MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-239K17
Chromosome	5 (Build37)	12 (Build37)
Map Location	89,924,879 - 89,925,170	43,000,552 - 43,001,654
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	Enam, Igj, Crlz1, Rufy3, Grsf1, Mobkl1a, Dck, Mkrn1-ps1, Slc4a4, Gc
Downstream gene	LOC622870, Npffr2, LOC631105, Adamts3, EG665733, Cox18, Ankrd17, Alb1, Afp
Link	Open Mouse BAC browser

Click to get alignment info.

name	Enam (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13801 MGI:1333772
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Igj (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16069 MGI:96493
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crlz1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65961 MGI:1919230
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rufy3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52822 MGI:106484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Grsf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231413 MGI:106479
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mobkl1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68473 MGI:1915723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dck (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13178 MGI:102726
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mkrn1-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:353327 MGI:2663191
definition	note : makorin, ring finger protein 1, pseudogene 1 pseudo : _no_value

name	Slc4a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54403 MGI:1927555
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14473 MGI:95669
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC622870 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622870
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins pseudo : _no_value

name	Npffr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104443 MGI:1860130
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC631105 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:631105
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 58 ESTs

name	Adamts3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330119 MGI:3045353
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665733 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665733 MGI:3643585
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 ESTs, 9 Proteins

name	Cox18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231430 MGI:2448532
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankrd17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81702 MGI:1932101
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Alb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11657 MGI:87991
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Afp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11576 MGI:87951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Enam (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365727 GeneID:13801 MGI:1333772
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : enamelin transcript_id : NM_017468.2

name	Igj (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23346415 GeneID:16069 MGI:96493
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : immunoglobulin joining chain transcript_id : NM_152839.1

name	Crlz1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12746429 GeneID:65961 MGI:1919230
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : charged amino acid rich leucine zipper 1 transcript_id : NM_023054.1

name	Rufy3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542481 GeneID:52822 MGI:106484
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RUN and FYVE domain containing 3 transcript_id : NM_027530.2

name	Grsf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385436 GeneID:231413 MGI:106479
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G-rich RNA sequence binding factor 1 transcript_id : NM_178700.3

name	Mobkl1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118600996 GeneID:68473 MGI:1915723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MOB1, Mps One Binder kinase activator-like 1A (yeast) transcript_id : NM_026735.2

name	Dck (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286803 GeneID:13178 MGI:102726
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : deoxycytidine kinase transcript_id : NM_007832.4

name	Slc4a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133922579 GeneID:54403 MGI:1927555
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 4 (anion exchanger), member 4 transcript_id : NM_018760.2

name	Gc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51172611 GeneID:14473 MGI:95669
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : group specific component transcript_id : NM_008096.1

name	Npffr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366674 GeneID:104443 MGI:1860130
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuropeptide FF receptor 2 transcript_id : NM_133192.3

name	LOC631105 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254002 GeneID:631105
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 58 ESTs product : similar to fimbriae-associated protein Fap1, transcript variant 1 transcript_id : XM_904722.3

name	Adamts3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487140 GeneID:330119 MGI:3045353
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADAM metallopeptidase with thrombospondin type 1 motif, 3 transcript_id : NM_001081401.1

name	EG665733 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253996 GeneID:665733 MGI:3643585
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 ESTs, 9 Proteins product : predicted gene, EG665733 transcript_id : XM_979078.2

name	Cox18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348223 GeneID:231430 MGI:2448532
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : COX18 cytochrome c oxidase assembly homolog (S. cerevisiae) transcript_id : NM_001033310.2

name	Ankrd17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40549394 GeneID:81702 MGI:1932101
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 17 transcript_id : NM_198010.2

name	Ankrd17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40549396 GeneID:81702 MGI:1932101
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 17 transcript_id : NM_030886.2

name	Alb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803359 GeneID:11657 MGI:87991
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : albumin 1 transcript_id : NM_009654.2

name	Afp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356981 GeneID:11576 MGI:87951
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alpha fetoprotein transcript_id : NM_007423.3

