BAC Information

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BAC

Clone NameB6Ng01-238N24
Chromosome12 (Build37)
Map Location 99,385,491 - 99,386,375
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382626, LOC100039743, LOC667732, LOC628351, LOC100039770, LOC667746
Downstream geneGalc, Gpr65, Kcnk10, Spata7, Ptpn21, Zc3h14, Eml5, LOC100039845, Ttc8, EG667779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238N24.bB6Ng01-238N24.g
ACCGA049455GA049456
length832890
definitionB6Ng01-238N24.b B6Ng01-238N24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaaagacaaaacttaaatggctgagaaacatttaaagacatg
ttcaatattcttagccatcaggcaattgtgagtcaaaactgctttgagag
ttcatgctccacctgtcagaatggctaagatcaataaagcagtgataggt
cgggctggtgaggatgtggagcaaggtaagcacttgtcctttccagatgg
gattgcaaacttcgacagtcactatggacatcagtgtggtggttcctcag
gaagaaagaagtcaatctacctcaagatcaagattaagctataccactct
tgggcatatagccaaggatgctctatcctaccacagagacacttgctcag
tcatgtttgttggtgctctattcataatagtcagaaattggaaaaaccta
ggtatctctcaacagaaggaggaattcagaaaatttggtacatttacaca
gtggaatattactcagcaattaataaaaggaaattctcaggcaaatggat
ggaaatagaaaaaaaaaaaaaaaacccgagtgcagtaacccagacccaga
aaaacaaatatggtatatatttgcttaaaagggccattagctgtcaagtc
aatgataactaagctactatctatagaaccacagaataaaaaactagtgg
ccaacacatatgtcttcctaggaaagggaaatagaataaatagttatgaa
tggatgggggggaatgaaacaggattatcaagagaagggaggagagacag
agaacagagagagaatacatacagagatgggggggaggaattaaggggct
atatggaaactaatacattatatgcttcctag
gaattcaggtcttcttgattgcaaagcaaacaatttactggtagctatct
tcccaactatgtaacatcttactagtagccaaaaatatagtcttatcaaa
taggaatgataaaatatagataattaaaattaagagaaaaatgcccttct
aaccccaccattctataattagaaatatgcacctgaggctatgtaataat
agtgtggattgtgtgtatgttataaactttatcagaactttagaatcatt
cataaaactgtataacatgcttaatataatggaacttgatttcatgctaa
tctagattgatctgttttcattttattagctaaaataggatattcttgta
tcaatgtagtattctcttgtataattggttacttattcttggccatttat
tttgtttcaagctttacatttcatacaccagattaaagatcactctatca
cagctttcatttccctctagtagattactgagtcaaaaaagacatgtttg
ggtctctcaaatatgttctgatgaatcactatgcccagtccctgctggca
caggtcattttcactcatcattggatggtgtatacccattttctcttcgg
tttggtatatttgaataaatagggctttggtggcatggagacaagactag
atgtgtcctcagaaggaggggtgtcagtgtcaacactcacagcagaaaga
ctgcaactgccatgcatgcttctgaagcttgcagagagtgacagacttcc
catccttttaagcctttcctaactgtccttcttcttgcctcacctcttta
tctccacttccagactcatgttgaactgtctgtccacaccatgcattttc
atctcatctctctcagcctctgcattgacatttgcagctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_99385491_99386375
seq2: B6Ng01-238N24.g_69_957 (reverse)

seq1  AGCTGCAAATGTCAATGCAGAGGCTGAGAGAGATGAGATG-AAATGCAT-  48
      |||||||||||||||||||||||||||||||||||||||| |||||||| 
seq2  AGCTGCAAATGTCAATGCAGAGGCTGAGAGAGATGAGATGAAAATGCATG  50

seq1  GTGTGGACAGACAGTTCAACATGAAGTCTGG-AGTGGAGATAAAGAGGTG  97
      ||||||||||||||||||||||| ||||||| ||||||||||||||||||
seq2  GTGTGGACAGACAGTTCAACATG-AGTCTGGAAGTGGAGATAAAGAGGTG  99

seq1  AGGCAAGAAGAAGGACAG-TAGGAAAGGCTTAAAAGGATGGGAAGTCTGT  146
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGGCAAGAAGAAGGACAGTTAGGAAAGGCTTAAAAGGATGGGAAGTCTGT  149

seq1  CACTCTCTGCAAGCTTCAGAAGCCTGCATGGCAGTTGCAGTCTTTCTGCT  196
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CACTCTCTGCAAGCTTCAGAAGCATGCATGGCAGTTGCAGTCTTTCTGCT  199

seq1  GTGAGTGTTGACACTGACACCCCTCCTTCTGAGGACACATCTAGTCTTGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGTTGACACTGACACCCCTCCTTCTGAGGACACATCTAGTCTTGT  249

seq1  CTCCATGCCACCAAAGCCCTATTTATTCAAATATACC-AACCGAAGAGAA  295
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTCCATGCCACCAAAGCCCTATTTATTCAAATATACCAAACCGAAGAGAA  299

seq1  AATGGGTATACACCATCCAATGATGAGTGAAAATGACCTGTGCCAGCAGG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTATACACCATCCAATGATGAGTGAAAATGACCTGTGCCAGCAGG  349

seq1  GACTGGGCATAGTGATTCATCAGAACATATTTGAGAGACCCAAACATGTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGCATAGTGATTCATCAGAACATATTTGAGAGACCCAAACATGTC  399

seq1  TTTTTTGACTCAGTAATCTACTAGAGGGAAATGAAAGCTGTGATAGAGTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGACTCAGTAATCTACTAGAGGGAAATGAAAGCTGTGATAGAGTG  449

seq1  ATCTTTAATCTGGTGTATGAAATGTAAAGCTTGAAACAAAATAAATGGCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTAATCTGGTGTATGAAATGTAAAGCTTGAAACAAAATAAATGGCC  499

seq1  AAGAATAAGTAACCAATTATACAAGAGAATACTACATTGATACAAGAATA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAAGTAACCAATTATACAAGAGAATACTACATTGATACAAGAATA  549

seq1  TCCTATTTTAGCTAATAAAATGAAAACAGATCAATCTAGATTAGCATGAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTTTAGCTAATAAAATGAAAACAGATCAATCTAGATTAGCATGAA  599

seq1  ATCAAGTTCCATTATATTAAGCATGTTATACAGTTTTATGAATGATTCTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTTCCATTATATTAAGCATGTTATACAGTTTTATGAATGATTCTA  649

seq1  AAGTTCTGATAAAGTTTATAACATACACACAATCCACACTATTATTACAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTGATAAAGTTTATAACATACACACAATCCACACTATTATTACAT  699

seq1  AGCCTCAGGTGCATATTTCTAATTATAGAATGGTGGGGTTAGAAGGGCAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCAGGTGCATATTTCTAATTATAGAATGGTGGGGTTAGAAGGGCAT  749

seq1  TTTTCTCTTAATTTTAATTATCTATATTTTATCATTCCTATTTGATAAGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTTAATTTTAATTATCTATATTTTATCATTCCTATTTGATAAGA  799

seq1  CTATATTTTTGGCTACTAGTAAGATGTTACATAGTTGGGAAGATAGCTAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTTTTGGCTACTAGTAAGATGTTACATAGTTGGGAAGATAGCTAC  849

seq1  CAGTAAATTGTTTGCTTTGCAATCAAGAAGACCTGAATTC  885
      ||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAATTGTTTGCTTTGCAATCAAGAAGACCTGAATTC  889