BAC Information

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BAC

Clone NameB6Ng01-234I14
Chromosome12 (Build37)
Map Location 66,517,559 - 66,518,741
singlet/doubletsinglet
Overlap genenone
Upstream geneEG623046, LOC623123, LOC217645, LOC217647, Gm527, Klhl28, A430041B07Rik, Prpf39, Fkbp3, Fancm, C79407, Wdr20b
Downstream geneLOC100040700, EG238217
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234I14.bB6Ng01-234I14.g
ACCGA046274GA046275
length1,1641,126
definitionB6Ng01-234I14.b B6Ng01-234I14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattaactttctacagaacaatatttgagagataattgctacttt
aagtgaatttttgcacacttaaaagaatcatatttcttaaaaagagggac
tacaaaaagaaattagagcattaacctgagaattactcgttcatttccca
gcacacttatcattagaacacttaatggtatctgaaggtacgatattcct
ttatgatgcacattgccattttagaaacttggaacgaacttggcaggaaa
tgatttgagggtagctagtattggataatgcacatgtttctatgtcctgc
aaagttgctggctccctctctagagtacaaactaactgaaacctggagca
tatttattagtatagaatttttattatcatcacattagtaccaggtctat
agaaatgtaaaagtcataaaaacaaacttaacaatgacatctcctgttcc
cagctcattcattcttatcttttccccaaacagtcatttcttctaattgt
gaaacacacacacctactacatattatctttgcccacatatcagatatca
ttaagatccagttaatcattgtaccagaggggcgagaaatacttgaaagg
cttgttaaatcaacctctttctgtgaaacagcttctcgtaatcagtcaaa
attcttatcgtcatgtagaatgggatagaggtgtgctatagaaagaagcc
atacatgccagacccaaaggaatctgctgcaataaaaaataataataata
atgataacgtggctaaggtgttccaaaacctactttcctgttcgtttctc
caaattattgagcttcccacaggttttgctgccatgtgctcagagttttt
tatagctcagaaactgtacaacttcattgtcaccactggagacaaaattt
ccaaaattggtccagttgtctctcttcattttcaagagacgatagaacaa
tgaaatacacaatagcacgggggcgttgattcaatcagttgtcaacaatg
atgcttcattgacattaagctgcccacagttcacagactggatgcttaac
atcttggaaagcatttcagtgatgtgagtgcacttacctctctcaccctc
tattaaaacctgctcctgcttttctttacctcctgattctttggttctca
gactgaatgccaca

gaattcactaggaattacaattctttattcatctgatcttgatttaactt
taataagttatacctactgagaaaattgttcatttcttttaaattttcca
atttggagtacaggtttttaaagtatgattcttttaatttcctcagtgtt
ggttgtttggtttccttttggtttctgattttgttaattcaaatagtctg
tctttttgtatgtttggataagggtttatattacttgtttattttttcaa
agaaccagttctttgtttcattattctttgcattgttgtcttttctattg
attttggccttcagcttgattatcttttaccatcaacccctcttgggtgt
gattatttctttttgttcttaagctttgaggtgtgctgttaagttgatag
tatgagctctacccctcccccatcccccctaaatgtaggcacttagtgct
gtgaactttcctattagtacctctttcattgtttcacatacatttgggta
tactgtgttttcattttcattttattcagaaagtctttaatttctttatt
tatttctgtcaactcattttcattcagtagagagcttttctgtttccacc
agtttggaagctttctgtcgttgttgaaatccatctttagtccatgctgg
tctgatagaatacagggaattatttcaaatttcttgtacctgtagcgact
tattttatattcaagtatatggtcagttttggagaaagttccatgaggta
cagagtaaaaggtacattcttttgtgtttgcatgacatgttctctacata
tctgttaggtccatttggtttatactgtctatttactcctgtaattttat
gttaggtattgtctggatgaagtgtgcattggtgagcgtcaggattgaaa
tctctcactatcggtgtgtgagtcactattgtaattgatttgatttaagc
tgtaatagttctttttacaatagtggatgcccttgtgtttggggcataga
tgttcagaattgaagtgtttatcttggtgacctttctttgatagtatgaa
gtgttctttccccaatgtgggaaaggacaaaggaagagaattgttctggg
tttccttagaatggaattaaccttcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_66517559_66518741
seq2: B6Ng01-234I14.b_47_1210 (reverse)

seq1  TGTGGCATTCAGTCTGTGAGGACACAAAAGAAAACCAGGAGGTTAAAGAA  50
      |||||||||||||||| ||    || ||||  || ||||||| |||||||
seq2  TGTGGCATTCAGTCTGAGA----ACCAAAG--AATCAGGAGG-TAAAGAA  43

seq1  AAAGGCAGAAGGCAGTTTTTAATAGAAGGGTGAGGAGAAGT-AGTGCACT  99
      ||  |||| | |||| ||||||||| ||||||| |||| || ||||||||
seq2  AA--GCAGGA-GCAGGTTTTAATAG-AGGGTGA-GAGAGGTAAGTGCACT  88

