BAC Information

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BAC

Clone NameB6Ng01-241F23
Chromosome12 (Build37)
Map Location 120,335,710 - 120,482,375
singlet/doubletdoublet
Overlap geneItgb8
Upstream geneDnahc11, Sp4, LOC100042993, LOC668611, EG668615, LOC620665, Sp8, Abcb5
Downstream geneEG627557, LOC100043011, 4732474O15Rik, LOC668632, LOC668633, Gm528, LOC100043017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241F23.bB6Ng01-241F23.g
ACCGA051303GA051304
length1,1081,134
definitionB6Ng01-241F23.b B6Ng01-241F23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,335,710 - 120,336,843)(120,481,234 - 120,482,375)
sequence
gaattcttacctgaggaatactgaatggctgagaagcacctgaaaaatgt
tcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaaaataaaaaattcaggtgacaaca
gatgctggagaggatgtggagaaagaggaacactcctccattgttggtgg
aattgcaagcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaactggacatagtactaccttagaccttatagcaaggaccatgattag
ttagagtccttgctcagaactccaggaatactttgcatatagtgcattat
tggaattccagaagcccatttccatgtgagctgctgccatgcctacatct
actagatggcagtctcccatagagccttctagtcactagcagatattttc
caccatctttgggaaaggctattgaaataaaaagtactgtcactgggtgt
tttctctttgtcaagaaaatttctgggatttgggatttgtctggattcta
attagacttgcctttgcccagcctccagtccccaaagcagaagggatagt
tgaattcaacctcctatggaatccccaataagaacttaaaagacaaatat
tcactgccaaaaaccagggctgtgttttttccccagagacaacatattaa
gaaagtgcagtccttttgtatacaagccttggatagaactccaggcctaa
aaataactctgacaggatttggctgtggagcatctgattctttctgggcc
tggcttatttcagaagtcacctcattagctttgctcagtgctatctcgac
catcccaacagtggtaccatctgtatttgagttacttttacacttttcta
attaaaatgatttaatacaaatattacagacagaagtatgtatatagatg
tgtccccacatcctgaccagccattcttcagttgaactttcaaatgacag
ttataagacaggtcagaaattctcatctatctacgttttctctggctcag
catgacagtatttcagatatgttggtaataacatttattatacctataca
cgtctatg
gaattcccataaaaatgaattgaaggctaagtaagcatcactttgctgca
tgctgaaaaaaagagaaaaataaaaggataagaggaagctggaataagac
tgtgcacagataaaatattccaaactaacatattttccacagaggaatcc
aacagcagtagctcccccttctcttctccacttccagtgttccagtgcaa
tgatgtataacagaaattctgaaagttagaaatttgattctaaatcttca
gcaattgatttacaaatgatggggtgattcaaactcttgtgagttagaca
cttctagatgtagtcctttgaatgaaaatggcccccacaggctcataggg
agtggcactattatgagatgtggtcttgttgaatgaagtatgtcactggt
agatgggctttttaaatattcaagtcaggcccagtggctcattctctttt
catactgccttcagatccagatatagaactctctgctaactctccagcac
catgtctgtctttatgccatcttgttacttgccattatgattaaacctct
gaactgtaagccaaccccacttaaatgtttttagagtcgccatggtcatt
aatgatatctcttcacagcagtagaggccctaattaagacaatcggccaa
tgtcgcctctgttctgtggccttattcaatcctgttttcccagccttatg
ctaattctgtgagctcccaacttcttcccattaaaaaaattaataaaagc
ttataacatttacagtactattctattacttgaaatcaaaagttatcatt
aatgtgtggtggtccaagaaaatcagagctctgattcttgcatgcccaag
aattcttaaagaaataaagctattctctttgcctggttgggtttaatttc
tacatttgtacaaggagaacaactgagcagtatacatgtatgctggtccc
aaaataaagagttttcaaatcaaataacggtggcctactctagtttctgg
aaatttctctaggaagaacttagccattaactgatgttttctaagctatc
atggattcttgtttcagaaaaataaatagcaagtcataaccttatcatct
tgccatctactgtatgataacaaggtcattcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_120335710_120336843
seq2: B6Ng01-241F23.b_47_1154

seq1  GAATTCTTACCTGAGGAATACTGAATGGCTGAGAAGCACCTGAAAAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACCTGAGGAATACTGAATGGCTGAGAAGCACCTGAAAAATGT  50

seq1  TCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATT  100

seq1  CCACCTCACACCAGTCAGAATGGCTAAAATAAAAAATTCAGGTGACAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCACACCAGTCAGAATGGCTAAAATAAAAAATTCAGGTGACAACA  150

seq1  GATGCTGGAGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGGAGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGG  200

seq1  AATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAG  250

seq1  AAAACTGGACATAGTACTACCTTAGACCTTATAGCAAGGACCATGATTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGGACATAGTACTACCTTAGACCTTATAGCAAGGACCATGATTAG  300

