BAC Information

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BAC

Clone NameB6Ng01-228F16
Chromosome12 (Build37)
Map Location 43,030,046 - 43,030,953
singlet/doubletsinglet
Overlap geneImmp2l
Upstream geneLrrn3
Downstream geneEG638533
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228F16.bB6Ng01-228F16.g
ACCGA041787GA041788
length1,221920
definitionB6Ng01-228F16.b B6Ng01-228F16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccataaaatcaaataaccccattaaaaaatggggctcagaactga
acaaagaattctcacctgaggaataccgaatggctgagaagcacctgaaa
aaaatgttaaacatccttaatcatcagggaaatgcaaatcaaaacaaccc
tgagattctacttcactccaatcagaatggctaagatcaaaaattcaggt
gacagcagatgctggcttggatgtggagaaagaggaacactcctccattg
ttggtgggattgcaggcttgtacaaccactctggaaatcagtctggcggt
tcctcagataattggacatagtactaccggaggatccagcaatacctctc
ctgggcatatatccagaagatgccccaactggtaagaaggacacatgctc
cactatgttcatagcagccttatttataatagccagaagcaggaaagaac
ccagatgcccctcaacagaggaatggatacagaaaatgtggtacatctac
acaatggagtactactcagctattaaaaagaatgaatttatgaaattcct
agccaaatggatggacctggagggcatcatcctgagtgaggtaacacatt
cataaaggaactcacacaatatgtactcactgataagtggatattagccc
caaacctaggatacccaagatataagatacaatttcctaaacacatgaaa
ctcaagaaaaatgaggactgaagtgtggacactatgcccctccttggaag
tgggaacaaaacacccatggaaggagttaaagagacaaagtttggagctg
agacgaaaggatggaccatgtagagactgccatatccaggatccacccca
taataagcttccaaacactgacaccattgcatacactagcaagatttatc
gaaaggacctagatgtagctgtctcttgtgagtctatgccagggcctagc
aacacagaagtggatgctcacagtcagctaatttgatgggtcacactgcc
ccaattggaggagctattagaatttacccaaggagcttaaaggcaacttg
caaccctataggtgtacacatatgaactaacccagttacccgggagctct
tgctctagtctgcattatgttatcaatcggcattcaccttcaagagagga
ccattggacttgccaacttttatggttccaagtacagggtaatctctcaa
gggtcctaaaatgggtgtgag
gaattccacacatgggtacagtgcaaaatgataatatccatttcatctac
cctacaattctcactaatctcccaaacccatcccatcccaaagttcatgc
ctatttcatatctcttttttaataacctactaggtcaagttagcacttcc
tatgtatgcatgggtgtcaggccatccaccagggcatggacaacctacag
tggatgtctacagtggcaacctcaaagaaggatgagcctccttattttgg
cagttatcagtcccagtatctcctcagcaaagggcagggcctccagagcc
ccttcctcatggatgacagaacatttggctagcttgattttgcagaggta
agcacaccttctgagatttcacatgtgcaacaggaacatcctgtggcggg
ttgaagcagtttcccatttagggctgaacactcacattcagttatccttg
gcactttaaccagttatgtggctcccaattgaccaatgtctactgagata
ggattcactgatgagagttgagagaagccccaggctatgagtatgaacaa
atatttatgaggcagtgtgactgtgtgactatttagcaagataaaaatcc
caggctctaccctgggtctgtaaccttcccagccactggcttttgaactg
gctcacagcatcaggaatgaacggctcccatggaacagcccttaaattta
gtcataatctgtctgccactagaacagcagagggaacattgggcctggca
ggttggtgcagcatgctctggataaggtcattatgactttcttcccccag
aagccttcacggctactctgaagactattaaagctagccaggcagggaat
accaggccatcttgagattgatttctctggtgtcctacagccgcagagct
tggttgtcctcagcaatcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_43030046_43030953
seq2: B6Ng01-228F16.g_71_981

seq1  GAATTCCACACATGGGTACAGTGCAAAATGATAATATCCATTTCATCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACATGGGTACAGTGCAAAATGATAATATCCATTTCATCTAC  50

