BAC Information

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BAC

Clone NameB6Ng01-224G21
Chromosome12 (Build37)
Map Location 14,044,391 - 14,045,549
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC628449, Ddx1, LOC627199, LOC627189, LOC100043243, LOC100042396, LOC238091, EG633789, LOC668481
Downstream geneAW125753, LOC100043256, Map1lc3-ps7, LOC668492
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224G21.bB6Ng01-224G21.g
ACCGA038894GA038895
length1,1911,150
definitionB6Ng01-224G21.b B6Ng01-224G21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
attcctggtactataaacctaaatatgcccaaaactcatggctaggaaca
tcataagccctagggaagaaactatttgtattgtttatctaaagtacaac
atggtattgtcaaactcctttctaaatatttgtttctatactcagccatt
ttttctatactcagccatttttgctacttctaagcaataggcagtggtta
atacagagacactttactattcaaagtgataaaaatattaagcaaaaagt
gtgtgctaagctgacaatatgacagttatatcaatcctttccccttcaaa
gctcagggaacattgaggaaagccagaaaaatggaagagccagaatccag
aatagtgggcagaattcatggcaaggttgtgttttacatacaacatttcc
attgcatatttgaactcacagcacctgtggctacccacacaagattggtg
caagataaagtgggttaaaaatttcagcttaaatggtctgctaaaagaag
ctgctattggcaatagttgggggggcatagtcacttttctttagcagtgt
agagactggtagattcctcatgcccttatggatggcctaatacctgtatt
catatgaatggcactaattggactctctgaggttaatttattaattagaa
tgagatctgtgcaaggaagcaggaacatcattacccttaatccactacag
cctagaatatagctaattatcagagtatcattattttttaattctatagt
gtctaagaagaaaagcatacattaaaggcattgactggcatggaagatct
gaatgagatttctaaaatagtcacacctttctgatgaatttttaatagtt
tagagggatcgaaatattttattctctttactcaacataatagtctatca
tcggtcattactatgtaaaagtctatttgtagggtaagtttgaccctaaa
atagcttagaaggaagatttatatgttgcagagccaaagcccttttgccg
ttgaactatacaatttagcatgctatcaagccacataatttaccaatcag
tttaccatacacctgtaagaacaggatctttgaatggatggtccatgtaa
gatggttctattaggacctaagttcactggaataagtccaatagtagaaa
agattgtgcacaattattgtagggttttcattgggaagtgc
gaattcaggtctaagtacacacacactgtgatagattttaaggctcagtg
cctggggctccagatcaataacattccctgtggctggaggcctgtgagat
gtattctcatgccaaccataccctctctgtgagaagcaaatggtattgtc
tcagagcaccagagaaaacatccatgctgggaaacccacagcctccagca
agtctctaagaggtaagaaggtttggggacatgtcccttttatgagctag
gagagtaatgcaagaaacactgagatgtaggacagggtggtggtagcctg
agaaacttcaggaggtataaatgaccacagatgcacatgatatttgatag
aacttttattattggatttacaaaacaagcaaacaaataaacaaataacc
cttaacattaaaaccaggtgcctggataaagcaacccatgcttgctaatt
agtatatctttgatggaggttacatacctctgtagagtgagccagctgat
gcttcctcatacaaaatacctagtgttaaagcaaaatttgaatcctgcaa
ttgctgaagtgataaatggttgtaaactgacattagattaacgactattt
tcagagcgcagtgaattcagcatgcataaccttagataaagccactatgc
tttccagaaattatggaaccagatagcatttccttaaagaatctacagct
tgttttctatggctctttatattgtagatttttctcatttctaattaacc
tttgcaccccaactgcctaggacaatgacagtggcatactttagacaatc
aatgattgaatgaataaaaggttgaagactcttgtgagatgaaaatttcc
cttttaaaaattttaatttggtttaatttgttatgagttacatgatctct
tctttaaaaaaaattgggagtgaaaatagtgattttctttcttcctgaat
taatattgaaggaggcctgtagcaagtcttcagtattagtatgtcaagat
cattatctgtctctggagatcatgttcagggcctaaaataaagttctctt
aagcctggtgcctccagcctctgcttattgtccatttgccaaggcacttt
gtacccattctgtcttctggattcctatgtagtgtttttaaccatcacca

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_14044391_14045549
seq2: B6Ng01-224G21.g_67_1216

seq1  GAATTCAGGTCTAAGTACACACACACTGTGATAGATTTTAAGGCTCAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCTAAGTACACACACACTGTGATAGATTTTAAGGCTCAGTG  50

seq1  CCTGGGGCTCCAGATCAATAACATTCCCTGTGGCTGGAGGCCTGTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGCTCCAGATCAATAACATTCCCTGTGGCTGGAGGCCTGTGAGAT  100

seq1  GTATTCTCATGCCAACCATACCCTCTCTGTGAGAAGCAAATGGTATTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTCATGCCAACCATACCCTCTCTGTGAGAAGCAAATGGTATTGTC  150