seq1  TTAGAGTCCTTGCTCAGAACTCCAGGAATACTTTGCATATAGTGCATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGTCCTTGCTCAGAACTCCAGGAATACTTTGCATATAGTGCATTAT  350

seq1  TGGAATTCCAGAAGCCCATTTCCATGTGAGCTGCTGCCATGCCTACATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTCCAGAAGCCCATTTCCATGTGAGCTGCTGCCATGCCTACATCT  400

seq1  ACTAGATGGCAGTCTCCCATAGAGCCTTCTAGTCACTAGCAGATATTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGATGGCAGTCTCCCATAGAGCCTTCTAGTCACTAGCAGATATTTTC  450

seq1  CACCATCTTTGGGAAAGGCTATTGAAATAAAAAGTACTGTCACTGGGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCTTTGGGAAAGGCTATTGAAATAAAAAGTACTGTCACTGGGTGT  500

seq1  TTTCTCTTTGTCAAGAAAATTTCTGGGATTTGGGATTTGTCTGGATTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTTGTCAAGAAAATTTCTGGGATTTGGGATTTGTCTGGATTCTA  550

seq1  ATTAGACTTGCCTTTGCCCAGCCTCCAGTCCCCAAAGCAGAAGGGATAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGACTTGCCTTTGCCCAGCCTCCAGTCCCCAAAGCAGAAGGGATAGT  600

seq1  TGAATTCAACCTCCTATGGAATCCCCAATAAGAACTTAAAAGACAAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCAACCTCCTATGGAATCCCCAATAAGAACTTAAAAGACAAATAT  650

seq1  TCACTGCCAAAAACCAGGGCTGTGTTTTTTCCCCAGAGACAACATATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGCCAAAAACCAGGGCTGTGTTTTTTCCCCAGAGACAACATATTAA  700

seq1  GAAAGTGCAGTCCTTTTGTATACAAGCCTTGGATAGAACTCCAGGCCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGCAGTCCTTTTGTATACAAGCCTTGGATAGAACTCCAGGCCTAA  750

seq1  AAATAACTCTGACAGGATTTGGCTGTGGAGCATCTGATTCTTTCTGGGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACTCTGACAGGATTTGGCTGTGGAGCATCTGATTCTTTCTGGGCC  800

seq1  TGGCTTATTTCAGAAGTCACCTCATTAGCTTTGCTCAGTGCTATCTCGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTATTTCAGAAGTCACCTCATTAGCTTTGCTCAGTGCTATCTCGAC  850

seq1  CATCCCAACAGTGGTACCATCTGTATTTGAGTTACTTTTACACTTTTCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCAACAGTGGTACCATCTGTATTTGAGTTACTTTTACACTTTTCTA  900

seq1  ATTAAAATGATTTAATAACAAAATATTACAAGACAGAAGGTATGTTATAA  950
      |||||||||||||||||   ||||||||| |||||||| ||||| ||| |
seq2  ATTAAAATGATTTAATA--CAAATATTAC-AGACAGAA-GTATG-TAT-A  944

seq1  TAGATGGTTGTCCCCCACCATCCTGACCAAGCCATTCTTTCAGTTTGAAC  1000
      ||||||  |||||||   |||||||||| |||||||| ||||| ||||||
seq2  TAGATG--TGTCCCC--ACATCCTGACC-AGCCATTC-TTCAG-TTGAAC  987

seq1  TTTTCAAATGACAAGTTAT-AGACAGGGTCAAGAAATTCTCATCCTTAAT  1049
       ||||||||||| |||||| ||||| |||| |||||||||||||    ||
seq2  -TTTCAAATGAC-AGTTATAAGACA-GGTC-AGAAATTCTCATC---TAT  1030

seq1  CTTACGTTTTCCTCTGGCTCAGCAATGACCAGTATTTCAGATATGTTGGG  1099
      | |||||||| |||||||||||| |||| |||||||||||||||||||| 
seq2  C-TACGTTTT-CTCTGGCTCAGC-ATGA-CAGTATTTCAGATATGTTGGT  1076

seq1  TATATACATTTATTATTACTATTACACGTCCTATG  1134
       ||| |||||||||||  ||| ||||||| |||||
seq2  AATA-ACATTTATTATACCTA-TACACGT-CTATG  1108

seq1: chr12_120481234_120482375
seq2: B6Ng01-241F23.g_66_1199 (reverse)

seq1  GAAGAATGGAACTAG-TATCATATAAAGGTAGATGGC-AGATGATTAAGG  48
      ||||||| || || | ||||||| |   ||||||||| |||||| |||||
seq2  GAAGAAT-GACCTTGTTATCATACA---GTAGATGGCAAGATGA-TAAGG  45

seq1  TTATGAACTGCTATT--ATTTTCTGAAACAAGATCCCATGATTAAGCTTA  96
      ||||||  |||||||   |||||||||||||||  |||||||  ||||||
seq2  TTATGACTTGCTATTTATTTTTCTGAAACAAGAATCCATGAT--AGCTTA  93

