BAC Information

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BAC

Clone NameB6Ng01-227G06
Chromosome12 (Build37)
Map Location 59,771,062 - 59,772,219
singlet/doubletsinglet
Overlap genenone
Upstream geneSstr1, Clec14a
Downstream geneLOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33, LOC665628, LOC238199, LOC665639, LOC665644
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227G06.bB6Ng01-227G06.g
ACCGA041073GA041074
length1,1531,104
definitionB6Ng01-227G06.b B6Ng01-227G06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataacagtctcattatgtcacagatgaagaaactgaggcgtgaa
gcaattaaataggttgcccaatgccagcatttaaagattgggtgactaga
attctaatccaggctctgactctcatacacttttcattttgttagaaatg
gaaggaaccaaagtgcatgaagataattttagcctaggtgagaccaggga
ccatattgttctagttgttagcatccagaatcactagccctcagtgctct
cagcccctgttctacagccatgatgagcaagtgacataatgacgagccat
actgaaatggctactttgtttactctcagccaccataggatgccaggtaa
tgctagcatgctaattaatcctgcccatctggctaatgcagtcttgataa
tttataatccaaagcctttgggcacaaagacctattaacatgctaatata
ccttctgactattctagtagcttttcaattagtaattatctatagactga
gccaatgagaggaaatttttttcaagtgattagcaccttggaaatcatga
ccagtctggtttctgactaacattctttggttttggcagttagcatttct
cattccagaaaattactctggtgagttcagttgatggcttggggccatga
aaactcaaacctatttgatggccaattactattttgagaaaatagaatta
taacttattggtataagtacttgatttgcttaacaaaatattataacaga
atacttattctggttctaaaaggcactccagaactgtaaaaatatagtat
ggatgtatattaggttaatattgttaaatgtctagtggttgtcttagatg
taacaatggtgttatggcttacaagactgatgttggcatatttagggata
aatattatgatatctgaaactaacaatcaaatggctggagacctaattaa
gatagataggacaaggacacgcaattatggtgaagcataaagtattttct
attttgtgaaagaagatatgtgggttcacttgatgcgaaaaactttacta
caaataatttattctccagaaactatcatatacaaagcataattacttta
aaatctgtattgtattctgatctctctacctcctgtgcctcagctcttcc
cct

gaattctttgtttaacgctgtaccccatttttaaaatagggttatttgtt
tctctggagtttaacttcttgagttctttgtatatattggacattagccc
tctatcgaaggtagtgttggtaaagatcttttcccaatctgttggttgcc
attttgacctattgacaatgtcctttgccttacagaagctttgtaatttt
atgaggtcctatttgtcaattcttgcttttaaagcataaactattggtga
tgttttcaggaaaatttcccctgaaggttacccttcctaatccctcacaa
gtagtgccacttcctgatgattaagtattcaaatatatgagctcatggga
gtgagtcttactcaaacagctacaactgtcttagaatctctcttgctgtg
ttaaaaaaaatatgaccaaaagcaccgtgggaagaaaagggtttatttca
gcttacagcctatagttcatcatgtaggcaagtcagagtaggaacttaag
acaggaactgaagcagaagccagggagtagtttttttctaataaccactt
atcagtgagtacatctcatgcacatcctttcagatctgagttacctcact
caggatgatattttctagttccatccatttgcctgcaaaactcaggatat
tctcgtatttaatagctgagtagtacaccattgtgtaaatgaaccacatt
ttctgtatccattcttctgttgtgggacatctgggttgtttccagcttct
ggctatcacaaataaggctgctatgaacattgtagaacacgtgcccctgt
ggcatggtgaggcatcttttgggtatattcccaagagtggtatagctggg
tcttcaggtagtatctactttcaattttctgaggagcctccagattgatt
ttcagagtggttgtactggttgcaatcccaccagcaatggaggagtgttc
ctctttctccacatcctctcaaacatgtatgtcactgaggttttgttctt
agccattctgattggtgtaagtgaaatctcagtcccactgggaaagagaa
gaaagcaattcttcagtagggagggaggacctgagaggggaaggtggaac
ggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_59771062_59772219
seq2: B6Ng01-227G06.b_45_1197

seq1  GAATTCATAACAGTCTCATTATGTCACAGATGAAGAAACTGAGGCGTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAACAGTCTCATTATGTCACAGATGAAGAAACTGAGGCGTGAA  50

seq1  GCAATTAAATAGGTTGCCCAATGCCAGCATTTAAAGATTGGGTGACTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTAAATAGGTTGCCCAATGCCAGCATTTAAAGATTGGGTGACTAGA  100

seq1  ATTCTAATCCAGGCTCTGACTCTCATACACTTTTCATTTTGTTAGAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAATCCAGGCTCTGACTCTCATACACTTTTCATTTTGTTAGAAATG  150

