BAC Information

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BAC

Clone NameB6Ng01-243P09
Chromosome12 (Build37)
Map Location 64,397,846 - 64,398,892
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC622746, LOC100040438, 1700047L15Rik, Tspyl-ps, EG665741, EG382606
Downstream geneLOC435302
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243P09.bB6Ng01-243P09.g
ACCGA053211GA053212
length1,2241,102
definitionB6Ng01-243P09.b B6Ng01-243P09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttacctgaggaataccaaaaggatgagaagcacctgaaaaactg
ttcaacatccttaatcatcagaaaaatgcaaatcaaaacaaccctgagat
tctacctcactccagtcagaatggctaagataaaaaattcaggtgacagc
agatgctggagaggatgtggagaaagaggaacactcctctattgttggtg
ggattgcaagcttgtacaaccactctagaaatcagtctggcggttcttca
gaaaattggacatagtactaccggaggatcctcaatacctcccctgggca
tatatccagaagatgttccaactggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaacgaacccagatg
tcctcaacagaggaacggatacagaaaatgtggtacatttacacaatgga
gtactactcagctattaaaaagaatgagtttatgaaattcttagggaatt
ggatggacttggagggcatcatcctgagtgaggtaacccaatcacaaaag
aactcaaacaatatatagtcactgataagtggatattagcccagaaagtt
agaatacccaagatataagatacaatttggtacacacataaaactcaaga
agaaggaagaccaaagtgtggacactttgccacttcttagaattgggaac
agaacacccattgaaggcgttacaaagataaagtttggagctgagatgaa
agaatggaccatctagagactgccatatccagggatccatcccataatca
gcttccaaaggctgtcaccatttcatacactaggaagattttgctgaaag
gacccagatatagctgtctcttttgagactatgccggggcctagcaaaca
cagaagtggatgctcacattcagctttttgatagattacagggcccccaa
aggaggagctagagaaagtaacccaagaagctaaagggatctgcaaccct
ataggtgaaacaacaatatgaactaaccagtacactcggagcttgtgtct
tctagctgcatatgtatcaggagatggctatttggccatcagttgaagaa
gaggctcatgtttgtgcaattttatatggctcagtatgggggaggaccat
ggcaaaagtggatttggagtgggaagcgtgtgggggaaacatttggggag
agcacctatcgtgagctcaatact

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtactaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatcaagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaggacatgtctttctgcga
tagagacacttgctaaactatgctcattgcttctctattcataataaccg
gaaattggaaccaacctatatgtccatcaactgaagagcaaatgaaatga
ggtgcatttatacaatggaatctttttcagcaattacaaaaagattaatc
caaatggaattcaaatagatagtcatgtggtgatgtggaatggaagaatc
aagctgggaggggaaaggaaaagggacaaaagaggtaatatggggagaga
gagaacgaacattaagtaagagttgtgtaagtgttgggagccgcccccac
attcgccgtcacaagatggccctgacatcctgtgttctaagtggtaaaca
aataatctgcgcatgtgccaagggtatttttccactacatgtactctgcc
tttcccgtgacatcaactcggccatgggctgcagccaatcaaggagtgat
gcgtcctaggcgaagataattctccttaaaggggacggggtttccgccat
tctctctcttgcttgcgctctgcgctttgctctctggctctggctctgct
cgcttgctctaaagatgtaaacatagagctcttgctctgcgctctgcgct
ctgccgcttgcgctctagcgcgctggcgctctgcttctaagatgtaagcc
gggggcttcgttttgggctgggacttgcctctgcctctgaagatgtaagc
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_64397846_64398892
seq2: B6Ng01-243P09.g_141_1168

seq1  AATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGG  50

seq1  CTAAGATGAAAAATTCAGGTGACAGCAGATGCTGGTGTGGATGTGGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATGAAAAATTCAGGTGACAGCAGATGCTGGTGTGGATGTGGAGAA  100

seq1  AGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACTACCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACTACCACT  150

