGTGTC  1097

seq1  AATAC-GGAAATATGTAGGGACTATTTAGCTACATATGTTATAAAACTA-  1146
      ||||| ||||||||||||||||||||||||||||||||||||||||||| 
seq2  AATACGGGAAATATGTAGGGACTATTTAGCTACATATGTTATAAAACTAT  1147

seq1  CAGCTATAATTTAACGAATAAGCATCTGTTTCAAGAGGTTAGAAAAAGAT  1196
      ||||||| ||||| ||||| |||||||| ||| ||| ||||| |||||||
seq2  CAGCTAT-ATTTACCGAAT-AGCATCTGGTTC-AGA-GTTAG-AAAAGAT  1192

seq1  CAGC  1200
      ||||
seq2  CAGC  1196