name	Enam (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8567350 CCDS:CCDS19400.1 GeneID:13801 MGI:1333772
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence ISS] [Evidence IEA] GO_function : GO:0030345 - structural constituent of tooth enamel [Evidence ISS] GO_process : GO:0030282 - bone mineralization [Evidence ISS]; GO:0042476 - odontogenesis [Evidence ISS]; GO:0001503 - ossification [Evidence IEA] codon_start : 1 product : enamelin protein_id : NP_059496.1

name	Igj (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346416 CCDS:CCDS19401.1 GeneID:16069 MGI:96493
definition	GO_function : GO:0003823 - antigen binding [Evidence ISS] GO_process : GO:0006959 - humoral immune response [Evidence ISS] codon_start : 1 exception : mismatches in translation note : immunoglobulin joining gene (not J region); J chain product : immunoglobulin J chain protein_id : NP_690052.1

name	Crlz1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12746430 CCDS:CCDS19402.1 GeneID:65961 MGI:1919230
definition	GO_component : GO:0005634 - nucleus [Evidence IPI] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007420 - brain development [Evidence IDA]; GO:0016568 - chromatin modification [Evidence IEA]; GO:0007275 - development [Evidence IEA] codon_start : 1 product : disrupter of silencing SAS10 protein_id : NP_075541.1

name	Rufy3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312036 CCDS:CCDS19403.1 GeneID:52822 MGI:106484
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : rap2 interacting protein x protein_id : NP_081806.1

name	Grsf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520107 CCDS:CCDS19404.1 GeneID:231413 MGI:106479
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IMP]; GO:0016331 - morphogenesis of embryonic epithelium [Evidence IMP] codon_start : 1 exception : mismatches in translation product : G-rich RNA sequence binding factor 1 protein_id : NP_848815.1

name	Mobkl1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62412947 GeneID:68473 MGI:1915723
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0019209 - kinase activator activity [Evidence ISS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0019900 - kinase binding [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0046777 - protein amino acid autophosphorylation [Evidence ISS] codon_start : 1 product : MOB1, Mps One Binder kinase activator-like 1A protein_id : NP_081011.1

name	Dck (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681141 CCDS:CCDS19405.1 GeneID:13178 MGI:102726
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004137 - deoxycytidine kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006139 - nucleobase, nucleoside, nucleotide and nucleic acid metabolism [Evidence IEA] codon_start : 1 product : deoxycytidine kinase protein_id : NP_031858.1

name	Slc4a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133922580 CCDS:CCDS19406.1 GeneID:54403 MGI:1927555
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS] GO_function : GO:0015380 - anion exchanger activity [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0008510 - sodium:bicarbonate symporter activity [Evidence ISS]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0015701 - bicarbonate transport [Evidence ISS]; GO:0006811 - ion transport [Evidence IEA]; GO:0006885 - regulation of pH [Evidence TAS]; GO:0006814 - sodium ion transport [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : pancreas sodium bicarbonate cotransporter product : solute carrier family 4 (anion exchanger), member 4 protein_id : NP_061230.2

name	Gc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51172612 CCDS:CCDS19407.1 GeneID:14473 MGI:95669
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence ISS] [Evidence IEA]; GO:0005386 - carrier activity [Evidence IEA]; GO:0005499 - vitamin D binding [Evidence IEA]; GO:0051183 - vitamin transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA]; GO:0042359 - vitamin D metabolism [Evidence IDA] codon_start : 1 note : vitamin D binding protein product : group specific component protein_id : NP_032122.1

name	Npffr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981539 CCDS:CCDS19408.1 GeneID:104443 MGI:1860130
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : neuropeptide NPFF receptor product : G protein-coupled receptor 74 protein_id : NP_573455.2

name	LOC631105 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254003 GeneID:631105
definition	codon_start : 1 product : similar to fimbriae-associated protein Fap1 isoform 1 protein_id : XP_909815.3

name	Adamts3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487141 GeneID:330119 MGI:3045353
definition	GO_component : GO:0031012 - extracellular matrix [Evidence IEA] GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0017074 - procollagen N-endopeptidase activity [Evidence IGI] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0051605 - proteolysis during protein maturation [Evidence IGI] codon_start : 1 product : a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 3 protein_id : NP_001074870.1

