BAC Information

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BAC

Clone NameB6Ng01-224A12
Chromosome12 (Build37)
Map Location 52,795,292 - 52,796,288
singlet/doubletsinglet
Overlap geneAp4s1
Upstream geneLOC100039517, LOC636070, LOC100039525, 6030408C04Rik, Scfd1, LOC620390, LOC100039578, Coch, Strn3
Downstream geneHectd1, EG544864, LOC100039476, Heatr5a, LOC676784, 6530401N04Rik, Gpr33, LOC100039627, Nubpl, Arhgap5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224A12.bB6Ng01-224A12.g
ACCGA038611GA038612
length421999
definitionB6Ng01-224A12.b B6Ng01-224A12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aatgaattctttgccttgagaacgtggaaaggccagcacttgattgctgc
gttgtaaatgctaattacctgctcctttcccaagtacttcctaccggaaa
gtaggcaaaagctttctccttaatcaaagcctattctgagccttttcagc
taagctttgatgcttggacttctgcatctttgctttatattgtttagttt
tagcaacccctccccccccccgcccccactctgccactaccccgccagtc
cctcccccatgtcttacccatccacctggactcccttctctaagaaagca
gttgagtgcgtttaaccagaatcctccctttcctcgatgcttccagtctg
atttctcatctgtcagcctccaccctggtccttaggtttgtttggtttgg
gttgggttggttggttggttg
gaattctctctctgaccccttgctgagtcatttcctctcttcagtcccct
ttgaaacttcctatttatcctgtcctctcacctgtcactcctccctgctc
ctgcctagattctccttctttcagaatgatttggggtaggtggagggtaa
aatggtgtgctgcccttgagtgtgagattctcctgtttctgccacccaag
tgctgggattgcaaatggacttcagcttgctcagttcatgatgatcttca
tgaaagtctatgtatggctgctcggtactttctgcactggggaggctgag
ccagaattattgctgagagtctgaaccctgagtcatgtgaagaattctag
gctagactaaagtacacagtgagaccttgttttgttgttgtttggtttga
tttggttaaaaaaacaatgcctatatttttgatcagcttagtttttaggg
cactactttgttttctatccttacaagtaatatttgaaccaatatgctta
ctcagctggacttgtcgtatttaatttacatgaattatgaaagccaaagt
ataccaaagaattccaggcttttaagtaagttgggaatagacaatactca
gataccttcttatcagttatttcaaatgtgactatgaaaagcttgtactc
cactctgcctttgagaaccaagtagctacttgtgattatctaagcacttt
gtctttggtgacctgtcatcttcccactgaaagaactcaagcaggttcat
aaatactattttagttgttgttttttcctcatcttaaagggtatgacaag
aattctttgttttcatggctgggagaacaagtcacacacagctcttggtg
acttcagcaagttccattgtaataataggaagttggtccccaccccttca
tatcagtgagcgtgtgtgcatttggaaacaaggaaataaaatctcccttc
acaatttgcctactgtcttttgatagctcatattcatcattagcatgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_52795292_52796288
seq2: B6Ng01-224A12.g_69_1067

seq1  GAATTCTCTCTCTGACCCCTTGCTGAGTCATTTCCTCTCTTCAGTCCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCTGACCCCTTGCTGAGTCATTTCCTCTCTTCAGTCCCCT  50

seq1  TTGAAACTTCCTATTTATCCTGTCCTCTCACCTGTCACTCCTCCCTGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACTTCCTATTTATCCTGTCCTCTCACCTGTCACTCCTCCCTGCTC  100

seq1  CTGCCTAGATTCTCCTTCTTTCAGAATGATTTGGGGTAGGTGGAGGGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTAGATTCTCCTTCTTTCAGAATGATTTGGGGTAGGTGGAGGGTAA  150

seq1  AATGGTGTGCTGCCCTTGAGTGTGAGATTCTCCTGTTTCTGCCACCCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTGTGCTGCCCTTGAGTGTGAGATTCTCCTGTTTCTGCCACCCAAG  200