seq1  TCAGAGCACCAGAGAAAACATCCATGCTGGGAAACCCACAGCCTCCAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCACCAGAGAAAACATCCATGCTGGGAAACCCACAGCCTCCAGCA  200

seq1  AGTCTCTAAGAGGTAAGAAGGTTTGGGGACATGTCCCTTTTATGAGCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTAAGAGGTAAGAAGGTTTGGGGACATGTCCCTTTTATGAGCTAG  250

seq1  GAGAGTAATGCAAGAAACACTGAGATGTAGGACAGGGTGGTGGTAGCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTAATGCAAGAAACACTGAGATGTAGGACAGGGTGGTGGTAGCCTG  300

seq1  AGAAACTTCAGGAGGTATAAATGACCACAGATGCACATGATATTTGATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTTCAGGAGGTATAAATGACCACAGATGCACATGATATTTGATAG  350

seq1  AACTTTTATTATTGGATTTACAAAACAAGCAAACAAATAAACAAATAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTATTATTGGATTTACAAAACAAGCAAACAAATAAACAAATAACC  400

seq1  CTTAACATTAAAACCAGGTGCCTGGATAAAGCAACCCATGCTTGCTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACATTAAAACCAGGTGCCTGGATAAAGCAACCCATGCTTGCTAATT  450

seq1  AGTATATCTTTGATGGAGGTTACATACCTCTGTAGAGTGAGCCAGCTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATCTTTGATGGAGGTTACATACCTCTGTAGAGTGAGCCAGCTGAT  500

seq1  GCTTCCTCATACAAAATACCTAGTGTTAAAGCAAAATTTGAATCCTGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTCATACAAAATACCTAGTGTTAAAGCAAAATTTGAATCCTGCAA  550

seq1  TTGCTGAAGTGATAAATGGTTGTAAACTGACATTAGATTAACGACTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAAGTGATAAATGGTTGTAAACTGACATTAGATTAACGACTATTT  600

seq1  TCAGAGCGCAGTGAATTCAGCATGCATAACCTTAGATAAAGCCACTATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCGCAGTGAATTCAGCATGCATAACCTTAGATAAAGCCACTATGC  650

seq1  TTTCCAGAAATTATGGAACCAGATAGCATTTCCTTAAAGAATCTACAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGAAATTATGGAACCAGATAGCATTTCCTTAAAGAATCTACAGCT  700

seq1  TGTTTTCTATGGCTCTTTATATTGTAGATTTTTCTCATTTCTAATTAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTATGGCTCTTTATATTGTAGATTTTTCTCATTTCTAATTAACC  750

seq1  TTTGCACCCCAACTGCCTAGGACAATGACAGTGGCATACTTTAGACAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACCCCAACTGCCTAGGACAATGACAGTGGCATACTTTAGACAATC  800

seq1  AATGATTGAATGAATAAAAGGTTGAAGACTCTTGTGAGATGAAAATTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTGAATGAATAAAAGGTTGAAGACTCTTGTGAGATGAAAATTTCC  850

seq1  CTTTTAAAAAATTTTAATTTGGTTTAATTTGTTATGAGTTAACATGATCT  900
      ||||| |||||||||||||||||||||||||||||||||| |||||||||
seq2  CTTTT-AAAAATTTTAATTTGGTTTAATTTGTTATGAGTT-ACATGATCT  898

seq1  CTTCTTTAAAAAAAATTTGGAGTTGAAAAATAGTGATTTTCTTTCTTCTT  950
      ||||||||||||||||| |||||   |||||||||||||||||||||| |
seq2  CTTCTTTAAAAAAAATTGGGAGT--GAAAATAGTGATTTTCTTTCTTCCT  946

seq1  GAAATTAAATATTGAAAGGAGGCCTGTAGCAAAGTCTTCAGTATTAGTAT  1000
      |||  | ||||||| ||||||||||||||| |||||||||||||||||||
seq2  GAA--TTAATATTG-AAGGAGGCCTGTAGC-AAGTCTTCAGTATTAGTAT  992

seq1  GTCAAGATCATTATCTGTTCTCT-GAGATCATGTTCAGGGGCCTAAAATA  1049
      ||||||||||||||||| ||||| ||||||||||||| ||||||||||||
seq2  GTCAAGATCATTATCTG-TCTCTGGAGATCATGTTCA-GGGCCTAAAATA  1040

seq1  AAG-TCTCTTAAGCTGTGTG-CTCCAGCCTCTGCCTTTATTGTCCCATTG  1097
      ||| ||||||||||   ||| |||||||||||||  |||||||||  |||
seq2  AAGTTCTCTTAAGCCTGGTGCCTCCAGCCTCTGC--TTATTGTCCATTTG  1088

seq1  CCCAGGCACTTTTGTCCCA-TCTGTCTTTTCTGATT-CTATGTAGTTGTT  1145
      || |||||||||   |||| |||||||| |  |||| |||||||| ||||
seq2  CCAAGGCACTTTGTACCCATTCTGTCTTCT-GGATTCCTATGTAG-TGTT  1136

seq1  TTTAACATTCACCA  1159
      ||||||  ||||||
seq2  TTTAACCATCACCA  1150