BAC Information

Click to search

BAC

Clone NameB6Ng01-243E22
Chromosome12 (Build37)
Map Location 15,567,914 - 15,569,054
singlet/doubletsinglet
Overlap genenone
Upstream geneMap1lc3-ps7, LOC668492, LOC100042426
Downstream geneLOC217409, Trib2, LOC100043268, EG432636, LOC100043273, Lpin1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243E22.bB6Ng01-243E22.g
ACCGA052728GA052729
length1,1431,194
definitionB6Ng01-243E22.b B6Ng01-243E22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgagtcatatgcatgaaaatcatagctttcaaagctgaaagat
ctgttcagaattcatgtgtgcctgtagactgactttgaatgttctccctc
cattcaggaagctacataacattatatagatgatgatgatgatgagagga
gagagagagagagagattggcagaggtcactactcacttttaagccctag
ggtcctcatgacatagatgtaatacagctgtttaaactcctattaccaaa
tgagcaaagggaaggcctggggttcgccttctccccattgacacaggctg
aatgatatttccaaacacattcatactctgattctttaaagctctgaata
tgtcgtgttgagtagccaagaggaggctttggtgatgtgatgacactaag
tcgtttgaataggggaaattagattctctaggaagctcaaatctaacaca
aatgtccttaggaaagggagacaggaagactagagaagatactgaaggct
gaggtcagcaacatgacactcgtaaaagataggaaaaatgatttttctac
agtgccttctggaagagcatggcgctgtagagactatgggtctatctttt
caagctgatgttaaacttgaggcctccacaaagagacaattttgtgtgtg
tgtgtgtgttttaaccttatggtagaacaacattaagaaactcataaagc
aagggacacactcaaaaccacaaaattagcttagggataaaaatggtcaa
agctagaattctcttgaaggaaactattcatactggaatcatcacattaa
attattaaacattacttctttctaaatttgctaccatatacccacctaat
atgaataaatgatggctatttcataaaacactagagataacatattatct
taagtcctaaaacatgataggataaaaaaatagtcctttaaagagacagc
atggcttcccttatttcttgaactgggatttccttatgatttgcagagac
atgcaaagatgatagacacttcgattctcctagctgggtccatgtctatc
ttgagtgcctttcagtcacatgaccatgctcagtcttggtcaagtggaag
gcttaaaggttgtctagagacaccaaagaaccaagcatgaaaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacgaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatggatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatcttcaaccct
atagtggaacacattatgaactaaccagtacccctgagctcttgacttct
agctgcattatgtattcaaagatgactagttcgtcatcactggtaaagag
agtcccatttgacacgcagaacttttggtgaccggtacagggtacgccta
agtctaaggggggagaacgtggagagggttataggcgattactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_15567914_15569054
seq2: B6Ng01-243E22.b_46_1188 (reverse)

seq1  TTTTCATGCTTGG-TCTTTGGTTCTCTCTAGACAACCTTTA--GCTTTCA  47
      ||||||||||||| ||||||| | |||||||||||||||||   ||| ||
seq2  TTTTCATGCTTGGTTCTTTGG-TGTCTCTAGACAACCTTTAAGCCTTCCA  49

seq1  CTTGACC-AGACTGAGCATGGTCATGTGACTGAAAAGGCACTTCAAGATA  96
      ||||||| |||||||||||||||||||||||| |||||||| ||||||||
seq2  CTTGACCAAGACTGAGCATGGTCATGTGACTG-AAAGGCAC-TCAAGATA  97

seq1  GACATGGA-CCAGCTAGGAGGAATTCGAAGTGTCTATCATCTTTGCATGT  145
      |||||||| |||||||||||  | ||||||||||||||||||||||||| 
seq2  GACATGGACCCAGCTAGGAG--AATCGAAGTGTCTATCATCTTTGCATG-  144

seq1  TCTCTGCAAATCATAAGG-AATCCCAGTTCAAGAAATAAGGAAGCCCATG  194
      |||||||||||||||||| |||||||||||||||||||||| |  |||||
seq2  TCTCTGCAAATCATAAGGAAATCCCAGTTCAAGAAATAAGGGAAGCCATG  194

