BAC Information

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BAC

Clone NameB6Ng01-239E06
Chromosome12 (Build37)
Map Location 69,288,030 - 69,418,806
singlet/doubletdoublet
Overlap genenone
Upstream geneMdga2, LOC100040745, LOC100040681
Downstream geneLOC100040696, LOC665967, LOC665973, Rps29, Ppil5, Rpl36al, Mgat2, 1110034A24Rik, 9330151L19Rik, Pole2, Klhdc1, Klhdc2, Sdccag1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-239E06.bB6Ng01-239E06.g
ACCGA049736GA049737
length1,009202
definitionB6Ng01-239E06.b B6Ng01-239E06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,288,030 - 69,288,576)(69,418,605 - 69,418,806)
sequence
gaattcagtctctaaagctaagttgacaatatgttcacagctttagctat
agaaattttaatattcctttctcagtaattcccataaaacaaagatataa
aatccagaacaatcatcaaagcagttggacagactatttaaacaatgctt
tcaaccaacctgttataattgatatttacataatttccatgtattaaata
ttattatattatataatataaatattacatatatctttctttaaatataa
gaggattataccagactgtattatatgtgagaattcaaaggagcctcaat
aaatctaagacttaaattcacagaagctcttgtctttcagcattagaatt
gagctaagatcatcagtaaatataatggggaaatagctacttaaggaata
tgaacttaaataaccaatcatcaggaaaaacaaaaacatgtagaattgaa
catataaatagagagaagagagagagagagagagagagagagagagagag
agagagagagagagagagagacttagcatgctacttcgcaaaatacaaac
acacagatcttaaaatgaagtatcatttcaaatttagagcagagaaggac
atgtaaaaaaaaagaatagcaaaacattctatgccatgtcagataaaaat
gtcaaatttgagtctaagaaactattttggaataaatattaataataggg
cagaagttaattaaattaaatgttgtatgttcaaaaggacatacaaagca
aacatgtgccctacaaaagaataaccaaatgtatatacatcagcaacaca
agttataaacaactagaaaaaacatacattatttaaaagtaagaaggaaa
aatgagtgatcatcatattttctacagttatggtcaattttaaattatct
aaaaccactattaaaaatatgtctgttacttgatgagatagaaaaatgtc
ctgaaaataaaatgtaccaaaatatcatgataatagaaattgtcaacaac
ctttctact

aaaatctgagtcacttgaaagaacagaaaggactttgtttttgccattgt
ggtaaattcttgatgcactggcagtcctacgtttagatactgaagcagca
caaaaacctgggtgtggtggcacagatgagtaactctatgtctttaaaaa
agtagccatacatttgagggagaatggggaggggtttttgtaaggattgg
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_69288030_69288576
seq2: B6Ng01-239E06.b_42_588

seq1  GAATTCAGTCTCTAAAGCTAAGTTGACAATATGTTCACAGCTTTAGCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTCTAAAGCTAAGTTGACAATATGTTCACAGCTTTAGCTAT  50

seq1  AGAAATTTTAATATTCCTTTCTCAGTAATTCCCATAAAACAAAGATATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTTAATATTCCTTTCTCAGTAATTCCCATAAAACAAAGATATAA  100

seq1  AATCCAGAACAATCATCAAAGCAGTTGGACAGACTATTTAAACAATGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGAACAATCATCAAAGCAGTTGGACAGACTATTTAAACAATGCTT  150

seq1  TCAACCAACCTGTTATAATTGATATTTACATAATTTCCATGTATTAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCAACCTGTTATAATTGATATTTACATAATTTCCATGTATTAAATA  200

seq1  TTATTATATTATATAATATAAATATTACATATATCTTTCTTTAAATATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATATTATATAATATAAATATTACATATATCTTTCTTTAAATATAA  250

seq1  GAGGATTATACCAGACTGTATTATATGTGAGAATTCAAAGGAGCCTCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTATACCAGACTGTATTATATGTGAGAATTCAAAGGAGCCTCAAT  300

seq1  AAATCTAAGACTTAAATTCACAGAAGCTCTTGTCTTTCAGCATTAGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAAGACTTAAATTCACAGAAGCTCTTGTCTTTCAGCATTAGAATT  350

seq1  GAGCTAAGATCATCAGTAAATATAATGGGGAAATAGCTACTTAAGGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAAGATCATCAGTAAATATAATGGGGAAATAGCTACTTAAGGAATA  400

seq1  TGAACTTAAATAACCAATCATCAGGAAAAACAAAAACATGTAGAATTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTAAATAACCAATCATCAGGAAAAACAAAAACATGTAGAATTGAA  450

seq1  CATATAAATAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAATAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  500

seq1  AGAGAGAGAGAGAGAGAGAGACTTAGCATGCTACTTCGCAAAATACA  547
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGACTTAGCATGCTACTTCGCAAAATACA  547


seq1: chr12_69418605_69418806
seq2: B6Ng01-239E06.g_68_269 (reverse)

seq1  TCCCAATCCTTACAAAAACCCCTCCCCATTCTCCCTCAAATGTATGGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATCCTTACAAAAACCCCTCCCCATTCTCCCTCAAATGTATGGCTA  50

seq1  CTTTTTTAAAGACATAGAGTTACTCATCTGTGCCACCACACCCAGGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTAAAGACATAGAGTTACTCATCTGTGCCACCACACCCAGGTTTT  100

seq1  TGTGCTGCTTCAGTATCTAAACGTAGGACTGCCAGTGCATCAAGAATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGCTTCAGTATCTAAACGTAGGACTGCCAGTGCATCAAGAATTTA  150

seq1  CCACAATGGCAAAAACAAAGTCCTTTCTGTTCTTTCAAGTGACTCAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATGGCAAAAACAAAGTCCTTTCTGTTCTTTCAAGTGACTCAGATT  200

seq1  TT  202
      ||
seq2  TT  202


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