seq1  TGCTGGGATTGCAAATGGACTTCAGCTTGCTCAGTTCATGATGATCTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGATTGCAAATGGACTTCAGCTTGCTCAGTTCATGATGATCTTCA  250

seq1  TGAAAGTCTATGTATGGCTGCTCGGTACTTTCTGCACTGGGGAGGCTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTCTATGTATGGCTGCTCGGTACTTTCTGCACTGGGGAGGCTGAG  300

seq1  CCAGAATTATTGCTGAGAGTCTGAACCCTGAGTCATGTGAAGAATTCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATTATTGCTGAGAGTCTGAACCCTGAGTCATGTGAAGAATTCTAG  350

seq1  GCTAGACTAAAGTACACAGTGAGACCTTGTTTTGTTGTTGTTTGGTTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGACTAAAGTACACAGTGAGACCTTGTTTTGTTGTTGTTTGGTTTGA  400

seq1  TTTGGTTAAAAAAACAATGCCTATATTTTTGATCAGCTTAGTTTTTAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTAAAAAAACAATGCCTATATTTTTGATCAGCTTAGTTTTTAGGG  450

seq1  CACTACTTTGTTTTCTATCCTTACAAGTAATATTTGAACCAATATGCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACTTTGTTTTCTATCCTTACAAGTAATATTTGAACCAATATGCTTA  500

seq1  CTCAGCTGGACTTGTCGTATTTAATTTACATGAATTATGAAAGCCAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTGGACTTGTCGTATTTAATTTACATGAATTATGAAAGCCAAAGT  550

seq1  ATACCAAAGAATTCCAGGCTTTTAAGTAAGTTGGGAATAGACAATACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAAGAATTCCAGGCTTTTAAGTAAGTTGGGAATAGACAATACTCA  600

seq1  GATACCTTCTTATCAGTTATTTCAAATGTGACTATGAAAAGCTTGTACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCTTCTTATCAGTTATTTCAAATGTGACTATGAAAAGCTTGTACTC  650

seq1  CACTCTGCCTTTGAGAACCAAGTAGCTACTTGTGATTATCTAAGCACTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGCCTTTGAGAACCAAGTAGCTACTTGTGATTATCTAAGCACTTT  700

seq1  GTC-TTGGTGACCTGTCATCTTCCCACTG-AAGAACTCAAGCAGGTTCAT  748
      ||| ||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTCTTTGGTGACCTGTCATCTTCCCACTGAAAGAACTCAAGCAGGTTCAT  750

seq1  AAATACTATTTTAGTTGTTG-TTTTTCCTCATCTTAAAGGGTATGACAAG  797
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAATACTATTTTAGTTGTTGTTTTTTCCTCATCTTAAAGGGTATGACAAG  800

seq1  AATTC-TTGTTTTCATGGCTGGGAGAACAAGTCACAACACAGCTCTTGGT  846
      ||||| ||||||||||||||||||||||||||||| ||||||||||||||
seq2  AATTCTTTGTTTTCATGGCTGGGAGAACAAGTCAC-ACACAGCTCTTGGT  849

seq1  GACTTCAGCAAGTTCCATTGT-ATAATAGGAAG-TGGTCCCCACCCCTTC  894
      ||||||||||||||||||||| ||||||||||| ||||||||||||||||
seq2  GACTTCAGCAAGTTCCATTGTAATAATAGGAAGTTGGTCCCCACCCCTTC  899

seq1  ATATCAGTGAGCGTGTGTGCATTGGGAAACAAGGAAATAAAATCTCCCTT  944
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATATCAGTGAGCGTGTGTGCATTTGGAAACAAGGAAATAAAATCTCCCTT  949

seq1  CACAATTTGCCTACTGTCCTTTGATTAGGCTCAGTATTCATCATTAGCAT  994
      |||||||||||||||||| ||||||   ||||| ||||||||||||||||
seq2  CACAATTTGCCTACTGTCTTTTGAT--AGCTCA-TATTCATCATTAGCAT  996

seq1  GTT  997
      |||
seq2  GTT  999