BAC Information

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BAC

Clone NameB6Ng01-231N10
Chromosome12 (Build37)
Map Location 42,264,725 - 42,265,715
singlet/doubletsinglet
Overlap genenone
Upstream geneDock4, LOC638487, LOC100043157, LOC100043162, Lrrn3
Downstream geneImmp2l, EG638533
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231N10.bB6Ng01-231N10.g
ACCGA044329GA044330
length1,0061,175
definitionB6Ng01-231N10.b B6Ng01-231N10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaattctattgcaaacttttgtttgtttgtttgtttgtttactt
cctttacattagaaaaaccatgtgtagtcagatgtctagctattcagaga
gaaacacctgtgagtgaacatatatagacttttgtcacaattccctacaa
tacccagaactccctatataacataactacaactacatatactatttgta
tggttttaggcattgtacataatctcaatgtggtacaatgtatgtcagag
ggcttgtagatcttttgccccaactgccccatgtaacaaatagggtttga
agaaccatggcttttgatattcaacactagtagaggaagcaatccccaaa
ttactagtagcttgttttttgtcaacctaacactgggtagagtcattttg
gaatatggaacctcaactaaaaaagacggccccgattgacctatggacaa
aattattgtgtattcacttggttgatgactgatgtggtggtgggggtaga
acccagctaattgtgggtggtgctactcttgagcctatcatcctgagtgc
tatagaaaagcaggctgagcaagccaagggaaacaagctggtaagcagca
ctcttccaggttcttgctctaaattttcttggataatggactacaaacta
taaaataaaaacgaaccctctcttctccaagttgctttggtcaaggtctt
tagcacaagaatagaaaccctaaccaagaaacctactaaaggatggttct
gccataactccactcagtcccatactcctgaaattcctaccaatacctgc
tgatttctcaacagcccagggagtgtcaagaacaatctattatacttttc
cttttaatttataaaaatgaaaatcctaataatcaaaataatttatctta
ggacccttactttaaggtctctttggttattagacacaccctgaaatttt
gatttttaattctggacttgaaaattaatgaaagggactcattacagtat
gcatga

gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatatatatgtgaccctaaaaattccaccagagaactcctaaa
cctgataaacagcttcggtgaagtagctggatataaaattaactcaaaca
agtcaatggcctttctctacacaaagaataaacaggctgagaaagaaatt
agggaaacaacacccttctcattagtcacaaataatataaaatatctcgg
cgtgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagt
ctctgaagaaagaaattaaagaagatctcagaagatggaaagatctcaca
tgctcatggattggcaggatcaatattgtaaaaatggctatcttgccaaa
agcaatctacagattcaatgcaatccccatcaaaattccaactcaattct
tcaacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaa
cctaggatagcaaaaactcttctcaaggataaaagaacctctggtggaat
caccatgcctgacctaaagctttactacagagcaattgtggtaaaaactg
catggtactggtatagtgacagacaagtagagcaatggaatagaattgaa
gacccagaaatgaacccacacacctatggtcacttgatcttcgacaaggg
agctaaaaccatccagtggaagaaagacagcattttcaacaaatggtgct
ggcacaactggttgttatcatgtagaagaatgcgaattgatccattactt
atctcttgtactagtcaatctaaatggatcagactcacataaaacagaga
cactgaaccttatgacgaaaagtgggcaaagcttgaaagaattggccaag
ggtaaaatttcctgaacgacgcaatgcttgctgagatcgaaaattgcaag
tggtaaccttagtgaaaacccttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_42264725_42265715
seq2: B6Ng01-231N10.b_46_1051 (reverse)

seq1  TCATGC-TACTGTATTGAGT-CCTTTCATT-ATTTTCATGT-CAGTATTA  46
      |||||| ||||||| ||||| ||||||||| ||||||| || ||| ||||
seq2  TCATGCATACTGTAATGAGTCCCTTTCATTAATTTTCAAGTCCAGAATTA  50

seq1  AAAATC-AAATTTCAGGGTGTGTCTAAT-ACCAAAGAGACCTT-AAGTAA  93
      |||||| ||||||||||||||||||||| |||||||||||||| ||||||
seq2  AAAATCAAAATTTCAGGGTGTGTCTAATAACCAAAGAGACCTTAAAGTAA  100

