BAC Information

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BAC

Clone NameB6Ng01-240L05
Chromosome12 (Build37)
Map Location 118,703,149 - 118,704,265
singlet/doubletsinglet
Overlap genenone
Upstream geneRnu7-ps1, Ptprn2, LOC627375, LOC432713, LOC100042461
Downstream geneRapgef5, A930023M06Rik, Cdca7l, Dnahc11, Sp4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240L05.bB6Ng01-240L05.g
ACCGA050800GA050801
length1,111318
definitionB6Ng01-240L05.b B6Ng01-240L05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactcagtagttctgggtcctgtcttcccacaaagaaagtatttg
taggttttagcgaagacccaggaacaccccaactaatttcttaagtgtat
taaaatgaagcaagaattgcaccagagattataaaaaaaatctcatgagc
atgagaaaaatctcatgagcataaacacacaataagcctaaaaaacacag
ccagtatataaccaaattgattagtatatataaattaatgagctgtaact
ggagagataactcagtagttaagagcgcttgcaatccttggagaagaccc
agattcagttcctagcattcacacgtgctccacgaccatccataactcca
gttccaggggatccagtgaccccttgtggcctctgtaggcaccaggcaca
taaaacactaatacatagataatttaaacaagcaaacacatgtgagctga
gtggagatgcatagcttagatggcagattcaaggtttgtccttatattct
tggcttatgtgggctaccccataaaattaatacagacaaggatagaccag
ttgtagaaaatcctctaaagccattcattatactaaatgtatatgtagac
ttcctggtgcataggaaattccattttagcatatcaaatttgccaaaaag
aatttttaaaaaaactgatgatatcaaaattaagtaagactgtgtaagaa
tgctgtgctccgctgggtgtggtggcgcacacctttaatcccagcacttg
ggaggcagaggcaggtggatttctgagttcgagggcagcctggtacacag
agtgagttccaggacagccagggctatacagagaaaccctgtctcaaaaa
accaaaaaaaaaaaaaaaaaaaaagaatgctgtgctctaattctaaccct
tctgcacagggtgctacagtgggacttccatctttggaggtttttcttgc
ccatgaacagcaaatatagaagtgctcacataagatacaattttttactg
acagagcccatctcacaatgtctaccacaatgaacactttaggaaatgtt
gtaacatgtttgctaaaaaaatggagtatgaaagttacgtagatcacaca
tacggaaactc

tgggaactcttcagacggtataaatatgtcagagctctgagaaaggcaga
ggctgctgctccctgctcccctgttgctgctgttagtcaggtggtgatga
gcaaagaggcttggatatcctgagaaactcaacacccctaatcagcagga
agaagtctaatgagatggatccccttttccctctaaacttcttgctttcc
tactagtgttgggagattggaagggattggggtggagaaagatggttcgt
atccgtccccctgaaatacctcctagtatggatttcagtcctccttttgg
atatatagaggctcacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_118703149_118704265
seq2: B6Ng01-240L05.b_47_1157 (reverse)

seq1  GAGTTTCTGTTTGTGTTGATCTACGTAACTTTCATTTACTCATTTTTTTT  50
      ||||||| || |||| ||||||||||||||||||  |||||  |||||||
seq2  GAGTTTCCGTATGTG-TGATCTACGTAACTTTCA--TACTCCATTTTTTT  47

seq1  AACCAAAACATGTTACCACATTTCCTAAAGTGTTTCATTGTGGTAGACAT  100
      | |  ||||||||||| ||||||||||||||| |||||||||||||||||
seq2  AGC--AAACATGTTACAACATTTCCTAAAGTG-TTCATTGTGGTAGACAT  94

seq1  TGGTGAGAT-GGCTCTTGTCAGTAAAAAATTGTATC-TATGTGAGCACTT  148
      | ||||||| ||||| |||||||||||||||||||| |||||||||||||
seq2  T-GTGAGATGGGCTC-TGTCAGTAAAAAATTGTATCTTATGTGAGCACTT  142

seq1  CTATATTTGCTGTTCATGGGCAAG-AAAACCTCC-AAGATGGAAGTCCCA  196
      |||||||||||||||||||||||| ||||||||| |||||||||||||||
seq2  CTATATTTGCTGTTCATGGGCAAGAAAAACCTCCAAAGATGGAAGTCCCA  192

