BAC Information

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BAC

Clone NameB6Ng01-240O12
Chromosome12 (Build37)
Map Location 59,302,593 - 59,457,882
singlet/doubletdoublet
Overlap geneSstr1, Clec14a
Upstream geneAU021838, LOC100040044, Foxa1, 4921506M07Rik, EG217600, BC042761
Downstream geneLOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33, LOC665628, LOC238199, LOC665639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240O12.bB6Ng01-240O12.g
ACCGA050954GA050955
length374903
definitionB6Ng01-240O12.b B6Ng01-240O12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,302,593 - 59,302,966)(59,457,064 - 59,457,882)
sequence
ctaatagttcccacttaagttactactctttagtgaattttagcattttt
aatgaactaaacatgctaatttcccagttagtgaacagaggcgtaatttc
aatcagggaaaaaaatgtatttcttctccagtgactctgccatctgtcta
tcatcatcagggctacaactgtcagttaaatcaatgaaagtccaagggca
aagcccctaggccatctataatatgcacatgcttgctctagttcactggt
tctcaatattgcacaggggtggctaaaaccacaggaaatcacagatattt
acattataattcatagcagtagcaaaattacagttatcaagtagcaggaa
gtaatcttatagtgggggggggga
gaattccttccccaagagagctgccttgtttggcctcagtgggaaaggat
gtatctaaccctgcagagacttgatgtgctaaggtgggggataccaaggg
aaagcccactcttataggaccagggaaggggtacgggggagggattctat
gaaggggcagtgattgtaatgtaagaacatgaaaatgaatgaatgaatgg
aggactggctggcagtaacaggatgtttgatgtgtttgcatctgtctctg
gccatgctgtagcgcccactctcagcacaatgtggacaggtggctgtagt
aggctcccactcaactgagcagagtcactctcccatatctttcaaactgg
gatgcacagcgaacctctgaagtgatcagcccaaataaaaccttcgtctc
ataagtgtatccttccaggtgtttgtcacagtgagaagaaacataataac
atgagcttcatggacacctagaggacaaagttttaggaagatgagaaaca
tgagcaaaccctggggtgggctcagttggtgctgtagaaatcgcaggatg
tcagtgaggcagaacaggagtaggtgtaggagaaggaggtagaaactgag
gtgaggtggtgagaacttcagaaactaagagtgctactggacacaaatga
atgtttgttttgttttgagtggaccttttcacctgtaattaattttaaat
gtgtaaaagatgggctaagattctataaatatcttatatacccttatctt
tccatgatatcaatatactcaattatcctaacaatttttttcataactga
gaaatctatgctggtacaattattagtaaccctaagtagacatcatttat
aattttcaagtttgccactaatttccatcaattgtgctttagattatgac
caa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_59302593_59302966
seq2: B6Ng01-240O12.b_53_426

seq1  CTAATAGTTCCCACTTAAGTTACTACTCTTTAGTGAATTTTAGCATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAGTTCCCACTTAAGTTACTACTCTTTAGTGAATTTTAGCATTTTT  50

seq1  AATGAACTAAACATGCTAATTTCCCAGTTAGTGAACAGAGGCGTAATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACTAAACATGCTAATTTCCCAGTTAGTGAACAGAGGCGTAATTTC  100

seq1  AATCAGGGAAAAAAATGTATTTCTTCTCCAGTGACTCTGCCATCTGTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGGAAAAAAATGTATTTCTTCTCCAGTGACTCTGCCATCTGTCTA  150

seq1  TCATCATCAGGGCTACAACTGTCAGTTAAATCAATGAAAGTCCAAGGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATCAGGGCTACAACTGTCAGTTAAATCAATGAAAGTCCAAGGGCA  200

seq1  AAGCCCCTAGGCCATCTATAATATGCACATGCTTGCTCTAGTTCACTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCCTAGGCCATCTATAATATGCACATGCTTGCTCTAGTTCACTGGT  250

seq1  TCTCAATATTGCACAGGGGTGGCTAAAACCACAGGAAATCACAGATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATATTGCACAGGGGTGGCTAAAACCACAGGAAATCACAGATATTT  300