seq1  CCTACAATTCTCACTAATCTCCCAAACCCATCCCATCCCAAAGTTCATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAATTCTCACTAATCTCCCAAACCCATCCCATCCCAAAGTTCATGC  100

seq1  CTATTTCATATCTCTTTTTTAATAACCTACTAGGTCAAGTTAGCACTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCATATCTCTTTTTTAATAACCTACTAGGTCAAGTTAGCACTTCC  150

seq1  TATGTATGCATGGGTGTCAGGCCATCCACCAGGGCATGGACAACCTACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATGCATGGGTGTCAGGCCATCCACCAGGGCATGGACAACCTACAG  200

seq1  TGGATGTCTACAGTGGCAACCTCAAAGAAGGATGAGCCTCCTTATTTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTCTACAGTGGCAACCTCAAAGAAGGATGAGCCTCCTTATTTTGG  250

seq1  CAGTTATCAGTCCCAGTATCTCCTCAGCAAAGGGCAGGGCCTCCAGAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATCAGTCCCAGTATCTCCTCAGCAAAGGGCAGGGCCTCCAGAGCC  300

seq1  CCTTCCTCATGGATGACAGAACATTTGGCTAGCTTGATTTTGCAGAGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTCATGGATGACAGAACATTTGGCTAGCTTGATTTTGCAGAGGTA  350

seq1  AGCACACCTTCTGAGATTTCACATGTGCAACAGGAACATCCTGTGGCGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACCTTCTGAGATTTCACATGTGCAACAGGAACATCCTGTGGCGGG  400

seq1  TTGAAGCAGTTTCCCATTTAGGGCTGAACACTCACATTCAGTTATCCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGCAGTTTCCCATTTAGGGCTGAACACTCACATTCAGTTATCCTTG  450

seq1  GCACTTTAACCAGTTATGTGGCTCCCAATTGACCAATGTCTACTGAGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTTAACCAGTTATGTGGCTCCCAATTGACCAATGTCTACTGAGATA  500

seq1  GGATTCACTGATGAGAGTTGAGAGAAGCCCCAGGCTATGAGTATGAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCACTGATGAGAGTTGAGAGAAGCCCCAGGCTATGAGTATGAACAA  550

seq1  ATATTTATGAGGCAGTGTGACTGTGTGACTATTTAGCAAGATAAAAATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATGAGGCAGTGTGACTGTGTGACTATTTAGCAAGATAAAAATCC  600

seq1  CAGGCTCTACCCTGGGTCTGTAACCTTCCCAGCCACTGGCTTTTGAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCTACCCTGGGTCTGTAACCTTCCCAGCCACTGGCTTTTGAACTG  650

seq1  GCTCACAGCATCAGGAATGAACGGCTCCCATGGAACAGCCCTTAAATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACAGCATCAGGAATGAACGGCTCCCATGGAACAGCCCTTAAATTTA  700

seq1  GTCATAATCTGTCTGCCACTAGAACAGCAGAGGGAACATTGGGCCTGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAATCTGTCTGCCACTAGAACAGCAGAGGGAACATTGGGCCTGGCA  750

seq1  GGTTGGTGCAGCATGCTCTGGATAAGGTCATTTATGACTTTCTTCCCCCA  800
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGTTGGTGCAGCATGCTCTGGATAAGGTCA-TTATGACTTTCTTCCCCCA  799

seq1  GAAGCCTTCACGGCTACTCTGAAGACTATTAAAGCTAGCCA-GCAGGGAA  849
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GAAGCCTTCACGGCTACTCTGAAGACTATTAAAGCTAGCCAGGCAGGGAA  849

seq1  TACCAGG-CATCTTGAGATTGATTTCTCT-GTGTCCTACAGCCGCAGAGC  897
      ||||||| ||||||||||||||||||||| ||||||||||||||||||||
seq2  TACCAGGCCATCTTGAGATTGATTTCTCTGGTGTCCTACAGCCGCAGAGC  899

seq1  TTGG-TGTCCTC  908
      |||| |||||||
seq2  TTGGTTGTCCTC  911