seq1  CACATCACTGGAAATGCTTTCCAGGAATTGTTTAAGCATCCAGTCTGTGA  149
      ||||||||| ||||||||||||| ||  || |||||||||||||||||||
seq2  CACATCACT-GAAATGCTTTCCAAGA--TG-TTAAGCATCCAGTCTGTGA  134

seq1  ACTGTGGGCAGCTTTAATGTCAATGAAGCATCATTGTTGACAAACTGATT  199
      |||||||||||| |||||||||||||||||||||||||||| ||||||||
seq2  ACTGTGGGCAGC-TTAATGTCAATGAAGCATCATTGTTGAC-AACTGATT  182

seq1  TGAAATCAACGCCCCCGTGCTATTGTGTATTTCATTGTTCTATCGTCTCT  249
         |||||||||||||||||||||||||||||||||||||||||||||||
seq2  --GAATCAACGCCCCCGTGCTATTGTGTATTTCATTGTTCTATCGTCTCT  230

seq1  TGAAAATGAAGAGAGACAACTGGACCAATTTTGGAAATTTTGTCTCCAGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGAAGAGAGACAACTGGACCAATTTTGGAAATTTTGTCTCCAGT  280

seq1  GGTGACAATGAAGTTGTACAGTTTCTGAGCTATAAAAAACTCTGAGCACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAATGAAGTTGTACAGTTTCTGAGCTATAAAAAACTCTGAGCACA  330

seq1  TGGCAGCAAAACCTGTGGGAAGCTCAATAATTTGGAGAAACGAACAGGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCAAAACCTGTGGGAAGCTCAATAATTTGGAGAAACGAACAGGAA  380

seq1  AGTAGGTTTTGGAACACCTTAGCCACGTTATCATTATTATTATTATTTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGTTTTGGAACACCTTAGCCACGTTATCATTATTATTATTATTTTT  430

seq1  TATTGCAGCAGATTCCTTTGGGTCTGGCATGTATGGCTTCTTTCTATAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCAGCAGATTCCTTTGGGTCTGGCATGTATGGCTTCTTTCTATAGC  480

seq1  ACACCTCTATCCCATTCTACATGACGATAAGAATTTTGACTGATTACGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTCTATCCCATTCTACATGACGATAAGAATTTTGACTGATTACGAG  530

seq1  AAGCTGTTTCACAGAAAGAGGTTGATTTAACAAGCCTTTCAAGTATTTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTTTCACAGAAAGAGGTTGATTTAACAAGCCTTTCAAGTATTTCT  580

seq1  CGCCCCTCTGGTACAATGATTAACTGGATCTTAATGATATCTGATATGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCTCTGGTACAATGATTAACTGGATCTTAATGATATCTGATATGTG  630

seq1  GGCAAAGATAATATGTAGTAGGTGTGTGTGTTTCACAATTAGAAGAAATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGATAATATGTAGTAGGTGTGTGTGTTTCACAATTAGAAGAAATG  680

seq1  ACTGTTTGGGGAAAAGATAAGAATGAATGAGCTGGGAACAGGAGATGTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTGGGGAAAAGATAAGAATGAATGAGCTGGGAACAGGAGATGTCA  730

seq1  TTGTTAAGTTTGTTTTTATGACTTTTACATTTCTATAGACCTGGTACTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAGTTTGTTTTTATGACTTTTACATTTCTATAGACCTGGTACTAA  780

seq1  TGTGATGATAATAAAAATTCTATACTAATAAATATGCTCCAGGTTTCAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGATAATAAAAATTCTATACTAATAAATATGCTCCAGGTTTCAGT  830

seq1  TAGTTTGTACTCTAGAGAGGGAGCCAGCAACTTTGCAGGACATAGAAACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGTACTCTAGAGAGGGAGCCAGCAACTTTGCAGGACATAGAAACA  880

seq1  TGTGCATTATCCAATACTAGCTACCCTCAAATCATTTCCTGCCAAGTTCG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATTATCCAATACTAGCTACCCTCAAATCATTTCCTGCCAAGTTCG  930

seq1  TTCCAAGTTTCTAAAATGGCAATGTGCATCATAAAGGAATATCGTACCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGTTTCTAAAATGGCAATGTGCATCATAAAGGAATATCGTACCTT  980

seq1  CAGATACCATTAAGTGTTCTAATGATAAGTGTGCTGGGAAATGAACGAGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACCATTAAGTGTTCTAATGATAAGTGTGCTGGGAAATGAACGAGT  1030

seq1  AATTCTCAGGTTAATGCTCTAATTTCTTTTTGTAGTCCCTCTTTTTAAGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCAGGTTAATGCTCTAATTTCTTTTTGTAGTCCCTCTTTTTAAGA  1080

seq1  AATATGATTCTTTTAAGTGTGCAAAAATTCACTTAAAGTAGCAATTATCT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGATTCTTTTAAGTGTGCAAAAATTCACTTAAAGTAGCAATTATCT  1130

seq1  CTCAAATATTGTTCTGTAGAAAGTTAATGAATTC  1183
      ||||||||||||||||||||||||||||||||||
seq2  CTCAAATATTGTTCTGTAGAAAGTTAATGAATTC  1164


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