BAC Information

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BAC

Clone NameB6Ng01-248D04
Chromosome12 (Build37)
Map Location 26,040,381 - 26,041,522
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668711, EG668714, LOC629364, Taf1b, Grhl1, EG629383, Klf11, Cys1, Rrm2, LOC668719, Mboat2, EG629397, C330002I19Rik, Id2
Downstream geneLOC100042973, LOC100042974, LOC668726, Rnf144
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248D04.bB6Ng01-248D04.g
ACCGA056334GA056335
length1,1741,145
definitionB6Ng01-248D04.b B6Ng01-248D04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggtagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagttttttttttttttttttttttttttttattttga
agcagggtaattggctgaacctggagctcaccaattcagcaaaactgctt
ggccagtgagctctgtcttgactttcttttgtctgaggacagaagctaaa
tgacattcattcaacaaggcgtgagtttactctgttctcactttgtactg
gctagattcttatgtcaacttgatacaggcttgaatctttgggaagagag
agaacaccaattgaggaaatgcacccaccaggttggcctgtacatgagcc
tgtgagatactatcttaactagtgattgatgtgagaggaaccaggccatt
gtgagtagtgccattcctgacaggtagttctgaggtctataagaaagcag
gctgacaagccatagggaacaagccagtaggcagtgctcctgcagagtct
aggcatcagctcttgcctctgggttctgtactgcttgagtttctactctg
acctccttcagtgatgatgtgaaactgtgagtgaagtaaggcctttcctt
cccaggttgcttttggtcatggtgtttgatcataacatagaaaccctaac
taactaaggatccattgaagttgcagaccattttcctgggtgcccccact
tcatttcctggttagctctttttgcctcatccctcggcccatccatagga
accatgggaggtactccaatgcagtggagggtaatagccacaggatcata
acatattcctatcaaacacaaaaaccagagccacggggctgggtggggaa
ggtttaataaccctatctaattggtttataatttctaccatttcatgacc
caggccacctggtttattggaaatggacacaaacctttcaacaatgtgta
aagggggtgtgggaggattaggtg
gaattctgctgcatccttcccaaaccctcacattgactcaaggtctaatc
atgtaagtgaggataaactgtcctgtaggatgcttaatttagttacaacc
accaagtccctttggatgctaagtgtggtggttcatcttcattgtcaacg
tgactggatttagaatcacctaggagacacacctctgggtacatctgtga
gggcatatccagagagggtgatttgaggagggaaggttaatctgatttgg
gtagcatcatgacatgggctggagtctctcccatagaaaggggaaagtga
actggctaccacactctatctctctctgcttcctgtgtatatgaccagct
tcctcatggtccatctcggtcatgatagactagaccttccactgctgagc
caatctttttctttcttgtaggttgattttgtcaagtagtgaaaacagca
atacacagaataacccagacatggtaagatgctaagggttaggattggaa
aagttgttcactggacctcagggaccaaagatggtgacaagatgcaagga
gggtgctgtcagggtcctgcatcccagtggggagagtagactggaggctg
gaagaaggtaaggtctggtctacatctactggtcaccgaggaacaaggag
gggacatctaggtttcttgcttggatgtgatagataaaataatgactgaa
atattccaagtgtctgcttcccaactaataatgagtacaaattccagaat
tgtctataatttttaagatctgtgacaatgaaagaactgataattgtaaa
acaggtttagcaccggattgtctacactgattttgcccaaatcattaata
agcaaatggaccagcagctgctgcagccttgtaagcaagctgttctgaat
tgcttttgaagaaaaagtaaaagaagactcataacaatgaagactgaagg
tgtttcctttagagttagttgtttttttttttgttttgtttattatttat
tgtgtttccaggtgttttctagaagagactgcatctttagattgaacagc
cttctcctgttcaaagcttaagagctgagctcagatcaatagcgttgatt
taaaatggatgtgcatcattagctgggtgttttccactggcctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_26040381_26041522
seq2: B6Ng01-248D04.g_66_1210

seq1  GAATTCTGCTGCATCCTTCCCAAACCCTCACATTGACTCAAGGTCTAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTGCATCCTTCCCAAACCCTCACATTGACTCAAGGTCTAATC  50

seq1  ATGTAAGTGAGGATAAACTGTCCTGTAGGATGCTTAATTTAGTTACAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGTGAGGATAAACTGTCCTGTAGGATGCTTAATTTAGTTACAACC  100

seq1  ACCAAGTCCCTTTGGATGCTAAGTGTGGTGGTTCATCTTCATTGTCAACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTCCCTTTGGATGCTAAGTGTGGTGGTTCATCTTCATTGTCAACG  150

seq1  TGACTGGATTTAGAATCACCTAGGAGACACACCTCTGGGTACATCTGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGGATTTAGAATCACCTAGGAGACACACCTCTGGGTACATCTGTGA  200

