BAC Information

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BAC

Clone NameB6Ng01-238H13
Chromosome12 (Build37)
Map Location 94,348,653 - 94,349,591
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039425, LOC628116
Downstream gene2610022K04Rik-ps, EG633639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238H13.bB6Ng01-238H13.g
ACCGA049157GA049158
length1,167940
definitionB6Ng01-238H13.b B6Ng01-238H13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttcccacatagtatgagaacactctatgctccaaataaactta
aaatatattttgggttacctcactcaggatgatatgctccagatccatcc
atttgcctatgaatttcataaattcattgttttaatgtaccacattttct
gtatccattcttctgttgagggacatctgggttctttccagcttctggct
attataaataaggctgctatgaacatagtggagtgtgtgtccttattaca
atttggaacatcttctgggtatatgcccaggaaaggtatatcatcctgag
tgaggtaagccaatcacaaaagaacacacatgatatgtactcactgataa
gtggatattagctcagcaacttaaaatatccaagatacaatttgcaaaac
acatgaaactcaagaggaaggaagaccaatgagtggatacttgttccttc
ttagaattgggaacaaagctgggcatggtggctcacacctttaatcccag
aactcaggaggcagagttaggcggatttctgagttcagttagaggccagc
ctggtctacaaagtgatttccaggacagccagagctatacagaaaaaccc
tgtctcgaaaaaacaaaaacaaacaaacaaacaaagaaacaaacaaaaaa
caaaaaacaaacaaaaaacccaaacaaacaaacaaaaaaagaattgggaa
caaaatacccatagaaggagttacagagacaaagtttggagctgagacgg
ttaaaggaccatccagagactgccccactcagaaatccatcccatataca
accagcaaacccagacactattgcatatgccagcaagattttgctgacag
gaccctgataaagctacctcttgtgaggctatgccagtgcctggcaaata
cagaaatggatactcacagtcatctattggatgaaaccacagggccccta
atgagaagctagagaaagtacccaaagagctaaaggggtctgcaaacata
tagaggatcaaaatatcaactaaccagtaccccccagactatgtatctag
tgcatatgtagcagagatggactagttggccatcaatgggaggagatgcc
ttgtcttgccaagatctattgcaagttacaggaatgcaaggctcaaggaa
aaaggttgtgtggtggc
gaattccttaagaagtgtgttagaaataagatattatttgggggataaaa
ttctatgacaacatatatgttctatatgtatatcttacatgcattatatt
actataaacattcattttaaacatagatattttacccatatacaaaggaa
tatggtatctgtaatgcagacattatatatatatatatatatatatacat
ataggagaacattgaattttatctttgctgtttagagggaaacttcaaga
agaaggtcaaactatattcttgccaagtaattgcaaatatagataattta
caacattaagattaaatatttatgcatgaatataagaatagatgctttca
tgtcaattttcatgtaacttatagttaaatatatgatatcccatatgttc
aaagagaaaaactacctttccttacatttcccttcataaattaaagcaaa
gaaccttgaaacttaaataaaacatggcaaaagtagtcttttgaaaaaaa
caaacaactatttgtgtttgagtctataaaacaacaacacaaaatggaat
ataatttgaaagtgtaaagtgcaaaataaaatatccattcttcatactat
tgagaataaattaattggcttgcttgaatattgaaattaaaagtaaactt
cggggtttttccctggggaaagcacatatccccttgtcaacatttacttc
attgcttgttgttattgcttgtagttattccttcattgcttatatatggt
tgaggtctcctgatcttactttcttgttcaccttaacatacctgttggtg
aagtccttgttcaaagaaaatcagaccagttgattatgcaataccacgtg
gtcagtcctgaaaaatattatatatatatatatatatataattaggagga
gtactaagcaggatgtgtgtgtgtctgtggtggatgatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_94348653_94349591
seq2: B6Ng01-238H13.g_64_1003 (reverse)

