BAC Information

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BAC

Clone NameB6Ng01-230P08
Chromosome12 (Build37)
Map Location 13,571,367 - 13,572,527
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043215, Mycn, EG668473, LOC628449, Ddx1, LOC627199, LOC627189, LOC100043243
Downstream geneLOC100042396, LOC238091, EG633789, LOC668481, AW125753, LOC100043256
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230P08.bB6Ng01-230P08.g
ACCGA043687GA043688
length7291,170
definitionB6Ng01-230P08.b B6Ng01-230P08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagagatctgcctggttttttttttttttttttttccatttttta
ttaggtatttagctcatttacatttccaatgctataccaaaagaccccct
tacccacccacccccactcccctacccacccactccccccctttggccct
ggcgttcccctgtactggggcacacaaagtctgcgtgtccaatgggcctc
tctttccagtgatggccgactaggccatcttttgatacatatgcagctag
agtcaagagctcaggggtactggttagttcataatgttgttccacctata
gggttgaagatccctttagctccttgggtactttctctagctcctccatt
gggagccctgtgatccatccattagctgactgtgagcatccacttctgtg
tttgctaggccccggcatagtctcacaagagacagctacatctgggtcct
ttcagtaaaatcttgctagtgtatgcaatggtgtcagcatttggaagctg
attatggggtggatccctggatatggcagtctctacatggtccatccttt
catctcagctccatactttgtttctgtaactccttccatgggtgttttgt
tcccacttctaaggaggggcatagtgtccacacttcagtcttcatttttc
ttgagtttcatgtgtttagggaaattgtatcttatatcgtgggtatccta
ggttttgggctaatatccacttatcagtg

gaattcttgacatatttaagatattccaacatcatgaaaactatctgtga
ttcaaaacaatgaacacatgtggatctccccaggtatatctggattcact
ctcaggtttgtattctacttgatgaactgaccgctcaccccactgagctg
gctgcctctagtgtcctgactatagctatgacacaaagaactgaacactc
gaccaaagagcagacaatgaatacagccccatatactaaagcagaactat
tctggaaaaagaatgaaggctcaccgccctgcatggggctgattgttctg
ttgtgctactccacaacagcagaacagagaagaaaattcacacactgggc
attctcagcatccctgtgcctcaatccaaaatgagatgatgaaaatgaca
gactgaatgagacgctttccaagctggtgagttgcttgtcccttgagcag
tgagctccaggcttccgtaactgtcaccgagtggggtaggcaattagaga
ggcagctctctttgagtcatttctgctcctgaaagtaaccccttacttaa
acttctgcaagcacctcaatgaagctcagtggttcactaggcccgatgtc
agtggatgcttacagtgggcttttgatggttccctatctgggataggtag
acactggttgacatctaccaaagaacagtgacacacaccagacaggctcc
cctgactgggccagcttagcctccactctacatccccactgctctttact
tcagaccttaccttctgtcctgtagctctgtgttctcctatatgcacctc
tttgaggacgagctaggcttcttgtattccaaagttacatggtacacacc
atactcaacagtattggtacaagagtctctcttagtacttatgtctgctg
ttcactcaatatattaccaataattgacaaaggacctcagcatttcatga
tgtttagaaccgttgattatagctttaaatgaacaaaatttttataaaaa
ttaacacagtagcatctaaggagaatgatagttttccttttctattgcct
ttgataaaatcataccaaaggcaccttggaggataggttactttcatctt
aaagaattaacagttctatccatggagaagaagccaggcagtaactagaa
caggaactgaatcagagatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_13571367_13572527
seq2: B6Ng01-230P08.g_70_1239 (reverse)

seq1  CATCTCTGCTTCAGTTCCTGTTTCTAGGTTCCTGCCCTGGCTTC-TCTTC  49
      |||||||| ||||||||||| ||||| ||| ||| ||||||||| ||| |
seq2  CATCTCTGATTCAGTTCCTG-TTCTA-GTTACTG-CCTGGCTTCTTCTCC  47

seq1  AT-GATAG-ACTGT--AATCTTTAAGATG-AAGTAAACTATTCCTCAAGT  94
      || ||||| |||||  | ||||||||||| |||||| |||| |  |||| 
seq2  ATGGATAGAACTGTTAATTCTTTAAGATGAAAGTAACCTATCCTCCAAGG  97

seq1  TGCCTTTGGTTATGATTTTATCAAA-GCAATAGAAA--GGAAACTATCA-  140
      ||||||||| ||||||||||||||| ||||||||||  | ||||||||| 
seq2  TGCCTTTGG-TATGATTTTATCAAAGGCAATAGAAAAGGAAAACTATCAT  146