seq1  ACATTATAATTCATAGCAGTAGCAAAATTACAGTTATCAAGTAGCAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATAATTCATAGCAGTAGCAAAATTACAGTTATCAAGTAGCAGGAA  350

seq1  GTAATCTTATAGTGGGGGGGGGGA  374
      ||||||||||||||||||||||||
seq2  GTAATCTTATAGTGGGGGGGGGGA  374

seq1: chr12_59457064_59457882
seq2: B6Ng01-240O12.g_70_889 (reverse)

seq1  ATTGTACCAGCATAGATTTCTCAGTTATG-AAAAAATTGTTAGGATAATT  49
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATTGTACCAGCATAGATTTCTCAGTTATGAAAAAAATTGTTAGGATAATT  50

seq1  GAGTATATTGATATCATGGAAAGATAAGGGTATATAAGATATTTATAGAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATATTGATATCATGGAAAGATAAGGGTATATAAGATATTTATAGAA  100

seq1  TCTTAGCCCATCTTTTACACATTTAAAATTAATTACAGGTGAAAAGGTCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGCCCATCTTTTACACATTTAAAATTAATTACAGGTGAAAAGGTCC  150

seq1  ACTCAAAACAAAACAAACATTCATTTGTGTCCAGTAGCACTCTTAGTTTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAACAAAACAAACATTCATTTGTGTCCAGTAGCACTCTTAGTTTC  200

seq1  TGAAGTTCTCACCACCTCACCTCAGTTTCTACCTCCTTCTCCTACACCTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTCTCACCACCTCACCTCAGTTTCTACCTCCTTCTCCTACACCTA  250

seq1  CTCCTGTTCTGCCTCACTGACATCCTGCGATTTCTACAGCACCAACTGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTTCTGCCTCACTGACATCCTGCGATTTCTACAGCACCAACTGAG  300

seq1  CCCACCCCAGGGTTTGCTCATGTTTCTCATCTTCCTAAAACTTTGTCCTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCAGGGTTTGCTCATGTTTCTCATCTTCCTAAAACTTTGTCCTC  350

seq1  TAGGTGTCCATGAAGCTCATGTTATTATGTTTCTTCTCACTGTGACAAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGTCCATGAAGCTCATGTTATTATGTTTCTTCTCACTGTGACAAAC  400

seq1  ACCTGGAAGGATACACTTATGAGACGAAGGTTTTATTTGGGCTGATCACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGAAGGATACACTTATGAGACGAAGGTTTTATTTGGGCTGATCACT  450

seq1  TCAGAGGTTCGCTGTGCATCCCAGTTTGAAAGATATGGGAGAGTGACTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGTTCGCTGTGCATCCCAGTTTGAAAGATATGGGAGAGTGACTCT  500

seq1  GCTCAGTTGAGTGGGAGCCTACTACAGCCACCTGTCCACATTGTGCTGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTTGAGTGGGAGCCTACTACAGCCACCTGTCCACATTGTGCTGAG  550

seq1  AGTGGGCGCTACAGCATGGCCAGAGACAGATGCAAACACATCAAACATCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGCGCTACAGCATGGCCAGAGACAGATGCAAACACATCAAACATCC  600

seq1  TGTTACTGCCAGCCAGTCCTCCATTCATTCATTCATTTTCATGTTCTTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTGCCAGCCAGTCCTCCATTCATTCATTCATTTTCATGTTCTTAC  650

seq1  ATTACAATCACTGCCCCTTCATAGAATCCCTCCCCCGTACCCCTTCCCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAATCACTGCCCCTTCATAGAATCCCTCCCCCGTACCCCTTCCCTG  700

seq1  GTCCTATAAGAGTGGGCTTTCCCTTGGTATCCCCCACCTTAGCACATCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTATAAGAGTGGGCTTTCCCTTGGTATCCCCCACCTTAGCACATCAA  750

seq1  GTCTCTGCAGGGTTAGATACATCCTTTCCCACTGAGGCCAAACAAGGCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGCAGGGTTAGATACATCCTTTCCCACTGAGGCCAAACAAGGCAG  800

seq1  CTCTCTTGGGGAAGGAATTC  819
      ||||||||||||||||||||
seq2  CTCTCTTGGGGAAGGAATTC  820