BAC Information

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BAC

Clone NameB6Ng01-243A24
Chromosome12 (Build37)
Map Location 9,733,804 - 9,734,722
singlet/doubletsinglet
Overlap genenone
Upstream genePum2, F730043H23, Sdc1, Laptm4a, Matn3, Wdr35, Ttc32, LOC633030, LOC100042238, Osr1
Downstream geneLOC382567, Nt5c1b, Rdh14, LOC238074
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243A24.bB6Ng01-243A24.g
ACCGA052547GA052548
length1,184923
definitionB6Ng01-243A24.b B6Ng01-243A24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacaagtgaaatcgtttattactatttctttgcaattggcttta
ataacatccactagtttatccgggttgtcatacatatcatacatgatgga
atttcatatttatcccattttctttccctctttacagcaatatagtattg
gatacatatagtaccctttaagtttatcaattcattcatagacaggatat
ttttgagtactattactttatacatatgaatagagacatcctttttggat
actcattaaagatttttgaaattgaacctagggatgagattgctggactc
tgtggtggtcctacttaaagtatcctgagaaatcactatattgctttcca
agtcaaccccactatcttatcactgtattgacagtgtttcagggtacttt
ttttcctctgtatcctcatcgacagataatcaatctactcagtttgggct
ttctagtggtttcaattgcatctctctgattattatagatgtgacatttt
taatatataccttttggctacattgataaaatttgtatctattctttaaa
aaaaatgtcttatctagtcttttgtcacctttaataggaatattcccttt
tgtggcattgagtagtttgagtgcattgtgtattttggatactgaacaag
ataatctaaaatattttaatcaaaaggaacaaagctgaagagaaaacaat
cctggccttcaaaatatattacaaagctgatataatcaaaatatctcagg
ccttttcacaaaaacagagtcccatatgacccatataacaggagagacta
ggggaaaaaaggagcagaaaaaatacatagttatagtcacttaaatatta
acaaagatgcaaacacaacatagaattggaataaataacattctattaaa
caatggttttataagatttggatacaatttcagaaaagagtgaaagttag
cctgatctaattgctttttcaaaatcaacccccaaaaattaatgactttg
aataaacccggaaatgtgattagacataaatggagggccaaaatcactgc
tttgaaaattcgggaatttataccaagttagacctaactagaccaaatgc
aattgattacgctcaaccttaaatcctgctaacaagtatagatcagtaga
taatcacggtcaacattgagacccgtggggtgac
gaattctgatagctgtggggaaaacaaaacaaaacaaaacaacaaaacaa
aacaaaactctgaggaaaacagaggaataatgatcccaaaaaaaggatgt
tatattttagagatactagttgtggtctttttcgttaaagtttgtgatca
tttgggagtacggaggggacacatgtgtgtggggcgaggctttaatcagc
aggagaaggctgaagctttgtttcagttgggctgactccagcggagatta
aggagggacattaaggtttgttgtaaaacaattagtggcttaggggaata
ttcagtcctagtttttaattttactaaacatcaagcaaaattccaaaagt
aacagcaaagtaagcaaacctcatccaaccttaagacgctcatatttgta
tttgcacagataactgatgctcgccttgctgggccacagtatagagacta
cctacttacagacattgagttcttgctggcgctcctgaacattctgggag
tagaggcacgattagatgcaggcaatcatctgtttctgtgttcccagata
cctataaggcttaattaatgataaaataaattatcttagaaatttcagag
atttttagacaagcaattagtatgagaatagaatttttactattcctttt
taaatttactcactctccacacacaaatgaacagactatgtgaaaacctg
aaaaacaaggttgttttttgttttgttttgttttgttttgttctgttttg
ttttgttttgggttgttttgagcgtagcagcagcagagatggcgtagtag
cgtatccttgctacacaggtttctctaccttagtcccttccaaagtccat
cagatagaaatataaaaattgtccacatagaatgttccccaaacctggct
tcattcttctaactattatctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_9733804_9734722
seq2: B6Ng01-243A24.g_64_986

seq1  GAATTCTGATAGCTGTGGGGAAAACAAAACAAAACAAAACAACAAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATAGCTGTGGGGAAAACAAAACAAAACAAAACAACAAAACAA  50