seq1  GAAGGAACCAAAGTGCATGAAGATAATTTTAGCCTAGGTGAGACCAGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAACCAAAGTGCATGAAGATAATTTTAGCCTAGGTGAGACCAGGGA  200

seq1  CCATATTGTTCTAGTTGTTAGCATCCAGAATCACTAGCCCTCAGTGCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTGTTCTAGTTGTTAGCATCCAGAATCACTAGCCCTCAGTGCTCT  250

seq1  CAGCCCCTGTTCTACAGCCATGATGAGCAAGTGACATAATGACGAGCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCTGTTCTACAGCCATGATGAGCAAGTGACATAATGACGAGCCAT  300

seq1  ACTGAAATGGCTACTTTGTTTACTCTCAGCCACCATAGGATGCCAGGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAATGGCTACTTTGTTTACTCTCAGCCACCATAGGATGCCAGGTAA  350

seq1  TGCTAGCATGCTAATTAATCCTGCCCATCTGGCTAATGCAGTCTTGATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCATGCTAATTAATCCTGCCCATCTGGCTAATGCAGTCTTGATAA  400

seq1  TTTATAATCCAAAGCCTTTGGGCACAAAGACCTATTAACATGCTAATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATCCAAAGCCTTTGGGCACAAAGACCTATTAACATGCTAATATA  450

seq1  CCTTCTGACTATTCTAGTAGCTTTTCAATTAGTAATTATCTATAGACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGACTATTCTAGTAGCTTTTCAATTAGTAATTATCTATAGACTGA  500

seq1  GCCAATGAGAGGAAATTTTTTTCAAGTGATTAGCACCTTGGAAATCATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATGAGAGGAAATTTTTTTCAAGTGATTAGCACCTTGGAAATCATGA  550

seq1  CCAGTCTGGTTTCTGACTAACATTCTTTGGTTTTGGCAGTTAGCATTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTGGTTTCTGACTAACATTCTTTGGTTTTGGCAGTTAGCATTTCT  600

seq1  CATTCCAGAAAATTACTCTGGTGAGTTCAGTTGATGGCTTGGGGCCATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCAGAAAATTACTCTGGTGAGTTCAGTTGATGGCTTGGGGCCATGA  650

seq1  AAACTCAAACCTATTTGATGGCCAATTACTATTTTGAGAAAATAGAATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAAACCTATTTGATGGCCAATTACTATTTTGAGAAAATAGAATTA  700

seq1  TAACTTATTGGTATAAGTACTTGATTTGCTTAACAAAATATTATAACAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTATTGGTATAAGTACTTGATTTGCTTAACAAAATATTATAACAGA  750

seq1  ATACTTATTCTGGTTCTAAAAGGCACTCCAGAACTGTAAAAATATAGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTATTCTGGTTCTAAAAGGCACTCCAGAACTGTAAAAATATAGTAT  800

seq1  GGATGTATATTAGGTTAATATTGTTAAATGTCTAGTGGTTGTCTTAGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTATATTAGGTTAATATTGTTAAATGTCTAGTGGTTGTCTTAGATG  850

seq1  TAACAATGGTGTTATGGCTTACAAGACTGATGTTGGCATATTTAGGGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TAACAATGGTGTTATGGCTTACAAGACTGATGTTGGCATATTTAGGGAT-  899

seq1  AAATATTATGATATCTGAAACTAACAATCAAATGGCTGGAGACCTAATTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTATGATATCTGAAACTAACAATCAAATGGCTGGAGACCTAATTA  949

seq1  AGATAGATAGGACAAGGACACGCAATTATGGTGAAGCATAAAGTATTTTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATAGGACAAGGACACGCAATTATGGTGAAGCATAAAGTATTTTC  999

seq1  TA-TTTGTGAAAG-AGATATGTGGGTTCACTTTGATGCGAAAAAAACTTT  1048
      || |||||||||| |||||||||||||||| |||||||||||||    ||
seq2  TATTTTGTGAAAGAAGATATGTGGGTTCAC-TTGATGCGAAAAA---CTT  1045

seq1  TACTACAAAT-ATTTA-TCTCCAGAAAACTATCAATATAACAAAAGGCAT  1096
      |||||||||| ||||| ||||||| |||||||| |||| |||||  ||||
seq2  TACTACAAATAATTTATTCTCCAG-AAACTATC-ATAT-ACAAA--GCAT  1090

seq1  ATATACTTTAAAAATCTGTA-TGTA-TCTGATCTCTCTACCTTCCTGTGC  1144
      |  |||||| |||||||||| |||| ||||||||||||||| ||||||||
seq2  AATTACTTT-AAAATCTGTATTGTATTCTGATCTCTCTACC-TCCTGTGC  1138

seq1  TTCAGCTC-TCCCCT  1158
       ||||||| ||||||
seq2  CTCAGCTCTTCCCCT  1153


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