name	EG665733 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253997 GeneID:665733 MGI:3643585
definition	codon_start : 1 product : similar to initiation factor 4D protein_id : XP_984172.2

name	Cox18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677488 CCDS:CCDS19411.1 GeneID:231430 MGI:2448532
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_process : GO:0051205 - protein insertion into membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : COX18 cytochrome c oxidase assembly homolog protein_id : NP_001028482.1

name	Ankrd17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40549395 GeneID:81702 MGI:1932101
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0007492 - endoderm development [Evidence TAS]; GO:0006298 - mismatch repair [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : isoform b is encoded by transcript variant 2; ankyrin repeat domain containing protein FOE; gene trap ankyrin repeat product : ankyrin repeat domain protein 17 isoform b protein_id : NP_932127.2

name	Ankrd17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40549397 GeneID:81702 MGI:1932101
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0007492 - endoderm development [Evidence TAS]; GO:0006298 - mismatch repair [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : isoform a is encoded by transcript variant 1; ankyrin repeat domain containing protein FOE; gene trap ankyrin repeat product : ankyrin repeat domain protein 17 isoform a protein_id : NP_112148.2

name	Alb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859506 CCDS:CCDS19412.1 GeneID:11657 MGI:87991
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005576 - extracellular region [Evidence ISS]; GO:0043234 - protein complex [Evidence ISS] GO_function : GO:0016209 - antioxidant activity [Evidence ISS]; GO:0005386 - carrier activity [Evidence IEA]; GO:0005507 - copper ion binding [Evidence IEA] [Evidence ISS]; GO:0003677 - DNA binding [Evidence ISS]; GO:0008144 - drug binding [Evidence ISS]; GO:0005504 - fatty acid binding [Evidence ISS]; GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0019825 - oxygen binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0030170 - pyridoxal phosphate binding [Evidence ISS]; GO:0015643 - toxin binding [Evidence ISS] GO_process : GO:0009267 - cellular response to starvation [Evidence ISS]; GO:0019836 - hemolysis of host red blood cells [Evidence ISS]; GO:0051659 - maintenance of mitochondrion localization [Evidence ISS]; GO:0043066 - negative regulation of apoptosis [Evidence ISS]; GO:0043072 - negative regulation of non-apoptotic programmed cell death [Evidence ISS]; GO:0006810 - transport [Evidence ISS] [Evidence IEA] codon_start : 1 exception : mismatches in translation note : serum albumin product : albumin 1 protein_id : NP_033784.1

name	Afp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982513 CCDS:CCDS19413.1 GeneID:11576 MGI:87951
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0004566 - beta-glucuronidase activity [Evidence IEA]; GO:0005386 - carrier activity [Evidence IEA]; GO:0005507 - copper ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016151 - nickel ion binding [Evidence IEA] GO_process : GO:0001542 - ovulation (sensu Mammalia) [Evidence IMP]; GO:0042448 - progesterone metabolism [Evidence IMP]; GO:0019953 - sexual reproduction [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : alpha-foetoprotein product : alpha fetoprotein protein_id : NP_031449.2

name	LOC622870 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253995 GeneID:622870
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins product : similar to protein phosphatase 2A inhibitor-2 I-2PP2A pseudo : _no_value transcript_id : XR_031497.1