seq1  CTGTAGCACCCTGTGCAG-AGGGTTAGAATTAGAGCACAGCATTCTTTTT  245
      |||||||||||||||||| ||||||||||||||||||||||||||   ||
seq2  CTGTAGCACCCTGTGCAGAAGGGTTAGAATTAGAGCACAGCATTC---TT  239

seq1  TTTTTTTTTTTTTTTTTTTGGTTTTTTGAGACAGGGTTTCTCTGTATAGC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTGGTTTTTTGAGACAGGGTTTCTCTGTATAGC  289

seq1  CCTGGCTGTCCTGGAACTCACTCTGTGTACCAGGCTGCCCTCGAACTCAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGTCCTGGAACTCACTCTGTGTACCAGGCTGCCCTCGAACTCAG  339

seq1  AAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCGCCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCGCCA  389

seq1  CCACACCCAGCGGAGCACAGCATTCTTACACAGTCTTACTTAATTTTGAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCCAGCGGAGCACAGCATTCTTACACAGTCTTACTTAATTTTGAT  439

seq1  ATCATCAGTTTTTTTAAAAATTCTTTTTGGCAAATTTGATATGCTAAAAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCAGTTTTTTTAAAAATTCTTTTTGGCAAATTTGATATGCTAAAAT  489

seq1  GGAATTTCCTATGCACCAGGAAGTCTACATATACATTTAGTATAATGAAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTCCTATGCACCAGGAAGTCTACATATACATTTAGTATAATGAAT  539

seq1  GGCTTTAGAGGATTTTCTACAACTGGTCTATCCTTGTCTGTATTAATTTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTAGAGGATTTTCTACAACTGGTCTATCCTTGTCTGTATTAATTTT  589

seq1  ATGGGGTAGCCCACATAAGCCAAGAATATAAGGACAAACCTTGAATCTGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTAGCCCACATAAGCCAAGAATATAAGGACAAACCTTGAATCTGC  639

seq1  CATCTAAGCTATGCATCTCCACTCAGCTCACATGTGTTTGCTTGTTTAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAAGCTATGCATCTCCACTCAGCTCACATGTGTTTGCTTGTTTAAA  689

seq1  TTATCTATGTATTAGTGTTTTATGTGCCTGGTGCCTACAGAGGCCACAAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTATGTATTAGTGTTTTATGTGCCTGGTGCCTACAGAGGCCACAAG  739

seq1  GGGTCACTGGATCCCCTGGAACTGGAGTTATGGATGGTCGTGGAGCACGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCACTGGATCCCCTGGAACTGGAGTTATGGATGGTCGTGGAGCACGT  789

seq1  GTGAATGCTAGGAACTGAATCTGGGTCTTCTCCAAGGATTGCAAGCGCTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGCTAGGAACTGAATCTGGGTCTTCTCCAAGGATTGCAAGCGCTC  839

seq1  TTAACTACTGAGTTATCTCTCCAGTTACAGCTCATTAATTTATATATACT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTACTGAGTTATCTCTCCAGTTACAGCTCATTAATTTATATATACT  889

seq1  AATCAATTTGGTTATATACTGGCTGTGTTTTTTAGGCTTATTGTGTGTTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATTTGGTTATATACTGGCTGTGTTTTTTAGGCTTATTGTGTGTTT  939

seq1  ATGCTCATGAGATTTTTCTCATGCTCATGAGATTTTTTTTATAATCTCTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCATGAGATTTTTCTCATGCTCATGAGATTTTTTTTATAATCTCTG  989

seq1  GTGCAATTCTTGCTTCATTTTAATACACTTAAGAAATTAGTTGGGGTGTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAATTCTTGCTTCATTTTAATACACTTAAGAAATTAGTTGGGGTGTT  1039

seq1  CCTGGGTCTTCGCTAAAACCTACAAATACTTTCTTTGTGGGAAGACAGGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTCTTCGCTAAAACCTACAAATACTTTCTTTGTGGGAAGACAGGA  1089

seq1  CCCAGAACTACTGAGTGAATTC  1117
      ||||||||||||||||||||||
seq2  CCCAGAACTACTGAGTGAATTC  1111


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