seq1  ATATCATCCA-CACAGACACACACACATCCTGCTTAGTTACTCTTCTTAA  49
      |||||||||| |||||||||||||||||||||||||| ||||| || |||
seq2  ATATCATCCACCACAGACACACACACATCCTGCTTAG-TACTCCTCCTAA  49

seq1  TTATATATATATATATATATATAATATTTTTCAGGACTGACCACGTGGTA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATATATATATATATATAATATTTTTCAGGACTGACCACGTGGTA  99

seq1  TTGCATAATCAACTGGTCTGATTTTCTTTGAACAAGGACTTCACCAACAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATAATCAACTGGTCTGATTTTCTTTGAACAAGGACTTCACCAACAG  149

seq1  GTATGTTAAGGTGAACAAGAAAGTAAGATCAGGAGACCTCAACCATATAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTAAGGTGAACAAGAAAGTAAGATCAGGAGACCTCAACCATATAT  199

seq1  AAGCAATGAAGGAATAACTACAAGCAATAACAACAAGCAATGAAGT-AAT  248
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAGCAATGAAGGAATAACTACAAGCAATAACAACAAGCAATGAAGTAAAT  249

seq1  GTTGACAAGGGGATATGTGCTTTCCCCAGGGAAAAACCCCGAAGTTTACT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACAAGGGGATATGTGCTTTCCCCAGGGAAAAACCCCGAAGTTTACT  299

seq1  TTTAATTTCAATATTCAAGCAAGCCAATTAATTTATTCTCAATAGTATGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTCAATATTCAAGCAAGCCAATTAATTTATTCTCAATAGTATGA  349

seq1  AGAATGGATATTTTATTTTGCACTTTACACTTTCAAATTATATTCCATTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGATATTTTATTTTGCACTTTACACTTTCAAATTATATTCCATTT  399

seq1  TGTGTTGTTGTTTTATAGACTCAAACACAAATAGTTGTTTGTTTTTTTCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGTTGTTTTATAGACTCAAACACAAATAGTTGTTTGTTTTTTTCA  449

seq1  AAAGACTACTTTTGCCATGTTTTATTTAAGTTTCAAGGTTCTTTGCTTTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTACTTTTGCCATGTTTTATTTAAGTTTCAAGGTTCTTTGCTTTA  499

seq1  ATTTATGAAGGGAAATGTAAGGAAAGGTAGTTTTTCTCTTTGAACATATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGAAGGGAAATGTAAGGAAAGGTAGTTTTTCTCTTTGAACATATG  549

seq1  GGATATCATATATTTAACTATAAGTTACATGAAAATTGACATGAAAGCAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCATATATTTAACTATAAGTTACATGAAAATTGACATGAAAGCAT  599

seq1  CTATTCTTATATTCATGCATAAATATTTAATCTTAATGTTGTAAATTATC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTTATATTCATGCATAAATATTTAATCTTAATGTTGTAAATTATC  649

seq1  TATATTTGCAATTACTTGGCAAGAATATAGTTTGACCTTCTTCTTGAAGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGCAATTACTTGGCAAGAATATAGTTTGACCTTCTTCTTGAAGT  699

seq1  TTCCCTCTAAACAGCAAAGATAAAATTCAATGTTCTCCTATATGTATATA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTAAACAGCAAAGATAAAATTCAATGTTCTCCTATATGTATATA  749

seq1  TATATATATATATATATAATGTCTGCATTACAGATACCATATTCCTTTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATAATGTCTGCATTACAGATACCATATTCCTTTGT  799

seq1  ATATGGGTAAAATATCTATGTTTAAAATGAATGTTTATAGTAATATAATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGTAAAATATCTATGTTTAAAATGAATGTTTATAGTAATATAATG  849

seq1  CATGTAAGATATACATATAGAACATATATGTTGTCATAGAATTTTATCCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAAGATATACATATAGAACATATATGTTGTCATAGAATTTTATCCC  899

seq1  CCAAATAATATCTTATTTCTAACACACTTCTTAAGGAATTC  939
      |||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAATATCTTATTTCTAACACACTTCTTAAGGAATTC  940