clone name	MSMg01-399B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291C14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-145F15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-276L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513P04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-213A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521H15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-277C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141I15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-290J21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-390E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117P13
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-239K17.b	B6Ng01-239K17.g
ACC	GA050033	GA050034
length	885	1,090
definition	B6Ng01-239K17.b	B6Ng01-239K17.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(89,924,879 - 89,925,170)	(43,000,552 - 43,001,654)
sequence	gaattcatccattgctgatgagagtgcaaacccatgcatccactatggaa atcagtgtggcagctcctcaggaagatgggaataagtctacctcaagatc cagctatgctactcttggacccttgggcccaaaggacattttatcctacc acatagacactagttcaaccatagtcattgctgctctattaataatactc ataaattagaaacaacctaaatgtctgtcaacagatgaatgaataaaaat agatgtacatttacacaatggaatattattaagtcattaaaaatgtaatc ctgaaattcacagataaatggatggaactagaaaaacaaaatcatcctat atgaggaaattcatgcagacaaatacaatgtatatttacttatatgtagt ttttagctgttaagtgaaggataaccaagttacaatcagaagaatcatag agactaggtatagagtaatacactaggggtagggacaaagagaaccccct aagaaagggaaatagaatatgtcaccactctagaggctgtggggccttgg agaatagagccaataaatgaagcagaccagtctcatgcaacaaccaactt tatttagagcctcagacaatttatacactgagggttaaaatgtcatgtaa gtaagtaatgttctcatgagtacaagctgcattcaatcacatggaaaacc cacatgtgggaaaacatgtttttccattagggcatagaagggatagttta aaccagtaatttaataacaatagcaagcagtaatctggagtaaactccta tccactgaacctcagaaaagcatgaaaacacattccaagaacaattctgt gttttaaagaaactgaggtacaagactctgtcttt	gaattcatagattatcagtaacttctctcagctaagtttgctccttaatt tctaatgctagaactttgacgtggtatggcattttagaaatgagtaactg gttctcagaatcctcctttgggaatccaacatatggtctaacacctccct tgcaatgtgttaattattgtcttggtgcttcagccaaaacttccatttta atattccattatgtctgtaatatttgcttataagtaaaatggatttcatg ctttggtattcttccctgcatccattttcttatttcctccctggaaagct tagttagaggtgtacaatgagaagaacaagaaacttctctgccctcaaat acactcagattaaaggagatgctcaaaggactgctcagcaattggtggaa gcagtattttctaacctgtaactcctgatgtgttagcacaccctctggtt gaattggcttgtaaactttcctccttgatagatttctgcgtgcagtagtt tcatgtggtggttatgcacacagcatctggggctagacaagctggatcaa atcgtatcgccccagtttacagttgtatgtccttgtttctttatctgtag aatgggggtaatagctgaattatgagacagatatgttgatagatggatag atagatagatagatagatagatagatagatagagcctcaggcattgcaaa tgttgtataaatagtagtaggcccagtagccatagttactattgctgcca tcattatttctatattgggtactaaatgaaacatttttgggtcatccttc tcatgataagatagtattcaaatgatagtcttcaaagtaaatgaaagttc tgtgactacccatttcacagggtatcctggtttagtgacaccatatctat taatatcttttctaccaaccagttgtttcagagttacctctgggttgggc acagggcctaaaacaaagcagacatggtcagagatagatgtattttgaca tccttgtctttagggtggataatttttaaactacatgattataatattag tatatcattattgatagtttaaatacttggcatagaagca
quality values	Open. Hide. 46 31 27 32 58 41 25 47 62 34 28 62 62 62 62 62 62 39 32 62 62 62 62 62 54 54 62 62 62 62 62 59 59 44 38 37 28 32 62 59 59 59 59 59 62 62 59 62 59 54 54 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 54 62 59 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 59 62 62 62 62 59 62 59 62 62 62 62 62 62 59 59 62 62 54 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 54 58 58 54 58 58 58 58 58 58 58 54 58 54 58 58 54 58 58 58 58 46 58 58 58 45 58 54 33 58 48 52 58 58 58 54 58 58 46 58 58 54 58 51 49 58 58 58 58 58 58 53 58 40 58 51 54 58 54 58 51 53 54 58 51 52 51 51 50 54 58 49 41 58 58 58 58 58 51 47 58 53 53 53 58 51 49 43 43 51 53 42 58 42 49 44 51 58 53 53 53 51 58 50 58 54 58 36 39 58 44 40 44 50 58 58 58 49 58 40 54 52 51 58 50 49 58 50 52 52 54 39 51 50 51 53 54 41 50 58 53 53 53 49 58 54 37 51 41 52 32 51 49 51 51 51 50 39 47 51 33 21 51 53 53 37 51 39 51 54 38 49 54 54 50 30 34 39 40 52 40 47 54 53 54 54 47 53 54 54 25 29 30 49 54 49 49 49 44 51 27 44 27 47 44 35 17 54 37 32 30 33 51 25 54 36 18 49 34 34 26 53 45 31 51 45 33 49 40 36 40 32 53 53 37 52 34 51 52 31 40 42 32 47 53 41 32 52 47 31 37 24 36 35 45 43 31 36 32 41 45 42 42 46 36 32 24 42 42 51 31 31 42 36 45 31 42 31 32 45 28 32 32 31 37 31 31 32 31 31 31 29 46 48 46 31 28 30 29 31 31 42 46 41 31 31 25 32 24 24 17 16 30 31 32 31 46 38 38 28 28 31 42 31 31 37 32 42 32 48 48 31 27 48 38 32 33 48 28 27 31 31 23 24 16 11 23 26 21 24 31 32 18 41 38 34 39 28 31 31 48 38	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr5_89924879_89925170
seq2: B6Ng01-239K17.b_660_929