seq1  CTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGG  200

seq1  AGGATCCAGCAATACCTCTCCTGGGCATATATCAAGAAGATGCCCCAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCAGCAATACCTCTCCTGGGCATATATCAAGAAGATGCCCCAACT  250

seq1  GGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAAT  300

seq1  AGCCAGAAGGACATGTCTTTCTGCGATAGAGACACTTGCTAAACTATGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAAGGACATGTCTTTCTGCGATAGAGACACTTGCTAAACTATGCT  350

seq1  CATTGCTTCTCTATTCATAATAACCGGAAATTGGAACCAACCTATATGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTTCTCTATTCATAATAACCGGAAATTGGAACCAACCTATATGTC  400

seq1  CATCAACTGAAGAGCAAATGAAATGAGGTGCATTTATACAATGGAATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACTGAAGAGCAAATGAAATGAGGTGCATTTATACAATGGAATCTT  450

seq1  TTTCAGCAATTACAAAAAGATTAATCCAAATGGAATTCAAATAGATAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCAATTACAAAAAGATTAATCCAAATGGAATTCAAATAGATAGTC  500

seq1  ATGTGGTGATGTGGAATGGAAGAATCAAGCTGGGAGGGGAAAGGAAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTGATGTGGAATGGAAGAATCAAGCTGGGAGGGGAAAGGAAAAGG  550

seq1  GACAAAAGAGGTAATATGGGGAGAGAGAGAACGAACATTAAGTAAGAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAGAGGTAATATGGGGAGAGAGAGAACGAACATTAAGTAAGAGTT  600

seq1  GTGTAAGTGTTGGGAGCCGCCCCCACATTCGCCGTCACAAGATGGCCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGTGTTGGGAGCCGCCCCCACATTCGCCGTCACAAGATGGCCCTG  650

seq1  ACATCCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCAAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCAAGGG  700

seq1  TATTTTTCCACTACATGTACTCTGCCTTTCCCGTGACATCAACTCGGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCCACTACATGTACTCTGCCTTTCCCGTGACATCAACTCGGCCA  750

seq1  TGGGCTGCAGCCAATCAGGGAGTGATGCGTCCTAGGCGAAGGATAATTCT  800
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  TGGGCTGCAGCCAATCAAGGAGTGATGCGTCCTAGGCGAA-GATAATTCT  799

seq1  CCTTAAAGGGGACGGGGTTTCCGCCATTCTCTCTCTTGCTTGCGCTCTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCTTAAAGGGGACGGGGTTTCCGCCATTCTCTCTCTTGCTTGCGCTC-TG  848

seq1  CGCTTTTGCTCTCTGGCTCTGGCTCTTGCTCGCTTGCTCCTAAAGATGTA  900
      ||| ||||||||||||||||||||| |||||||||||| |||||||||||
seq2  CGC-TTTGCTCTCTGGCTCTGGCTC-TGCTCGCTTGCT-CTAAAGATGTA  895

seq1  AACAATAGAGCTCTTGCTCTGCGCTCTGGCGCTCTGGCGCGCTGGCGCTC  950
      ||| ||||||||||||||||||||||| ||||||||   |||| ||||||
seq2  AAC-ATAGAGCTCTTGCTCTGCGCTCT-GCGCTCTG--CCGCTTGCGCTC  941

seq1  TGGCGCGCTGGCGCTCTGGCTCCTAAAGATGTAAGCGGGGGGCTTTTTCG  1000
      | ||||||||||||||| ||| || ||||||||||| ||||||   ||||
seq2  TAGCGCGCTGGCGCTCT-GCTTCT-AAGATGTAAGCCGGGGGC---TTCG  986

seq1  TTTTTGGGGCTTGGGGCTTGCGCTCCTGCTCCTGAAGATGTAAGCAA  1047
      ||||  |||| |||| ||||| || ||||  |||||||||||||| |
seq2  TTTT--GGGC-TGGGACTTGC-CT-CTGCCTCTGAAGATGTAAGCGA  1028


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