seq1  TCTTCTTAGATGCTACTGTGTT-ATTTTTATAAAAATTT--GTCATTTAA  187
      ||| |||||||||||||||||| ||||||||||||||||   ||||||||
seq2  TCTCCTTAGATGCTACTGTGTTAATTTTTATAAAAATTTTGTTCATTTAA  196

seq1  AGCTATAATCAACGTTTCTAAACATCATGAAATGCTGAGGTCCTTTGTCA  237
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGCTATAATCAACGGTTCTAAACATCATGAAATGCTGAGGTCCTTTGTCA  246

seq1  ATTATTGGTAATATATTGAGTGAACAGCAGACATAAGTACTAAGAGAGAC  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGGTAATATATTGAGTGAACAGCAGACATAAGTACTAAGAGAGAC  296

seq1  TCTTGTACCAATACTGTTGAGTATGGTGTGTACCATGTAACTTTGGAATA  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTACCAATACTGTTGAGTATGGTGTGTACCATGTAACTTTGGAATA  346

seq1  CAAGAAGCCTAGCTCGTCCTCAAAGAGGTGCATATAGGAGAACACAGAGC  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGCCTAGCTCGTCCTCAAAGAGGTGCATATAGGAGAACACAGAGC  396

seq1  TACAGGACAGAAGGTAAGGTCTGAAGTAAAGAGCAGTGGGGATGTAGAGT  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGACAGAAGGTAAGGTCTGAAGTAAAGAGCAGTGGGGATGTAGAGT  446

seq1  GGAGGCTAAGCTGGCCCAGTCAGGGGAGCCTGTCTGGTGTGTGTCACTGT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTAAGCTGGCCCAGTCAGGGGAGCCTGTCTGGTGTGTGTCACTGT  496

seq1  TCTTTGGTAGATGTCAACCAGTGTCTACCTATCCCAGATAGGGAACCATC  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGTAGATGTCAACCAGTGTCTACCTATCCCAGATAGGGAACCATC  546

seq1  AAAAGCCCACTGTAAGCATCCACTGACATCGGGCCTAGTGAACCACTGAG  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCCACTGTAAGCATCCACTGACATCGGGCCTAGTGAACCACTGAG  596

seq1  CTTCATTGAGGTGCTTGCAGAAGTTTAAGTAAGGGGTTACTTTCAGGAGC  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTGAGGTGCTTGCAGAAGTTTAAGTAAGGGGTTACTTTCAGGAGC  646

seq1  AGAAATGACTCAAAGAGAGCTGCCTCTCTAATTGCCTACCCCACTCGGTG  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGACTCAAAGAGAGCTGCCTCTCTAATTGCCTACCCCACTCGGTG  696

seq1  ACAGTTACGGAAGCCTGGAGCTCACTGCTCAAGGGACAAGCAACTCACCA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTACGGAAGCCTGGAGCTCACTGCTCAAGGGACAAGCAACTCACCA  746

seq1  GCTTGGAAAGCGTCTCATTCAGTCTGTCATTTTCATCATCTCATTTTGGA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAAAGCGTCTCATTCAGTCTGTCATTTTCATCATCTCATTTTGGA  796

seq1  TTGAGGCACAGGGATGCTGAGAATGCCCAGTGTGTGAATTTTCTTCTCTG  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCACAGGGATGCTGAGAATGCCCAGTGTGTGAATTTTCTTCTCTG  846

seq1  TTCTGCTGTTGTGGAGTAGCACAACAGAACAATCAGCCCCATGCAGGGCG  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTGTTGTGGAGTAGCACAACAGAACAATCAGCCCCATGCAGGGCG  896

seq1  GTGAGCCTTCATTCTTTTTCCAGAATAGTTCTGCTTTAGTATATGGGGCT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCTTCATTCTTTTTCCAGAATAGTTCTGCTTTAGTATATGGGGCT  946

seq1  GTATTCATTGTCTGCTCTTTGGTCGAGTGTTCAGTTCTTTGTGTCATAGC  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCATTGTCTGCTCTTTGGTCGAGTGTTCAGTTCTTTGTGTCATAGC  996

seq1  TATAGTCAGGACACTAGAGGCAGCCAGCTCAGTGGGGTGAGCGGTCAGTT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTCAGGACACTAGAGGCAGCCAGCTCAGTGGGGTGAGCGGTCAGTT  1046

seq1  CATCAAGTAGAATACAAACCTGAGAGTGAATCCAGATATACCTGGGGAGA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGTAGAATACAAACCTGAGAGTGAATCCAGATATACCTGGGGAGA  1096

seq1  TCCACATGTGTTCATTGTTTTGAATCACAGATAGTTTTCATGATGTTGGA  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATGTGTTCATTGTTTTGAATCACAGATAGTTTTCATGATGTTGGA  1146

seq1  ATATCTTAAATATGTCAAGAATTC  1161
      ||||||||||||||||||||||||
seq2  ATATCTTAAATATGTCAAGAATTC  1170


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