seq1  ACAATTTATACCCTGAGGGTTTTAAGAAAGGCCAT---AG-GAGTAAAGT  46
      ||||||||||| |||||||||     ||| | |||   ||  ||||| ||
seq2  ACAATTTATACACTGAGGGTT----AAAATGTCATGTAAGTAAGTAATGT  46

seq1  TCTCATGAGTTGAAGCCCTATATAATCACAAGAACAAGTTGCACTGGGCA  96
      ||||||||||  ||||   ||  ||||||| | | ||    || || |  
seq2  TCTCATGAGTACAAGCTGCATTCAATCACATGGAAAACCCACA-TGTGGG  95

seq1  AAAACATTTTTTCCCCATAGAGCCATATA---CACAGGTAACACTAGCCA  143
      ||||||| |||| ||  ||| | |||| |    | || | | || ||  |
seq2  AAAACATGTTTTTCCATTAG-GGCATAGAAGGGATAGTTTAAACCAGTAA  144

seq1  GTT-GTGTGGGTTGTGTGGA-TAATCTAAAATAAACTCACTCCTCTCCAC  191
       ||  |     | |   | | ||||||  | |||    |||||| |||||
seq2  TTTAATAACAATAGCAAGCAGTAATCTGGAGTAA----ACTCCTATCCAC  190

seq1  CATACCTGGAAGAGGCACAAAAACACACATTCTAAGAACAATTCTGTTTT  241
         ||||   | | |||  |||  |||||||| |||||||||||||    
seq2  TGAACCTCAGAAAAGCATGAAA--ACACATTCCAAGAACAATTCTG----  234

seq1  TTTTTTTTTTTTTTTTTTTAAAGAAACTGAGGTCACAAGACTCTTGTCTT  291
                   | |||||||||||||||||| ||||||||| ||||||
seq2  -------------TGTTTTAAAGAAACTGAGGT-ACAAGACTC-TGTCTT  269

seq1  T  292
      |
seq2  T  270

seq1: chr12_43000552_43001654
seq2: B6Ng01-239K17.g_65_1154

seq1  GAATTCATAGATTATCAGTAACTTCTCTCAGCTAAGTTTGCTCCTTAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGATTATCAGTAACTTCTCTCAGCTAAGTTTGCTCCTTAATT  50

seq1  TCTAATGCTAGAACTTTGACGTGGTATGGCATTTTAGAAATGAGTAACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATGCTAGAACTTTGACGTGGTATGGCATTTTAGAAATGAGTAACTG  100

seq1  GTTCTCAGAATCCTCCTTTGGGAATCCAACATATGGTCTAACACCTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAGAATCCTCCTTTGGGAATCCAACATATGGTCTAACACCTCCCT  150

seq1  TGCAATGTGTTAATTATTGTCTTGGTGCTTCAGCCAAAACTTCCATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATGTGTTAATTATTGTCTTGGTGCTTCAGCCAAAACTTCCATTTTA  200

seq1  ATATTCCATTATGTCTGTAATATTTGCTTATAAGTAAAATGGATTTCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCATTATGTCTGTAATATTTGCTTATAAGTAAAATGGATTTCATG  250