seq1  -GGTTCTTATAT-AATTATTTTGATTATT-GGATTTTCA-TTTTATAAAT  139
       ||| || | || |||||||||||||||| ||||||||| ||||||||||
seq2  GGGTCCTAAGATAAATTATTTTGATTATTAGGATTTTCATTTTTATAAAT  150

seq1  TAAA--GGAAAGTATAATAGATTGTTCTTGACACTCCCT-GGCTGTTGAG  186
      ||||  | ||||||||||||||||||||||||||||||| ||||||||||
seq2  TAAAAGGAAAAGTATAATAGATTGTTCTTGACACTCCCTGGGCTGTTGAG  200

seq1  AAATCAGCAGGTATTGGTAGGAATTTCAGGAGTATGGGACTGAGTGGAGT  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGCAGGTATTGGTAGGAATTTCAGGAGTATGGGACTGAGTGGAGT  250

seq1  TATGGCAGAACCATCCTTTAGTAGGTTTCTTGGTTAGGGTTTCTATTCTT  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCAGAACCATCCTTTAGTAGGTTTCTTGGTTAGGGTTTCTATTCTT  300

seq1  GTGCTAAAGACCTTGACCAAAGCAACTTGGAGAAGAGAGGGTTCGTTTTT  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAAAGACCTTGACCAAAGCAACTTGGAGAAGAGAGGGTTCGTTTTT  350

seq1  ATTTTATAGTTTGTAGTCCATTATCCAAGAAAA-TTAGAGCAAGAACCTG  385
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATTTTATAGTTTGTAGTCCATTATCCAAGAAAATTTAGAGCAAGAACCTG  400

seq1  GAAGAGTGCTGCTTACCAGCTTGTTTCCCTTGGCTTGCTCAGCCTGCTTT  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTGCTGCTTACCAGCTTGTTTCCCTTGGCTTGCTCAGCCTGCTTT  450

seq1  TCTATAGCACTCAGGATGATAGGCTCAAGAGTAGCACCACCCACAATTAG  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAGCACTCAGGATGATAGGCTCAAGAGTAGCACCACCCACAATTAG  500

seq1  CTGGGTTCTACCCCCACCACCACATCAGTCATCAACCAAGTGAATACACA  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTCTACCCCCACCACCACATCAGTCATCAACCAAGTGAATACACA  550

seq1  ATAATTTTGTCCATAGGTCAATCGGGGCCGTCTTTTTTAGTTGAGGTTCC  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTGTCCATAGGTCAATCGGGGCCGTCTTTTTTAGTTGAGGTTCC  600

seq1  ATATTCCAAAATGACTCTACCCAGTGTTAGGTTGACAAAAAACAAGCTAC  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCAAAATGACTCTACCCAGTGTTAGGTTGACAAAAAACAAGCTAC  650

seq1  TAGTAATTTGGGGATTGCTTCCTCTACTAGTGTTGAATATCAAAAGCCAT  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATTTGGGGATTGCTTCCTCTACTAGTGTTGAATATCAAAAGCCAT  700

seq1  GGTTCTTCAAACCCTATTTGTTACATGGGGCAGTTGGGGCAAAAGATCTA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTTCAAACCCTATTTGTTACATGGGGCAGTTGGGGCAAAAGATCTA  750

seq1  CAAGCCCTCTGACATACATTGTACCACATTGAGATTATGTACAATGCCTA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCTCTGACATACATTGTACCACATTGAGATTATGTACAATGCCTA  800

seq1  AAACCATACAAATAGTATATGTAGTTGTAGTTATGTTATATAGGGAGTTC  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATACAAATAGTATATGTAGTTGTAGTTATGTTATATAGGGAGTTC  850

seq1  TGGGTATTGTAGGGAATTGTGACAAAAGTCTATATATGTTCACTCACAGG  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTATTGTAGGGAATTGTGACAAAAGTCTATATATGTTCACTCACAGG  900

seq1  TGTTTCTCTCTGAATAGCTAGACATCTGACTACACATGGTTTTTCTAATG  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCTCTGAATAGCTAGACATCTGACTACACATGGTTTTTCTAATG  950

seq1  TAAAGGAAGTAAACAAACAAACAAACAAACAAAAGTTTGCAATAGAATTT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAAGTAAACAAACAAACAAACAAACAAAAGTTTGCAATAGAATTT  1000

seq1  GAATTC  991
      ||||||
seq2  GAATTC  1006


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