seq1  GGGCATATCCAGAGAGGGTGATTTGAGGAGGGAAGGTTAATCTGATTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATATCCAGAGAGGGTGATTTGAGGAGGGAAGGTTAATCTGATTTGG  250

seq1  GTAGCATCATGACATGGGCTGGAGTCTCTCCCATAGAAAGGGGAAAGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCATCATGACATGGGCTGGAGTCTCTCCCATAGAAAGGGGAAAGTGA  300

seq1  ACTGGCTACCACACTCTATCTCTCTCTGCTTCCTGTGTATATGACCAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTACCACACTCTATCTCTCTCTGCTTCCTGTGTATATGACCAGCT  350

seq1  TCCTCATGGTCCATCTCGGTCATGATAGACTAGACCTTCCACTGCTGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATGGTCCATCTCGGTCATGATAGACTAGACCTTCCACTGCTGAGC  400

seq1  CAATCTTTTTCTTTCTTGTAGGTTGATTTTGTCAAGTAGTGAAAACAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTTTTCTTTCTTGTAGGTTGATTTTGTCAAGTAGTGAAAACAGCA  450

seq1  ATACACAGAATAACCCAGACATGGTAAGATGCTAAGGGTTAGGATTGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAGAATAACCCAGACATGGTAAGATGCTAAGGGTTAGGATTGGAA  500

seq1  AAGTTGTTCACTGGACCTCAGGGACCAAAGATGGTGACAAGATGCAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTTCACTGGACCTCAGGGACCAAAGATGGTGACAAGATGCAAGGA  550

seq1  GGGTGCTGTCAGGGTCCTGCATCCCAGTGGGGAGAGTAGACTGGAGGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTGTCAGGGTCCTGCATCCCAGTGGGGAGAGTAGACTGGAGGCTG  600

seq1  GAAGAAGGTAAGGTCTGGTCTACATCTACTGGTCACCGAGGAACAAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGTAAGGTCTGGTCTACATCTACTGGTCACCGAGGAACAAGGAG  650

seq1  GGGACATCTAGGTTTCTTGCTTGGATGTGATAGATAAAATAATGACTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACATCTAGGTTTCTTGCTTGGATGTGATAGATAAAATAATGACTGAA  700

seq1  ATATTCCAAGTGTCTGCTTCCCAACTAATAATGAGTACAAATTCCAGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCAAGTGTCTGCTTCCCAACTAATAATGAGTACAAATTCCAGAAT  750

seq1  TGTCTATAATTTTTAAGATCTGTGACAATGAAAGAACTGATAATTGT-AA  799
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGTCTATAATTTTTAAGATCTGTGACAATGAAAGAACTGATAATTGTAAA  800

seq1  ACAGG-TTAGCACCGGATTGTCTACACTGATTTTGCCCAAATCATTAATA  848
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTTAGCACCGGATTGTCTACACTGATTTTGCCCAAATCATTAATA  850

seq1  AGCAAATGGACCAGCAGCTGCTGCAGCCTTGTAAGCAAGCTGTTCTGAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATGGACCAGCAGCTGCTGCAGCCTTGTAAGCAAGCTGTTCTGAAT  900

seq1  TGCTTTTGA--GAAAAGTAAAAGAAGACTCATAACAATGAAGACTGAAGG  946
      |||||||||   ||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTGAAGAAAAAGTAAAAGAAGACTCATAACAATGAAGACTGAAGG  950

seq1  TGTT--CCTTAGAGTTAGTTTGTTTTTTTTTTGTTTTTGTTTATTTATTT  994
      ||||  | |||||||||| |||||||||||||  ||||||||| ||||||
seq2  TGTTTCCTTTAGAGTTAG-TTGTTTTTTTTTTTGTTTTGTTTA-TTATTT  998

seq1  A-TGTGTTTCCAGGTGTTTTCT---AGAGACTGCATC-TTAGAATGAACA  1039
      | ||||||||||||||||||||   |||||||||||| ||||| ||||||
seq2  ATTGTGTTTCCAGGTGTTTTCTAGAAGAGACTGCATCTTTAGATTGAACA  1048

seq1  G-CTTCCTCTGTTCAAAAAGCTAAAGAGCTGAGCTCAGATCAATTAAACC  1088
      | ||||  ||||||  |||||| |||||||||||||||||||||   | |
seq2  GCCTTCTCCTGTTC--AAAGCTTAAGAGCTGAGCTCAGATCAAT---AGC  1093

seq1  CTTTAATTTAAAAATTGATGTGGCATCATTAGCTGTGTGTTTTCCACT-G  1137
       || |  || ||||| ||||| ||||||||||||| |||||||||||| |
seq2  GTTGA--TTTAAAATGGATGT-GCATCATTAGCTGGGTGTTTTCCACTGG  1140

seq1  CCTGA  1142
      |||||
seq2  CCTGA  1145