seq1  CTTTGGTATTCTTCCCTGCATCCATTTTCTTATTTCCTCCCTGGAAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTATTCTTCCCTGCATCCATTTTCTTATTTCCTCCCTGGAAAGCT  300

seq1  TAGTTAGAGGTGTACAATGAGAAGAACAAGAAACTTCTCTGCCCTCAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGAGGTGTACAATGAGAAGAACAAGAAACTTCTCTGCCCTCAAAT  350

seq1  ACACTCAGATTAAAGGAGATGCTCAAAGGACTGCTCAGCAATTGGTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAGATTAAAGGAGATGCTCAAAGGACTGCTCAGCAATTGGTGGAA  400

seq1  GCAGTATTTTCTAACCTGTAACTCCTGATGTGTTAGCACACCCTCTGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATTTTCTAACCTGTAACTCCTGATGTGTTAGCACACCCTCTGGTT  450

seq1  GAATTGGCTTGTAAACTTTCCTCCTTGATAGATTTCTGCGTGCAGTAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGGCTTGTAAACTTTCCTCCTTGATAGATTTCTGCGTGCAGTAGTT  500

seq1  TCATGTGGTGGTTATGCACACAGCATCTGGGGCTAGACAAGCTGGATCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGGTGGTTATGCACACAGCATCTGGGGCTAGACAAGCTGGATCAA  550

seq1  ATCGTATCGCCCCAGTTTACAGTTGTATGTCCTTGTTTCTTTATCTGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTATCGCCCCAGTTTACAGTTGTATGTCCTTGTTTCTTTATCTGTAG  600

seq1  AATGGGGGTAATAGCTGAATTATGAGACAGATATGTTGATAGATGGATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGGTAATAGCTGAATTATGAGACAGATATGTTGATAGATGGATAG  650

seq1  ATAGATAGATAGATAGATAGATAGATAGATAGAGCCTCAGGCATTGCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGATAGATAGATAGATAGATAGATAGAGCCTCAGGCATTGCAAA  700

seq1  TGTTGTATAAATAGTAGTAGGCCCAGTAGCCATAGTTACTATTGCTGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTATAAATAGTAGTAGGCCCAGTAGCCATAGTTACTATTGCTGCCA  750

seq1  TCATTATTTCTATATTGGGTACTAAATGAAACATTTTTGGGTCATCCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATTTCTATATTGGGTACTAAATGAAACATTTTTGGGTCATCCTTC  800

seq1  TCATGATAAGATAGTATTCAAATGATAGTCTTCAAAGTAAATGAAAGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATAAGATAGTATTCAAATGATAGTCTTCAAAGTAAATGAAAGTTC  850

seq1  TGTGACTACCCATTTCACAGGGTATCCTGG-TTAGTGACACCATATCTAT  899
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGTGACTACCCATTTCACAGGGTATCCTGGTTTAGTGACACCATATCTAT  900

seq1  TAATATCTTTTCTACCAACCAGTTGTTTCAGAGTTACCTCT-GGTTGGGC  948
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TAATATCTTTTCTACCAACCAGTTGTTTCAGAGTTACCTCTGGGTTGGGC  950

seq1  ACAGGGCCT-AAACAAAGCAGACATGGTCAGGAGATAGATGTATTTTGAC  997
      ||||||||| |||||||||||||||||||| |||||||||||||||||||
seq2  ACAGGGCCTAAAACAAAGCAGACATGGTCA-GAGATAGATGTATTTTGAC  999

seq1  ATCCTTGTTCTTTAAGGGTTGGATAAATTTTTAAACCTAACATTGAATTT  1047
      ||||||| ||||||  || ||||| |||||||||||   ||| |||  ||
seq2  ATCCTTG-TCTTTA--GGGTGGAT-AATTTTTAAAC--TACA-TGA--TT  1040

seq1  ATAATATTTAAGTAATATCATAAATGAATAGTTTTAAATACTTGGGTATA  1097
      ||||||||  ||| ||||||| | || |||| ||||||||||| || |||
seq2  ATAATATT--AGT-ATATCATTATTG-ATAG-TTTAAATACTT-GGCATA  1084

seq1  GAAGCA  1103
      ||||||
seq2  GAAGCA  1090

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information