BAC Information

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BAC

Clone NameB6Ng01-238E20
Chromosome12 (Build37)
Map Location 38,488,842 - 38,489,716
singlet/doubletsinglet
Overlap genenone
Upstream geneMeox2, A530016O06Rik
Downstream geneLOC100043139, Dgkb, LOC668824, LOC100043142
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238E20.bB6Ng01-238E20.g
ACCGA049034GA049035
length749876
definitionB6Ng01-238E20.b B6Ng01-238E20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagacatcaacaaaccaaattatccgcataaaaactggggtgag
ccaagacttctcaatagaggaatcttaaatagttgagaaacacttaaaaa
attgttcaacatcattagctattagacaaatgcaaatctagtcaacttag
attccatttcacacttgtcagaatggctagcatcaacaacacaagtgata
gctcatgatagtgaggacatagatcaaagaagacattcctccatcgctag
tgggagggcaatctttcatagccacaataaaattcaatatggcacactct
cagaaaattgggaattgatctacctcaactatagacccagatatagttct
cctggtcagatacccagaggaagtttcatcttaccacaaggatacttact
caactcccttcatagcagttttattaataatcgccagaaactggagatga
catagatgttccttaactgaagaatggataaagtaaatatggtgcaattt
acaaaatggattatttactcaactgttcagacacttgaccactaaccagg
cagcatacaccagctaatatgagaccccccccccaacacatatacagcag
agaactgtcgggtccgggtttagtcagagaagattcaccaaacccttaag
agactggaggccctaggaagtttagaggtctggtagggtggaggaacaga
gggtgggacatcctcatggagacagtggggaggggagtaggtatgggat

gaattccacttgtgatttctatgctaaaccaataaatatgattagaattg
tcctataactgcctgacattttacttctctgtgtgcctgtcatgaaacac
attccaagagctgacaccctcacttgactttcatggcttcaaaacaatga
tctttgcactggacttcggttccagatgcataaactttaattacattttt
gctactgataacctgttctttttctttgctctttattttttttttcagtt
tgcttgtccatttagtcctagtcttgtttgttttctttcatttccacctt
ttgttttgttttgttttgttttgttgttttttattacttttagatgccct
ttttgttttctaaagagaccagaaagtatgtggattggtgtggccagaga
gttagggaagacctgggaggcattgaagtagaggaaactgtaatcagaat
acattgcatgaaaaaaattactttcagtaataatgaggaagagagacact
ttatcaactgaagtaaatctaggcaatttgagcatagatcacagaagtat
cttgtttataactatgaacaatatgaacaatactttggcccatataattt
gtgcactgagtattagaatgataaatttttagtaatttacaggttataat
attaatgaagaatttgaaaattggtgtggataatttacatatttagttca
tgaggactagatatgccggataaactactagatctagaggtgtgaggttt
atgcatattagaaactgaaagagtggaaaatatactagtaactgccagga
aaacagtcaaggtgtggcaaaaatatctaagttcccactaagaagtgtgt
gcatgtgggcatgtgtgtatgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_38488842_38489716
seq2: B6Ng01-238E20.g_69_944

seq1  GAATTCCACTTGTGATTTCTATGCTAAACCAATAAATATGATTAGAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTTGTGATTTCTATGCTAAACCAATAAATATGATTAGAATTG  50

seq1  TCCTATAACTGCCTGACATTTTACTTCTCTGTGTGCCTGTCATGAAACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATAACTGCCTGACATTTTACTTCTCTGTGTGCCTGTCATGAAACAC  100

seq1  ATTCCAAGAGCTGACACCCTCACTTGACTTTCATGGCTTCAAAACAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAAGAGCTGACACCCTCACTTGACTTTCATGGCTTCAAAACAATGA  150

seq1  TCTTTGCACTGGACTTCGGTTCCAGATGCATAAACTTTAATTACATTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCACTGGACTTCGGTTCCAGATGCATAAACTTTAATTACATTTTT  200

seq1  GCTACTGATAACCTGTTCTTTTTCTTTGCTCTTTATTTTTTTTTTCAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGATAACCTGTTCTTTTTCTTTGCTCTTTATTTTTTTTTTCAGTT  250

seq1  TGCTTGTCCATTTAGTCCTAGTCTTGTTTGTTTTCTTTCATTTCCACCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTCCATTTAGTCCTAGTCTTGTTTGTTTTCTTTCATTTCCACCTT  300

seq1  TTGTTTTGTTTTGTTTTGTTTTGTTGTTTTTTATTACTTTTAGATGCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTTTTGTTTTGTTTTGTTGTTTTTTATTACTTTTAGATGCCCT  350

seq1  TTTTGTTTTCTAAAGAGACCAGAAAGTATGTGGATTGGTGTGGCCAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTCTAAAGAGACCAGAAAGTATGTGGATTGGTGTGGCCAGAGA  400

seq1  GTTAGGGAAGACCTGGGAGGCATTGAAGTAGAGGAAACTGTAATCAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGGAAGACCTGGGAGGCATTGAAGTAGAGGAAACTGTAATCAGAAT  450

seq1  ACATTGCATGAAAAAAATTACTTTCAGTAATAATGAGGAAGAGAGACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCATGAAAAAAATTACTTTCAGTAATAATGAGGAAGAGAGACACT  500

seq1  TTATCAACTGAAGTAAATCTAGGCAATTTGAGCATAGATCACAGAAGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAACTGAAGTAAATCTAGGCAATTTGAGCATAGATCACAGAAGTAT  550

seq1  CTTGTTTATAACTATGAACAATATGAACAATACTTTGGCCCATATAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTATAACTATGAACAATATGAACAATACTTTGGCCCATATAATTT  600

seq1  GTGCACTGAGTATTAGAATGATAAATTTTTAGTAATTTACAGGTTATAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACTGAGTATTAGAATGATAAATTTTTAGTAATTTACAGGTTATAAT  650

seq1  ATTAATGAAGAATTTGAAAATTGGTGTGGATAATTTACATATTTAGTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGAAGAATTTGAAAATTGGTGTGGATAATTTACATATTTAGTTCA  700

seq1  TGAGGACTAGATATGCCGGATAAACTACTAGATCTAGAGGTGTGAGGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGACTAGATATGCCGGATAAACTACTAGATCTAGAGGTGTGAGGTTT  750

seq1  ATGCATATTAGAAACTGAAAGAGTGGAAAATATACTAGTAACTGCCAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATATTAGAAACTGAAAGAGTGGAAAATATACTAGTAACTGCCAGGA  800

seq1  AAACAGTCAAGGTGTGGC-AAAATATCTAAGTTCCCACTAAGAAGTGTGT  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAACAGTCAAGGTGTGGCAAAAATATCTAAGTTCCCACTAAGAAGTGTGT  850

seq1  GCATGTGGGCATGTGTGTATGTGTGT  875
      ||||||||||||||||||||||||||
seq2  GCATGTGGGCATGTGTGTATGTGTGT  876


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