seq1  GAAAACATTCAGTTAAATGGCTAAGTTCTTCCCTAGAGAAATTTCCAGAA  146
      ||||||| |||||| ||||||||||||||| |||||||||||||||||||
seq2  GAAAACA-TCAGTT-AATGGCTAAGTTCTT-CCTAGAGAAATTTCCAGAA  140

seq1  ACTAGAGTAGGCCACCGTTTATTTGATTTTGAAAACTCTTTATTTTGGGA  196
      ||||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  ACTAGAGTAGGCCACCG-TTATTTGA-TTTGAAAACTCTTTATTTTGGGA  188

seq1  CCAGCATACATGTATACTGCTCAGTTGTTCTCCTTGTACAAATGTAGAAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATACATGTATACTGCTCAGTTGTTCTCCTTGTACAAATGTAGAAA  238

seq1  TTAAACCCAACCAGGCAAAGAGAATAGCTTTATTTCTTTAAGAATTCTTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCCAACCAGGCAAAGAGAATAGCTTTATTTCTTTAAGAATTCTTG  288

seq1  GGCATGCAAGAATCAGAGCTCTGATTTTCTTGGACCACCACACATTAATG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCAAGAATCAGAGCTCTGATTTTCTTGGACCACCACACATTAATG  338

seq1  ATAACTTTTGATTTCAAGTAATAGAATAGTACTGTAAATGTTATAAGCTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTTTGATTTCAAGTAATAGAATAGTACTGTAAATGTTATAAGCTT  388

seq1  TTATTAATTTTTTTAATGGGAAGAAGTTGGGAGCTCACAGAATTAGCATA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATTTTTTTAATGGGAAGAAGTTGGGAGCTCACAGAATTAGCATA  438

seq1  AGGCTGGGAAAACAGGATTGAATAAGGCCACAGAACAGAGGCGACATTGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGGAAAACAGGATTGAATAAGGCCACAGAACAGAGGCGACATTGG  488

seq1  CCGATTGTCTTAATTAGGGCCTCTACTGCTGTGAAGAGATATCATTAATG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATTGTCTTAATTAGGGCCTCTACTGCTGTGAAGAGATATCATTAATG  538

seq1  ACCATGGCGACTCTAAAAACATTTAAGTGGGGTTGGCTTACAGTTCAGAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGCGACTCTAAAAACATTTAAGTGGGGTTGGCTTACAGTTCAGAG  588

seq1  GTTTAATCATAATGGCAAGTAACAAGATGGCATAAAGACAGACATGGTGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATCATAATGGCAAGTAACAAGATGGCATAAAGACAGACATGGTGC  638

seq1  TGGAGAGTTAGCAGAGAGTTCTATATCTGGATCTGAAGGCAGTATGAAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGTTAGCAGAGAGTTCTATATCTGGATCTGAAGGCAGTATGAAAA  688

seq1  GAGAATGAGCCACTGGGCCTGACTTGAATATTTAAAAAGCCCATCTACCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGAGCCACTGGGCCTGACTTGAATATTTAAAAAGCCCATCTACCA  738

seq1  GTGACATACTTCATTCAACAAGACCACATCTCATAATAGTGCCACTCCCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACATACTTCATTCAACAAGACCACATCTCATAATAGTGCCACTCCCT  788

seq1  ATGAGCCTGTGGGGGCCATTTTCATTCAAAGGACTACATCTAGAAGTGTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCCTGTGGGGGCCATTTTCATTCAAAGGACTACATCTAGAAGTGTC  838

seq1  TAACTCACAAGAGTTTGAATCACCCCATCATTTGTAAATCAATTGCTGAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCACAAGAGTTTGAATCACCCCATCATTTGTAAATCAATTGCTGAA  888

seq1  GATTTAGAATCAAATTTCTAACTTTCAGAATTTCTGTTATACATCATTGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGAATCAAATTTCTAACTTTCAGAATTTCTGTTATACATCATTGC  938

seq1  ACTGGAACACTGGAAGTGGAGAAGAGAAGGGGGAGCTACTGCTGTTGGAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAACACTGGAAGTGGAGAAGAGAAGGGGGAGCTACTGCTGTTGGAT  988

seq1  TCCTCTGTGGAAAATATGTTAGTTTGGAATATTTTATCTGTGCACAGTCT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGTGGAAAATATGTTAGTTTGGAATATTTTATCTGTGCACAGTCT  1038

seq1  TATTCCAGCTTCCTCTTATCCTTTTATTTTTCTCTTTTTTTCAGCATGCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAGCTTCCTCTTATCCTTTTATTTTTCTCTTTTTTTCAGCATGCA  1088

seq1  GCAAAGTGATGCTTACTTAGCCTTCAATTCATTTTTATGGGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTGATGCTTACTTAGCCTTCAATTCATTTTTATGGGAATTC  1134