seq1  CTGTCTCTTT-AAGGACTA-TTTTTTATCCTATCATGTTTTAGGACTTAA  242
      |||||||||| |||||||| ||||||||||||||||||||||||||||||
seq2  CTGTCTCTTTAAAGGACTATTTTTTTATCCTATCATGTTTTAGGACTTAA  244

seq1  GATAATATGTTATCTCTAGTGTTTTATGAAATAGCCATCATTTATTCATA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATATGTTATCTCTAGTGTTTTATGAAATAGCCATCATTTATTCATA  294

seq1  TTAGGTGGGTATATGGTAGCAAATTTAGAAAGAAGTAATGTTTAATAATT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTGGGTATATGGTAGCAAATTTAGAAAGAAGTAATGTTTAATAATT  344

seq1  TAATGTGATGATTCCAGTATGAATAGTTTCCTTCAAGAGAATTCTAGCTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGATGATTCCAGTATGAATAGTTTCCTTCAAGAGAATTCTAGCTT  394

seq1  TGACCATTTTTATCCCTAAGCTAATTTTGTGGTTTTGAGTGTGTCCCTTG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATTTTTATCCCTAAGCTAATTTTGTGGTTTTGAGTGTGTCCCTTG  444

seq1  CTTTATGAGTTTCTTAATGTTGTTCTACCATAAGGTTAAAACACACACAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGAGTTTCTTAATGTTGTTCTACCATAAGGTTAAAACACACACAC  494

seq1  ACACACAAAATTGTCTCTTTGTGGAGGCCTCAAGTTTAACATCAGCTTGA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAAAATTGTCTCTTTGTGGAGGCCTCAAGTTTAACATCAGCTTGA  544

seq1  AAAGATAGACCCATAGTCTCTACAGCGCCATGCTCTTCCAGAAGGCACTG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAGACCCATAGTCTCTACAGCGCCATGCTCTTCCAGAAGGCACTG  594

seq1  TAGAAAAATCATTTTTCCTATCTTTTACGAGTGTCATGTTGCTGACCTCA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAATCATTTTTCCTATCTTTTACGAGTGTCATGTTGCTGACCTCA  644

seq1  GCCTTCAGTATCTTCTCTAGTCTTCCTGTCTCCCTTTCCTAAGGACATTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCAGTATCTTCTCTAGTCTTCCTGTCTCCCTTTCCTAAGGACATTT  694

seq1  GTGTTAGATTTGAGCTTCCTAGAGAATCTAATTTCCCCTATTCAAACGAC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAGATTTGAGCTTCCTAGAGAATCTAATTTCCCCTATTCAAACGAC  744

seq1  TTAGTGTCATCACATCACCAAAGCCTCCTCTTGGCTACTCAACACGACAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTCATCACATCACCAAAGCCTCCTCTTGGCTACTCAACACGACAT  794

seq1  ATTCAGAGCTTTAAAGAATCAGAGTATGAATGTGTTTGGAAATATCATTC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAGCTTTAAAGAATCAGAGTATGAATGTGTTTGGAAATATCATTC  844

seq1  AGCCTGTGTCAATGGGGAGAAGGCGAACCCCAGGCCTTCCCTTTGCTCAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTGTCAATGGGGAGAAGGCGAACCCCAGGCCTTCCCTTTGCTCAT  894

seq1  TTGGTAATAGGAGTTTAAACAGCTGTATTACATCTATGTCATGAGGACCC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAATAGGAGTTTAAACAGCTGTATTACATCTATGTCATGAGGACCC  944

seq1  TAGGGCTTAAAAGTGAGTAGTGACCTCTGCCAATCTCTCTCTCTCTCTCT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTTAAAAGTGAGTAGTGACCTCTGCCAATCTCTCTCTCTCTCTCT  994

seq1  CCTCTCATCATCATCATCATCTATATAATGTTATGTAGCTTCCTGAATGG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCATCATCATCATCATCTATATAATGTTATGTAGCTTCCTGAATGG  1044

seq1  AGGGAGAACATTCAAAGTCAGTCTACAGGCACACATGAATTCTGAACAGA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAACATTCAAAGTCAGTCTACAGGCACACATGAATTCTGAACAGA  1094

seq1  TCTTTCAGCTTTGAAAGCTATGATTTTCATGCATATGACTCATGAATTC  1141
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAGCTTTGAAAGCTATGATTTTCATGCATATGACTCATGAATTC  1143