seq1  AACAAAACTCTGAGGAAAACAGAGGAATAATGATCCCAAAAAAAGGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACTCTGAGGAAAACAGAGGAATAATGATCCCAAAAAAAGGATGT  100

seq1  TATATTTTAGAGATACTAGTTGTGGTCTTTTTCGTTAAAGTTTGTGATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTAGAGATACTAGTTGTGGTCTTTTTCGTTAAAGTTTGTGATCA  150

seq1  TTTGGGAGTACGGAGGGGACACATGTGTGTGGGGCGAGGCTTTAATCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGAGTACGGAGGGGACACATGTGTGTGGGGCGAGGCTTTAATCAGC  200

seq1  AGGAGAAGGCTGAAGCTTTGTTTCAGTTGGGCTGACTCCAGCGGAGATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAGGCTGAAGCTTTGTTTCAGTTGGGCTGACTCCAGCGGAGATTA  250

seq1  AGGAGGGACATTAAGGTTTGTTGTAAAACAATTAGTGGCTTAGGGGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGACATTAAGGTTTGTTGTAAAACAATTAGTGGCTTAGGGGAATA  300

seq1  TTCAGTCCTAGTTTTTAATTTTACTAAACATCAAGCAAAATTCCAAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCCTAGTTTTTAATTTTACTAAACATCAAGCAAAATTCCAAAAGT  350

seq1  AACAGCAAAGTAAGCAAACCTCATCCAACCTTAAGACGCTCATATTTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAAAGTAAGCAAACCTCATCCAACCTTAAGACGCTCATATTTGTA  400

seq1  TTTGCACAGATAACTGATGCTCGCCTTGCTGGGCCACAGTATAGAGACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACAGATAACTGATGCTCGCCTTGCTGGGCCACAGTATAGAGACTA  450

seq1  CCTACTTACAGACATTGAGTTCTTGCTGGCGCTCCTGAACATTCTGGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTACAGACATTGAGTTCTTGCTGGCGCTCCTGAACATTCTGGGAG  500

seq1  TAGAGGCACGATTAGATGCAGGCAATCATCTGTTTCTGTGTTCCCAGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGCACGATTAGATGCAGGCAATCATCTGTTTCTGTGTTCCCAGATA  550

seq1  CCTATAAGGCTTAATTAATGATAAAATAAATTATCTTAGAAATTTCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAAGGCTTAATTAATGATAAAATAAATTATCTTAGAAATTTCAGAG  600

seq1  ATTTTTAGACAAGCAATTAGTATGAGAATAGAATTTTTACTATTCCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAGACAAGCAATTAGTATGAGAATAGAATTTTTACTATTCCTTTT  650

seq1  TAAATTTACTCACTCTCCACACACAAATGAACAGACTATGTGAAAACCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTACTCACTCTCCACACACAAATGAACAGACTATGTGAAAACCTG  700

seq1  AAAAACAAGGTTGTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG  750
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAAAACAAGGTTGTTTTTTGTTTTGTTTTGTTTTGTTTTGTTCTGTTTTG  750

seq1  TTTTGTTTTGTTTTGTTTTGTTTTTGGACAGCATGAGTG-----CTAGTA  795
      ||||||||||  ||||||||    | | |||||  || |      |||||
seq2  TTTTGTTTTGGGTTGTTTTGAGCGTAG-CAGCAGCAGAGATGGCGTAGTA  799

seq1  TGCTATCCTTGCTACACAGGTTTCTCTACCTTAGTCCCCTCCAAAG-CCA  844
         ||||||||||||||||||||||||||||||||||| ||||||| |||
seq2  GCGTATCCTTGCTACACAGGTTTCTCTACCTTAGTCCCTTCCAAAGTCCA  849

seq1  TCAGATAGAAATAT-AAAATTGTCCACAATAGGAATGTTCCCCAAACCTG  893
      |||||||||||||| |||||||||||| ||| ||||||||||||||||||
seq2  TCAGATAGAAATATAAAAATTGTCCAC-ATA-GAATGTTCCCCAAACCTG  897

seq1  GCTTCATTCTTCTAACTATTATCTGC  919
      ||||||||||||||||||||||||||
seq2  GCTTCATTCTTCTAACTATTATCTGC  923